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Items: 16


Deciphering Genetic Factors that Determine Melon Fruit-Quality Traits Using RNA-Seq-Based High-Resolution QTL and eQTL Mapping.

Galpaz N, Gonda I, Shem-Tov D, Barad O, Tzuri G, Lev S, Fei Z, Xu Y, Lombardi N, Mao L, Jiao C, Harel-Beja R, Doron-Faigenboim A, Tzfadia O, Bar E, Meir A, Sa'ar U, Fait A, Halperin E, Kenigswald M, Fallik E, Kol G, Ronen G, Burger Y, Gur A, Tadmor Y, Portnoy V, Schaffer AA, Lewinsohn E, Giovannoni JJ, Katzir N.

Plant J. 2018 Jan 31. doi: 10.1111/tpj.13838. [Epub ahead of print]


T-DNA-genome junctions form early after infection and are influenced by the chromatin state of the host genome.

Shilo S, Tripathi P, Melamed-Bessudo C, Tzfadia O, Muth TR, Levy AA.

PLoS Genet. 2017 Jul 24;13(7):e1006875. doi: 10.1371/journal.pgen.1006875. eCollection 2017 Jul.


MYB107 and MYB9 Homologs Regulate Suberin Deposition in Angiosperms.

Lashbrooke JG, Cohen H, Levy-Samocha D, Tzfadia O, Panizel I, Zeisler V, Massalha H, Stern A, Trainotti L, Schreiber L, Costa F, Aharoni A.

Plant Cell. 2016 Sep 7. pii: tpc.00490.2016. [Epub ahead of print]


Characterization of a New Pink-Fruited Tomato Mutant Results in the Identification of a Null Allele of the SlMYB12 Transcription Factor.

Fernandez-Moreno JP, Tzfadia O, Forment J, Presa S, Rogachev I, Meir S, Orzaez D, Aharoni A, Granell A.

Plant Physiol. 2016 Jul;171(3):1821-36. doi: 10.1104/pp.16.00282. Epub 2016 May 6.


hfAIM: A reliable bioinformatics approach for in silico genome-wide identification of autophagy-associated Atg8-interacting motifs in various organisms.

Xie Q, Tzfadia O, Levy M, Weithorn E, Peled-Zehavi H, Van Parys T, Van de Peer Y, Galili G.

Autophagy. 2016 May 3;12(5):876-87. doi: 10.1080/15548627.2016.1147668. Epub 2016 Apr 12.


CoExpNetViz: Comparative Co-Expression Networks Construction and Visualization Tool.

Tzfadia O, Diels T, De Meyer S, Vandepoele K, Aharoni A, Van de Peer Y.

Front Plant Sci. 2016 Jan 5;6:1194. doi: 10.3389/fpls.2015.01194. eCollection 2015.


The MORPH-R web server and software tool for predicting missing genes in biological pathways.

Amar D, Frades I, Diels T, Zaltzman D, Ghatan N, Hedley PE, Alexandersson E, Tzfadia O, Shamir R.

Physiol Plant. 2015 Sep;155(1):12-20. doi: 10.1111/ppl.12326. Epub 2015 Feb 24.


Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case.

Amar D, Frades I, Danek A, Goldberg T, Sharma SK, Hedley PE, Proux-Wera E, Andreasson E, Shamir R, Tzfadia O, Alexandersson E.

BMC Plant Biol. 2014 Dec 5;14:329. doi: 10.1186/s12870-014-0329-9.


Combined correlation-based network and mQTL analyses efficiently identified loci for branched-chain amino acid, serine to threonine, and proline metabolism in tomato seeds.

Toubiana D, Batushansky A, Tzfadia O, Scossa F, Khan A, Barak S, Zamir D, Fernie AR, Nikoloski Z, Fait A.

Plant J. 2015 Jan;81(1):121-33. doi: 10.1111/tpj.12717. Epub 2014 Dec 16. Erratum in: Plant J. 2015 Nov;84(4):845.


Rewiring Host Lipid Metabolism by Large Viruses Determines the Fate of Emiliania huxleyi, a Bloom-Forming Alga in the Ocean.

Rosenwasser S, Mausz MA, Schatz D, Sheyn U, Malitsky S, Aharoni A, Weinstock E, Tzfadia O, Ben-Dor S, Feldmesser E, Pohnert G, Vardi A.

Plant Cell. 2014 Jun;26(6):2689-2707. Epub 2014 Jun 10.


Mapping the diatom redox-sensitive proteome provides insight into response to nitrogen stress in the marine environment.

Rosenwasser S, Graff van Creveld S, Schatz D, Malitsky S, Tzfadia O, Aharoni A, Levin Y, Gabashvili A, Feldmesser E, Vardi A.

Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2740-5. doi: 10.1073/pnas.1319773111. Epub 2014 Feb 3.


Biosynthesis of antinutritional alkaloids in solanaceous crops is mediated by clustered genes.

Itkin M, Heinig U, Tzfadia O, Bhide AJ, Shinde B, Cardenas PD, Bocobza SE, Unger T, Malitsky S, Finkers R, Tikunov Y, Bovy A, Chikate Y, Singh P, Rogachev I, Beekwilder J, Giri AP, Aharoni A.

Science. 2013 Jul 12;341(6142):175-9. doi: 10.1126/science.1240230. Epub 2013 Jun 20.


The MORPH algorithm: ranking candidate genes for membership in Arabidopsis and tomato pathways.

Tzfadia O, Amar D, Bradbury LM, Wurtzel ET, Shamir R.

Plant Cell. 2012 Nov;24(11):4389-406. doi: 10.1105/tpc.112.104513. Epub 2012 Nov 30.


Lycopene cyclase paralog CruP protects against reactive oxygen species in oxygenic photosynthetic organisms.

Bradbury LM, Shumskaya M, Tzfadia O, Wu SB, Kennelly EJ, Wurtzel ET.

Proc Natl Acad Sci U S A. 2012 Jul 3;109(27):E1888-97. doi: 10.1073/pnas.1206002109. Epub 2012 Jun 15.


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