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Items: 20

1.

Four millennia of Iberian biomolecular prehistory illustrate the impact of prehistoric migrations at the far end of Eurasia.

Valdiosera C, Günther T, Vera-Rodríguez JC, Ureña I, Iriarte E, Rodríguez-Varela R, Simões LG, Martínez-Sánchez RM, Svensson EM, Malmström H, Rodríguez L, Bermúdez de Castro JM, Carbonell E, Alday A, Hernández Vera JA, Götherström A, Carretero JM, Arsuaga JL, Smith CI, Jakobsson M.

Proc Natl Acad Sci U S A. 2018 Mar 27;115(13):3428-3433. doi: 10.1073/pnas.1717762115. Epub 2018 Mar 12.

2.

Population genomics of Mesolithic Scandinavia: Investigating early postglacial migration routes and high-latitude adaptation.

Günther T, Malmström H, Svensson EM, Omrak A, Sánchez-Quinto F, Kılınç GM, Krzewińska M, Eriksson G, Fraser M, Edlund H, Munters AR, Coutinho A, Simões LG, Vicente M, Sjölander A, Jansen Sellevold B, Jørgensen R, Claes P, Shriver MD, Valdiosera C, Netea MG, Apel J, Lidén K, Skar B, Storå J, Götherström A, Jakobsson M.

PLoS Biol. 2018 Jan 9;16(1):e2003703. doi: 10.1371/journal.pbio.2003703. eCollection 2018 Jan.

3.

Genomic Analyses of Pre-European Conquest Human Remains from the Canary Islands Reveal Close Affinity to Modern North Africans.

Rodríguez-Varela R, Günther T, Krzewińska M, Storå J, Gillingwater TH, MacCallum M, Arsuaga JL, Dobney K, Valdiosera C, Jakobsson M, Götherström A, Girdland-Flink L.

Curr Biol. 2017 Nov 6;27(21):3396-3402.e5. doi: 10.1016/j.cub.2017.09.059. Epub 2017 Oct 26.

4.

Ancient individuals from the North American Northwest Coast reveal 10,000 years of regional genetic continuity.

Lindo J, Achilli A, Perego UA, Archer D, Valdiosera C, Petzelt B, Mitchell J, Worl R, Dixon EJ, Fifield TE, Rasmussen M, Willerslev E, Cybulski JS, Kemp BM, DeGiorgio M, Malhi RS.

Proc Natl Acad Sci U S A. 2017 Apr 18;114(16):4093-4098. doi: 10.1073/pnas.1620410114. Epub 2017 Apr 4.

5.

Comparing ancient DNA survival and proteome content in 69 archaeological cattle tooth and bone samples from multiple European sites.

Wadsworth C, Procopio N, Anderung C, Carretero JM, Iriarte E, Valdiosera C, Elburg R, Penkman K, Buckley M.

J Proteomics. 2017 Mar 31;158:1-8. doi: 10.1016/j.jprot.2017.01.004. Epub 2017 Jan 14.

6.

Ancient mitochondrial DNA provides high-resolution time scale of the peopling of the Americas.

Llamas B, Fehren-Schmitz L, Valverde G, Soubrier J, Mallick S, Rohland N, Nordenfelt S, Valdiosera C, Richards SM, Rohrlach A, Romero MI, Espinoza IF, Cagigao ET, Jiménez LW, Makowski K, Reyna IS, Lory JM, Torrez JA, Rivera MA, Burger RL, Ceruti MC, Reinhard J, Wells RS, Politis G, Santoro CM, Standen VG, Smith C, Reich D, Ho SY, Cooper A, Haak W.

Sci Adv. 2016 Apr 1;2(4):e1501385. doi: 10.1126/sciadv.1501385. eCollection 2016 Apr.

7.

Genomic Evidence Establishes Anatolia as the Source of the European Neolithic Gene Pool.

Omrak A, Günther T, Valdiosera C, Svensson EM, Malmström H, Kiesewetter H, Aylward W, Storå J, Jakobsson M, Götherström A.

Curr Biol. 2016 Jan 25;26(2):270-275. doi: 10.1016/j.cub.2015.12.019. Epub 2015 Dec 31.

8.

Ancient genomes link early farmers from Atapuerca in Spain to modern-day Basques.

Günther T, Valdiosera C, Malmström H, Ureña I, Rodriguez-Varela R, Sverrisdóttir ÓO, Daskalaki EA, Skoglund P, Naidoo T, Svensson EM, Bermúdez de Castro JM, Carbonell E, Dunn M, Storå J, Iriarte E, Arsuaga JL, Carretero JM, Götherström A, Jakobsson M.

Proc Natl Acad Sci U S A. 2015 Sep 22;112(38):11917-22. doi: 10.1073/pnas.1509851112. Epub 2015 Sep 8.

9.

POPULATION GENETICS. Genomic evidence for the Pleistocene and recent population history of Native Americans.

Raghavan M, Steinrücken M, Harris K, Schiffels S, Rasmussen S, DeGiorgio M, Albrechtsen A, Valdiosera C, Ávila-Arcos MC, Malaspinas AS, Eriksson A, Moltke I, Metspalu M, Homburger JR, Wall J, Cornejo OE, Moreno-Mayar JV, Korneliussen TS, Pierre T, Rasmussen M, Campos PF, de Barros Damgaard P, Allentoft ME, Lindo J, Metspalu E, Rodríguez-Varela R, Mansilla J, Henrickson C, Seguin-Orlando A, Malmström H, Stafford T Jr, Shringarpure SS, Moreno-Estrada A, Karmin M, Tambets K, Bergström A, Xue Y, Warmuth V, Friend AD, Singarayer J, Valdes P, Balloux F, Leboreiro I, Vera JL, Rangel-Villalobos H, Pettener D, Luiselli D, Davis LG, Heyer E, Zollikofer CPE, Ponce de León MS, Smith CI, Grimes V, Pike KA, Deal M, Fuller BT, Arriaza B, Standen V, Luz MF, Ricaut F, Guidon N, Osipova L, Voevoda MI, Posukh OL, Balanovsky O, Lavryashina M, Bogunov Y, Khusnutdinova E, Gubina M, Balanovska E, Fedorova S, Litvinov S, Malyarchuk B, Derenko M, Mosher MJ, Archer D, Cybulski J, Petzelt B, Mitchell J, Worl R, Norman PJ, Parham P, Kemp BM, Kivisild T, Tyler-Smith C, Sandhu MS, Crawford M, Villems R, Smith DG, Waters MR, Goebel T, Johnson JR, Malhi RS, Jakobsson M, Meltzer DJ, Manica A, Durbin R, Bustamante CD, Song YS, Nielsen R, Willerslev E.

Science. 2015 Aug 21;349(6250):aab3884. doi: 10.1126/science.aab3884. Epub 2015 Jul 21.

10.

The ancestry and affiliations of Kennewick Man.

Rasmussen M, Sikora M, Albrechtsen A, Korneliussen TS, Moreno-Mayar JV, Poznik GD, Zollikofer CPE, de León MP, Allentoft ME, Moltke I, Jónsson H, Valdiosera C, Malhi RS, Orlando L, Bustamante CD, Stafford TW Jr, Meltzer DJ, Nielsen R, Willerslev E.

Nature. 2015 Jul 23;523(7561):455-458. doi: 10.1038/nature14625.

11.

bammds: a tool for assessing the ancestry of low-depth whole-genome data using multidimensional scaling (MDS).

Malaspinas AS, Tange O, Moreno-Mayar JV, Rasmussen M, DeGiorgio M, Wang Y, Valdiosera CE, Politis G, Willerslev E, Nielsen R.

Bioinformatics. 2014 Oct 15;30(20):2962-4. doi: 10.1093/bioinformatics/btu410. Epub 2014 Jun 28.

12.

Genomic diversity and admixture differs for Stone-Age Scandinavian foragers and farmers.

Skoglund P, Malmström H, Omrak A, Raghavan M, Valdiosera C, Günther T, Hall P, Tambets K, Parik J, Sjögren KG, Apel J, Willerslev E, Storå J, Götherström A, Jakobsson M.

Science. 2014 May 16;344(6185):747-50. doi: 10.1126/science.1253448. Epub 2014 Apr 24.

13.

Pulling out the 1%: whole-genome capture for the targeted enrichment of ancient DNA sequencing libraries.

Carpenter ML, Buenrostro JD, Valdiosera C, Schroeder H, Allentoft ME, Sikora M, Rasmussen M, Gravel S, Guillén S, Nekhrizov G, Leshtakov K, Dimitrova D, Theodossiev N, Pettener D, Luiselli D, Sandoval K, Moreno-Estrada A, Li Y, Wang J, Gilbert MT, Willerslev E, Greenleaf WJ, Bustamante CD.

Am J Hum Genet. 2013 Nov 7;93(5):852-64. doi: 10.1016/j.ajhg.2013.10.002. Epub 2013 Oct 25.

14.

Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments.

Dabney J, Knapp M, Glocke I, Gansauge MT, Weihmann A, Nickel B, Valdiosera C, García N, Pääbo S, Arsuaga JL, Meyer M.

Proc Natl Acad Sci U S A. 2013 Sep 24;110(39):15758-63. doi: 10.1073/pnas.1314445110. Epub 2013 Sep 9.

15.

50,000 years of genetic uniformity in the critically endangered Iberian lynx.

Rodríguez R, Ramírez O, Valdiosera CE, García N, Alda F, Madurell-Malapeira J, Marmi J, Doadrio I, Willerslev E, Götherström A, Arsuaga JL, Thomas MG, Lalueza-Fox C, Dalén L.

Mol Ecol. 2011 Sep;20(18):3785-95. doi: 10.1111/j.1365-294X.2011.05231.x. Epub 2011 Aug 22.

PMID:
21864323
16.

Ancient hybridization and an Irish origin for the modern polar bear matriline.

Edwards CJ, Suchard MA, Lemey P, Welch JJ, Barnes I, Fulton TL, Barnett R, O'Connell TC, Coxon P, Monaghan N, Valdiosera CE, Lorenzen ED, Willerslev E, Baryshnikov GF, Rambaut A, Thomas MG, Bradley DG, Shapiro B.

Curr Biol. 2011 Aug 9;21(15):1251-8. doi: 10.1016/j.cub.2011.05.058. Epub 2011 Jul 7.

17.

Surprising migration and population size dynamics in ancient Iberian brown bears (Ursus arctos).

Valdiosera CE, García-Garitagoitia JL, Garcia N, Doadrio I, Thomas MG, Hänni C, Arsuaga JL, Barnes I, Hofreiter M, Orlando L, Götherström A.

Proc Natl Acad Sci U S A. 2008 Apr 1;105(13):5123-8. doi: 10.1073/pnas.0712223105. Epub 2008 Mar 17.

18.

Staying out in the cold: glacial refugia and mitochondrial DNA phylogeography in ancient European brown bears.

Valdiosera CE, García N, Anderung C, Dalén L, Crégut-Bonnoure E, Kahlke RD, Stiller M, Brandström M, Thomas MG, Arsuaga JL, Götherström A, Barnes I.

Mol Ecol. 2007 Dec;16(24):5140-8. Epub 2007 Nov 21.

PMID:
18031475
19.

Ancient DNA reveals lack of postglacial habitat tracking in the arctic fox.

Dalén L, Nyström V, Valdiosera C, Germonpré M, Sablin M, Turner E, Angerbjörn A, Arsuaga JL, Götherström A.

Proc Natl Acad Sci U S A. 2007 Apr 17;104(16):6726-9. Epub 2007 Apr 9.

20.

Typing single polymorphic nucleotides in mitochondrial DNA as a way to access Middle Pleistocene DNA.

Valdiosera C, García N, Dalén L, Smith C, Kahlke RD, Lidén K, Angerbjörn A, Arsuaga JL, Götherström A.

Biol Lett. 2006 Dec 22;2(4):601-3.

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