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Genome-wide mapping of transcriptional enhancer candidates using DNA and chromatin features in maize.

Oka R, Zicola J, Weber B, Anderson SN, Hodgman C, Gent JI, Wesselink JJ, Springer NM, Hoefsloot HCJ, Turck F, Stam M.

Genome Biol. 2017 Jul 21;18(1):137. doi: 10.1186/s13059-017-1273-4.


Ctf4-related protein recruits LHP1-PRC2 to maintain H3K27me3 levels in dividing cells in Arabidopsis thaliana.

Zhou Y, Tergemina E, Cui H, Förderer A, Hartwig B, Velikkakam James G, Schneeberger K, Turck F.

Proc Natl Acad Sci U S A. 2017 May 2;114(18):4833-4838. doi: 10.1073/pnas.1620955114. Epub 2017 Apr 20.


H2A monoubiquitination in Arabidopsis thaliana is generally independent of LHP1 and PRC2 activity.

Zhou Y, Romero-Campero FJ, Gómez-Zambrano Á, Turck F, Calonje M.

Genome Biol. 2017 Apr 12;18(1):69. doi: 10.1186/s13059-017-1197-z.


The OCarePlatform: A context-aware system to support independent living.

De Backere F, Bonte P, Verstichel S, Ongenae F, De Turck F.

Comput Methods Programs Biomed. 2017 Mar;140:111-120. doi: 10.1016/j.cmpb.2016.11.008. Epub 2016 Nov 18.


Sharing health data in Belgium: A home care case study using the Vitalink platform.

De Backere F, Bonte P, Verstichel S, Ongenae F, De Turck F.

Inform Health Soc Care. 2018 Jan;43(1):56-72. doi: 10.1080/17538157.2016.1269107. Epub 2017 Jan 13.


Social-aware Event Handling within the FallRisk Project.

De Backere F, Van den Bergh J, Coppers S, Elprama S, Nelis J, Verstichel S, Jacobs A, Coninx K, Ongenae F, De Turck F.

Methods Inf Med. 2017 Jan 9;56(1):63-73. doi: 10.3414/ME15-02-0010. Epub 2016 Dec 6.


The Arabidopsis Polycomb Repressive Complex 1 (PRC1) Components AtBMI1A, B, and C Impact Gene Networks throughout All Stages of Plant Development.

Merini W, Romero-Campero FJ, Gomez-Zambrano A, Zhou Y, Turck F, Calonje M.

Plant Physiol. 2017 Jan;173(1):627-641. doi: 10.1104/pp.16.01259. Epub 2016 Nov 9.


Random Survival Forests for Predicting the Bed Occupancy in the Intensive Care Unit.

Ruyssinck J, van der Herten J, Houthooft R, Ongenae F, Couckuyt I, Gadeyne B, Colpaert K, Decruyenaere J, De Turck F, Dhaene T.

Comput Math Methods Med. 2016;2016:7087053. Epub 2016 Oct 13.


Meta-analysis of Genome-Wide Chromatin Data.

Engelhorn J, Turck F.

Methods Mol Biol. 2017;1456:33-50.


Correction: Kicking against the PRCs--A Domesticated Transposase Antagonises Silencing Mediated by Polycomb Group Proteins and Is an Accessory Component of Polycomb Repressive Complex 2.

Liang SC, Hartwig B, Perera P, Mora-García S, de Leau E, Thornton H, de Lima Alves F, Rappsilber J, Yang S, James GV, Schneeberger K, Finnegan EJ, Turck F, Goodrich J.

PLoS Genet. 2016 Feb 19;12(2):e1005812. doi: 10.1371/journal.pgen.1005812. eCollection 2016 Feb. No abstract available.


Intelligent task management platform for health care workers.

Ongenae F, Vanhove T, De Backere F, De Turck F.

Inform Health Soc Care. 2017 Mar;42(2):122-134. doi: 10.3109/17538157.2015.1113178. Epub 2016 Feb 18.


The age of multiplexity: recruitment and interactions of Polycomb complexes in plants.

Förderer A, Zhou Y, Turck F.

Curr Opin Plant Biol. 2016 Feb;29:169-78. doi: 10.1016/j.pbi.2015.11.010. Epub 2016 Jan 28. Review.


Complementary Activities of TELOMERE REPEAT BINDING Proteins and Polycomb Group Complexes in Transcriptional Regulation of Target Genes.

Zhou Y, Hartwig B, James GV, Schneeberger K, Turck F.

Plant Cell. 2016 Jan;28(1):87-101. doi: 10.1105/tpc.15.00787. Epub 2015 Dec 31.


Kicking against the PRCs - A Domesticated Transposase Antagonises Silencing Mediated by Polycomb Group Proteins and Is an Accessory Component of Polycomb Repressive Complex 2.

Liang SC, Hartwig B, Perera P, Mora-García S, de Leau E, Thornton H, de Lima Alves F, Rappsilber J, Yang S, James GV, Schneeberger K, Finnegan EJ, Turck F, Goodrich J.

PLoS Genet. 2015 Dec 7;11(12):e1005660. doi: 10.1371/journal.pgen.1005660. eCollection 2015 Dec. Erratum in: PLoS Genet. 2016 Feb;12(2):e1005812. de Alves, Flavia Lima [corrected to de Lima Alves, Flavia]; Rapsilber, Juri [corrected to Rappsilber, Juri].


Molecular memories in the regulation of seasonal flowering: from competence to cessation.

Bratzel F, Turck F.

Genome Biol. 2015 Sep 15;16:192. doi: 10.1186/s13059-015-0770-6. Review.


The arabidopsis DNA polymerase δ has a role in the deposition of transcriptionally active epigenetic marks, development and flowering.

Iglesias FM, Bruera NA, Dergan-Dylon S, Marino-Buslje C, Lorenzi H, Mateos JL, Turck F, Coupland G, Cerdán PD.

PLoS Genet. 2015 Feb 18;11(2):e1004975. doi: 10.1371/journal.pgen.1004975. eCollection 2015 Feb. Erratum in: PLoS Genet. 2015 Jun;11(6):e1005318.


Role of an electronic antimicrobial alert system in intensive care in dosing errors and pharmacist workload.

Claus BO, Colpaert K, Steurbaut K, De Turck F, Vogelaers DP, Robays H, Decruyenaere J.

Int J Clin Pharm. 2015 Apr;37(2):387-94. doi: 10.1007/s11096-015-0075-6. Epub 2015 Feb 10.


Predictive modelling of survival and length of stay in critically ill patients using sequential organ failure scores.

Houthooft R, Ruyssinck J, van der Herten J, Stijven S, Couckuyt I, Gadeyne B, Ongenae F, Colpaert K, Decruyenaere J, Dhaene T, De Turck F.

Artif Intell Med. 2015 Mar;63(3):191-207. doi: 10.1016/j.artmed.2014.12.009. Epub 2014 Dec 30.


Towards a social and context-aware multi-sensor fall detection and risk assessment platform.

De Backere F, Ongenae F, Van den Abeele F, Nelis J, Bonte P, Clement E, Philpott M, Hoebeke J, Verstichel S, Ackaert A, De Turck F.

Comput Biol Med. 2015 Sep;64:307-20. doi: 10.1016/j.compbiomed.2014.12.002. Epub 2014 Dec 10.


Ambient-aware continuous care through semantic context dissemination.

Ongenae F, Famaey J, Verstichel S, De Zutter S, Latré S, Ackaert A, Verhoeve P, De Turck F.

BMC Med Inform Decis Mak. 2014 Dec 4;14:97. doi: 10.1186/1472-6947-14-97.


The OCareCloudS project: Toward organizing care through trusted cloud services.

De Backere F, Ongenae F, Vannieuwenborg F, Van Ooteghem J, Duysburgh P, Jansen A, Hoebeke J, Wuyts K, Rossey J, Van den Abeele F, Willems K, Decancq J, Annema JH, Sulmon N, Van Landuyt D, Verstichel S, Crombez P, Ackaert A, De Grooff D, Jacobs A, De Turck F.

Inform Health Soc Care. 2016;41(2):159-76. doi: 10.3109/17538157.2014.965306. Epub 2014 Oct 17.


Induced and natural variation of promoter length modulates the photoperiodic response of FLOWERING LOCUS T.

Liu L, Adrian J, Pankin A, Hu J, Dong X, von Korff M, Turck F.

Nat Commun. 2014 Aug 4;5:4558. doi: 10.1038/ncomms5558.


Platform for efficient switching between multiple devices in the intensive care unit.

De Backere F, Vanhove T, Dejonghe E, Feys M, Herinckx T, Vankelecom J, Decruyenaere J, De Turck F.

Methods Inf Med. 2015;54(1):5-15. doi: 10.3414/ME13-02-0021. Epub 2014 Jun 6.


miR824-Regulated AGAMOUS-LIKE16 Contributes to Flowering Time Repression in Arabidopsis.

Hu JY, Zhou Y, He F, Dong X, Liu LY, Coupland G, Turck F, de Meaux J.

Plant Cell. 2014 May;26(5):2024-2037. Epub 2014 May 29.


Validity analysis of a unique infection surveillance system in the intensive care unit by analysis of a data warehouse built through a workflow-integrated software application.

De Bus L, Diet G, Gadeyne B, Leroux-Roels I, Claeys G, Steurbaut K, Benoit D, De Turck F, Decruyenaere J, Depuydt P.

J Hosp Infect. 2014 Jul;87(3):159-64. doi: 10.1016/j.jhin.2014.03.010. Epub 2014 Apr 28.


Post-fertilization expression of FLOWERING LOCUS T suppresses reproductive reversion.

Liu L, Farrona S, Klemme S, Turck FK.

Front Plant Sci. 2014 Apr 30;5:164. doi: 10.3389/fpls.2014.00164. eCollection 2014.


Algorithms for recollection of search terms based on the Wikipedia category structure.

Vandamme S, De Turck F.

ScientificWorldJournal. 2014 Jan 29;2014:454868. doi: 10.1155/2014/454868. eCollection 2014.


Elevated levels of MYB30 in the phloem accelerate flowering in Arabidopsis through the regulation of FLOWERING LOCUS T.

Liu L, Zhang J, Adrian J, Gissot L, Coupland G, Yu D, Turck F.

PLoS One. 2014 Feb 25;9(2):e89799. doi: 10.1371/journal.pone.0089799. eCollection 2014.


Ontology-driven monitoring of patient's vital signs enabling personalized medical detection and alert.

Hristoskova A, Sakkalis V, Zacharioudakis G, Tsiknakis M, De Turck F.

Sensors (Basel). 2014 Jan 17;14(1):1598-628. doi: 10.3390/s140101598.


Probabilistic priority assessment of nurse calls.

Ongenae F, Myny D, Dhaene T, Defloor T, Van Goubergen D, Verhoeve P, Decruyenaere J, De Turck F.

Med Decis Making. 2014 May;34(4):485-502. doi: 10.1177/0272989X13517179. Epub 2014 Jan 7.


A self-learning nurse call system.

Ongenae F, Claeys M, Kerckhove W, Dupont T, Verhoeve P, De Turck F.

Comput Biol Med. 2014 Jan;44:110-23. doi: 10.1016/j.compbiomed.2013.10.014. Epub 2013 Nov 6.


Autonomic care platform for optimizing query performance.

Steurbaut K, Latré S, Decruyenaere J, De Turck F.

BMC Med Inform Decis Mak. 2013 Oct 27;13:120. doi: 10.1186/1472-6947-13-120.


Natural variation in epigenetic gene regulation and its effects on plant developmental traits.

Turck F, Coupland G.

Evolution. 2014 Mar;68(3):620-31. doi: 10.1111/evo.12286. Epub 2013 Oct 31. Review.


ATAF1 transcription factor directly regulates abscisic acid biosynthetic gene NCED3 in Arabidopsis thaliana.

Jensen MK, Lindemose S, de Masi F, Reimer JJ, Nielsen M, Perera V, Workman CT, Turck F, Grant MR, Mundy J, Petersen M, Skriver K.

FEBS Open Bio. 2013 Jul 29;3:321-7. doi: 10.1016/j.fob.2013.07.006. eCollection 2013.


VAL- and AtBMI1-mediated H2Aub initiate the switch from embryonic to postgerminative growth in Arabidopsis.

Yang C, Bratzel F, Hohmann N, Koch M, Turck F, Calonje M.

Curr Biol. 2013 Jul 22;23(14):1324-9. doi: 10.1016/j.cub.2013.05.050. Epub 2013 Jun 27.


Multiple loci and genetic interactions involving flowering time genes regulate stem branching among natural variants of Arabidopsis.

Huang X, Ding J, Effgen S, Turck F, Koornneef M.

New Phytol. 2013 Aug;199(3):843-57. doi: 10.1111/nph.12306. Epub 2013 May 14.


Mutation identification by direct comparison of whole-genome sequencing data from mutant and wild-type individuals using k-mers.

Nordström KJ, Albani MC, James GV, Gutjahr C, Hartwig B, Turck F, Paszkowski U, Coupland G, Schneeberger K.

Nat Biotechnol. 2013 Apr;31(4):325-30. doi: 10.1038/nbt.2515. Epub 2013 Mar 10.


NEOREG: design and implementation of an online Neonatal Registration System to access, follow and analyse the data of newborns with congenital cytomegalovirus infection.

Steurbaut K, De Backere F, Keymeulen A, De Leenheer M, Smets K, De Turck F.

Inform Health Soc Care. 2013 Sep;38(3):223-35. doi: 10.3109/17538157.2012.741166. Epub 2013 Jan 16.


Natural variation of H3K27me3 distribution between two Arabidopsis accessions and its association with flanking transposable elements.

Dong X, Reimer J, Göbel U, Engelhorn J, He F, Schoof H, Turck F.

Genome Biol. 2012 Dec 19;13(12):R117. doi: 10.1186/gb-2012-13-12-r117.


Fast isogenic mapping-by-sequencing of ethyl methanesulfonate-induced mutant bulks.

Hartwig B, James GV, Konrad K, Schneeberger K, Turck F.

Plant Physiol. 2012 Oct;160(2):591-600. doi: 10.1104/pp.112.200311. Epub 2012 Jul 26.


Towards automated generation and execution of clinical guidelines: engine design and implementation through the ICU Modified Schofield use case.

De Backere F, Moens H, Steurbaut K, Colpaert K, Decruyenaere J, De Turck F.

Comput Biol Med. 2012 Aug;42(8):793-805. doi: 10.1016/j.compbiomed.2012.06.003. Epub 2012 Jul 5.


Development-related PcG target in the apex 4 controls leaf margin architecture in Arabidopsis thaliana.

Engelhorn J, Reimer JJ, Leuz I, Göbel U, Huettel B, Farrona S, Turck F.

Development. 2012 Jul;139(14):2566-75. doi: 10.1242/dev.078618. Epub 2012 Jun 6.


Genome-wide analysis of cis-regulatory divergence between species in the Arabidopsis genus.

He F, Zhang X, Hu J, Turck F, Dong X, Goebel U, Borevitz J, de Meaux J.

Mol Biol Evol. 2012 Nov;29(11):3385-95. doi: 10.1093/molbev/mss146. Epub 2012 May 28.


COSARA: integrated service platform for infection surveillance and antibiotic management in the ICU.

Steurbaut K, Colpaert K, Gadeyne B, Depuydt P, Vosters P, Danneels C, Benoit D, Decruyenaere J, De Turck F.

J Med Syst. 2012 Dec;36(6):3765-75. doi: 10.1007/s10916-012-9849-8. Epub 2012 Apr 18.


Widespread interspecific divergence in cis-regulation of transposable elements in the Arabidopsis genus.

He F, Zhang X, Hu JY, Turck F, Dong X, Goebel U, Borevitz JO, de Meaux J.

Mol Biol Evol. 2012 Mar;29(3):1081-91. doi: 10.1093/molbev/msr281. Epub 2011 Nov 15.


Impact of real-time electronic alerting of acute kidney injury on therapeutic intervention and progression of RIFLE class.

Colpaert K, Hoste EA, Steurbaut K, Benoit D, Van Hoecke S, De Turck F, Decruyenaere J.

Crit Care Med. 2012 Apr;40(4):1164-70. doi: 10.1097/CCM.0b013e3182387a6b.


Tissue-specific expression of FLOWERING LOCUS T in Arabidopsis is maintained independently of polycomb group protein repression.

Farrona S, Thorpe FL, Engelhorn J, Adrian J, Dong X, Sarid-Krebs L, Goodrich J, Turck F.

Plant Cell. 2011 Sep;23(9):3204-14. doi: 10.1105/tpc.111.087809. Epub 2011 Sep 13.


Speeding cis-trans regulation discovery by phylogenomic analyses coupled with screenings of an arrayed library of Arabidopsis transcription factors.

Castrillo G, Turck F, Leveugle M, Lecharny A, Carbonero P, Coupland G, Paz-Ares J, Oñate-Sánchez L.

PLoS One. 2011;6(6):e21524. doi: 10.1371/journal.pone.0021524. Epub 2011 Jun 27.


Brahma is required for proper expression of the floral repressor FLC in Arabidopsis.

Farrona S, Hurtado L, March-Díaz R, Schmitz RJ, Florencio FJ, Turck F, Amasino RM, Reyes JC.

PLoS One. 2011 Mar 21;6(3):e17997. doi: 10.1371/journal.pone.0017997.


An ontology-based nurse call management system (oNCS) with probabilistic priority assessment.

Ongenae F, Myny D, Dhaene T, Defloor T, Van Goubergen D, Verhoeve P, Decruyenaere J, De Turck F.

BMC Health Serv Res. 2011 Feb 4;11:26. doi: 10.1186/1472-6963-11-26.

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