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Items: 38

1.

Sphingolipidomics analysis of large clinical cohorts. Part 1: Technical notes and practical considerations.

Chew WS, Seow WL, Chong JR, Lai MKP, Torta F, Wenk MR, Herr DR.

Biochem Biophys Res Commun. 2018 Apr 18. pii: S0006-291X(18)30845-3. doi: 10.1016/j.bbrc.2018.04.076. [Epub ahead of print]

PMID:
29654754
2.

Sphingolipid Analysis in Clinical Research.

Burla B, Muralidharan S, Wenk MR, Torta F.

Methods Mol Biol. 2018;1730:135-162. doi: 10.1007/978-1-4939-7592-1_11.

PMID:
29363072
3.

Bioinspired Cell-Derived Nanovesicles versus Exosomes as Drug Delivery Systems: a Cost-Effective Alternative.

Goh WJ, Zou S, Ong WY, Torta F, Alexandra AF, Schiffelers RM, Storm G, Wang JW, Czarny B, Pastorin G.

Sci Rep. 2017 Oct 30;7(1):14322. doi: 10.1038/s41598-017-14725-x.

4.

Deciphering lipid structures based on platform-independent decision rules.

Hartler J, Triebl A, Ziegl A, Trötzmüller M, Rechberger GN, Zeleznik OA, Zierler KA, Torta F, Cazenave-Gassiot A, Wenk MR, Fauland A, Wheelock CE, Armando AM, Quehenberger O, Zhang Q, Wakelam MJO, Haemmerle G, Spener F, Köfeler HC, Thallinger GG.

Nat Methods. 2017 Dec;14(12):1171-1174. doi: 10.1038/nmeth.4470. Epub 2017 Oct 23.

PMID:
29058722
5.

Mfsd2b is essential for the sphingosine-1-phosphate export in erythrocytes and platelets.

Vu TM, Ishizu AN, Foo JC, Toh XR, Zhang F, Whee DM, Torta F, Cazenave-Gassiot A, Matsumura T, Kim S, Toh SES, Suda T, Silver DL, Wenk MR, Nguyen LN.

Nature. 2017 Oct 26;550(7677):524-528. doi: 10.1038/nature24053. Epub 2017 Oct 18.

PMID:
29045386
6.

Enriched Expression of Neutral Sphingomyelinase 2 in the Striatum is Essential for Regulation of Lipid Raft Content and Motor Coordination.

Tan LH, Tan AJ, Ng YY, Chua JJ, Chew WS, Muralidharan S, Torta F, Dutta B, Sze SK, Herr DR, Ong WY.

Mol Neurobiol. 2017 Oct 17. doi: 10.1007/s12035-017-0784-z. [Epub ahead of print]

PMID:
29043558
7.

Harmonizing lipidomics: NIST interlaboratory comparison exercise for lipidomics using SRM 1950-Metabolites in Frozen Human Plasma.

Bowden JA, Heckert A, Ulmer CZ, Jones CM, Koelmel JP, Abdullah L, Ahonen L, Alnouti Y, Armando AM, Asara JM, Bamba T, Barr JR, Bergquist J, Borchers CH, Brandsma J, Breitkopf SB, Cajka T, Cazenave-Gassiot A, Checa A, Cinel MA, Colas RA, Cremers S, Dennis EA, Evans JE, Fauland A, Fiehn O, Gardner MS, Garrett TJ, Gotlinger KH, Han J, Huang Y, Neo AH, Hyötyläinen T, Izumi Y, Jiang H, Jiang H, Jiang J, Kachman M, Kiyonami R, Klavins K, Klose C, Köfeler HC, Kolmert J, Koal T, Koster G, Kuklenyik Z, Kurland IJ, Leadley M, Lin K, Maddipati KR, McDougall D, Meikle PJ, Mellett NA, Monnin C, Moseley MA, Nandakumar R, Oresic M, Patterson R, Peake D, Pierce JS, Post M, Postle AD, Pugh R, Qiu Y, Quehenberger O, Ramrup P, Rees J, Rembiesa B, Reynaud D, Roth MR, Sales S, Schuhmann K, Schwartzman ML, Serhan CN, Shevchenko A, Somerville SE, St John-Williams L, Surma MA, Takeda H, Thakare R, Thompson JW, Torta F, Triebl A, Trötzmüller M, Ubhayasekera SJK, Vuckovic D, Weir JM, Welti R, Wenk MR, Wheelock CE, Yao L, Yuan M, Zhao XH, Zhou S.

J Lipid Res. 2017 Dec;58(12):2275-2288. doi: 10.1194/jlr.M079012. Epub 2017 Oct 6.

PMID:
28986437
8.

ABCA8 Regulates Cholesterol Efflux and High-Density Lipoprotein Cholesterol Levels.

Trigueros-Motos L, van Capelleveen JC, Torta F, Castaño D, Zhang LH, Chai EC, Kang M, Dimova LG, Schimmel AWM, Tietjen I, Radomski C, Tan LJ, Thiam CH, Narayanaswamy P, Wu DH, Dorninger F, Yakala GK, Barhdadi A, Angeli V, Dubé MP, Berger J, Dallinga-Thie GM, Tietge UJF, Wenk MR, Hayden MR, Hovingh GK, Singaraja RR.

Arterioscler Thromb Vasc Biol. 2017 Nov;37(11):2147-2155. doi: 10.1161/ATVBAHA.117.309574. Epub 2017 Sep 7.

PMID:
28882873
9.

Lipid transport by TMEM24 at ER-plasma membrane contacts regulates pulsatile insulin secretion.

Lees JA, Messa M, Sun EW, Wheeler H, Torta F, Wenk MR, De Camilli P, Reinisch KM.

Science. 2017 Feb 17;355(6326). pii: eaah6171. doi: 10.1126/science.aah6171.

10.

Characterization of a dynamic metabolon producing the defense compound dhurrin in sorghum.

Laursen T, Borch J, Knudsen C, Bavishi K, Torta F, Martens HJ, Silvestro D, Hatzakis NS, Wenk MR, Dafforn TR, Olsen CE, Motawia MS, Hamberger B, Møller BL, Bassard JE.

Science. 2016 Nov 18;354(6314):890-893.

PMID:
27856908
11.

Role of prefrontal cortical calcium-independent phospholipase A2 in antinociceptive effect of the norepinephrine reuptake inhibitor antidepresssant maprotiline.

Chew WS, Shalini SM, Torta F, Wenk MR, Stohler C, Yeo JF, Herr DR, Ong WY.

Neuroscience. 2017 Jan 6;340:91-100. doi: 10.1016/j.neuroscience.2016.10.037. Epub 2016 Oct 24.

PMID:
27789386
12.

Defining key roles for auxiliary proteins in an ABC transporter that maintains bacterial outer membrane lipid asymmetry.

Thong S, Ercan B, Torta F, Fong ZY, Wong HY, Wenk MR, Chng SS.

Elife. 2016 Aug 16;5. pii: e19042. doi: 10.7554/eLife.19042.

13.

Biological Effects of Naturally Occurring Sphingolipids, Uncommon Variants, and Their Analogs.

Lai MK, Chew WS, Torta F, Rao A, Harris GL, Chun J, Herr DR.

Neuromolecular Med. 2016 Sep;18(3):396-414. doi: 10.1007/s12017-016-8424-8. Epub 2016 Jul 8. Review.

PMID:
27393119
14.

Aberrant expression of the S1P regulating enzymes, SPHK1 and SGPL1, contributes to a migratory phenotype in OSCC mediated through S1PR2.

Patmanathan SN, Johnson SP, Lai SL, Panja Bernam S, Lopes V, Wei W, Ibrahim MH, Torta F, Narayanaswamy P, Wenk MR, Herr DR, Murray PG, Yap LF, Paterson IC.

Sci Rep. 2016 May 10;6:25650. doi: 10.1038/srep25650.

15.

Sphingosine kinase inhibition ameliorates chronic hypoperfusion-induced white matter lesions.

Yang Y, Torta F, Arai K, Wenk MR, Herr DR, Wong PT, Lai MK.

Neurochem Int. 2016 Mar;94:90-7. doi: 10.1016/j.neuint.2016.02.012. Epub 2016 Feb 24.

PMID:
26921668
16.

Ceramides And Stress Signalling Intersect With Autophagic Defects In Neurodegenerative Drosophila blue cheese (bchs) Mutants.

Hebbar S, Sahoo I, Matysik A, Argudo Garcia I, Osborne KA, Papan C, Torta F, Narayanaswamy P, Fun XH, Wenk MR, Shevchenko A, Schwudke D, Kraut R.

Sci Rep. 2015 Dec 7;5:15926. doi: 10.1038/srep15926.

17.

Arabidopsis AtPLC2 Is a Primary Phosphoinositide-Specific Phospholipase C in Phosphoinositide Metabolism and the Endoplasmic Reticulum Stress Response.

Kanehara K, Yu CY, Cho Y, Cheong WF, Torta F, Shui G, Wenk MR, Nakamura Y.

PLoS Genet. 2015 Sep 24;11(9):e1005511. doi: 10.1371/journal.pgen.1005511. eCollection 2015 Sep.

18.

INTRACELLULAR TRANSPORT. PI4P/phosphatidylserine countertransport at ORP5- and ORP8-mediated ER-plasma membrane contacts.

Chung J, Torta F, Masai K, Lucast L, Czapla H, Tanner LB, Narayanaswamy P, Wenk MR, Nakatsu F, De Camilli P.

Science. 2015 Jul 24;349(6246):428-32. doi: 10.1126/science.aab1370.

19.

Rhinovirus uses a phosphatidylinositol 4-phosphate/cholesterol counter-current for the formation of replication compartments at the ER-Golgi interface.

Roulin PS, Lötzerich M, Torta F, Tanner LB, van Kuppeveld FJ, Wenk MR, Greber UF.

Cell Host Microbe. 2014 Nov 12;16(5):677-90. doi: 10.1016/j.chom.2014.10.003. Epub 2014 Nov 12.

20.

Lidocaine treatment in refractory status epilepticus resulting from febrile infection-related epilepsy syndrome: a case report and follow-up.

Capizzi G, Vittorini R, Torta F, Davico C, Rainò E, Conio A, Longobardo A, Briatore E, Podestà B, Calzolari S.

Neuropediatrics. 2015 Feb;46(1):65-8. doi: 10.1055/s-0034-1389898. Epub 2014 Oct 24. Review.

21.

Structure of a lipid-bound extended synaptotagmin indicates a role in lipid transfer.

Schauder CM, Wu X, Saheki Y, Narayanaswamy P, Torta F, Wenk MR, De Camilli P, Reinisch KM.

Nature. 2014 Jun 26;510(7506):552-5.

22.

Lipidomic "deep profiling": an enhanced workflow to reveal new molecular species of signaling lipids.

Narayanaswamy P, Shinde S, Sulc R, Kraut R, Staples G, Thiam CH, Grimm R, Sellergren B, Torta F, Wenk MR.

Anal Chem. 2014 Mar 18;86(6):3043-7. doi: 10.1021/ac4039652. Epub 2014 Feb 27.

PMID:
24533588
23.

Quantitative analysis of S-nitrosylated proteins.

Torta F, Bachi A.

Methods Mol Biol. 2012;893:405-16. doi: 10.1007/978-1-61779-885-6_25.

PMID:
22665314
24.

SNX3-dependent regulation of epidermal growth factor receptor (EGFR) trafficking and degradation by aspirin in epidermoid carcinoma (A-431) cells.

Chiow KH, Tan Y, Chua RY, Huang D, Ng ML, Torta F, Wenk MR, Wong SH.

Cell Mol Life Sci. 2012 May;69(9):1505-21. doi: 10.1007/s00018-011-0887-z. Epub 2011 Dec 11.

PMID:
22159558
25.

Nanostructured TiO₂ thin films for phosphoproteomics studies with MALDI mass spectrometry.

Torta F, Fusi M, Casari CS, Bassi AL, Bachi A.

Methods Mol Biol. 2011;790:173-81. doi: 10.1007/978-1-61779-319-6_13.

PMID:
21948414
26.

Direct and indirect detection methods for the analysis of S-nitrosylated peptides and proteins.

Torta F, Elviri L, Bachi A.

Methods Enzymol. 2010;473:265-80. doi: 10.1016/S0076-6879(10)73014-7. Review.

PMID:
20513483
27.

Titanium dioxide coated MALDI plate for on target analysis of phosphopeptides.

Torta F, Fusi M, Casari CS, Bottani CE, Bachi A.

J Proteome Res. 2009 Apr;8(4):1932-42. doi: 10.1021/pr8008836.

PMID:
19714878
28.

A global benchmark study using affinity-based biosensors.

Rich RL, Papalia GA, Flynn PJ, Furneisen J, Quinn J, Klein JS, Katsamba PS, Waddell MB, Scott M, Thompson J, Berlier J, Corry S, Baltzinger M, Zeder-Lutz G, Schoenemann A, Clabbers A, Wieckowski S, Murphy MM, Page P, Ryan TE, Duffner J, Ganguly T, Corbin J, Gautam S, Anderluh G, Bavdek A, Reichmann D, Yadav SP, Hommema E, Pol E, Drake A, Klakamp S, Chapman T, Kernaghan D, Miller K, Schuman J, Lindquist K, Herlihy K, Murphy MB, Bohnsack R, Andrien B, Brandani P, Terwey D, Millican R, Darling RJ, Wang L, Carter Q, Dotzlaf J, Lopez-Sagaseta J, Campbell I, Torreri P, Hoos S, England P, Liu Y, Abdiche Y, Malashock D, Pinkerton A, Wong M, Lafer E, Hinck C, Thompson K, Primo CD, Joyce A, Brooks J, Torta F, Bagge Hagel AB, Krarup J, Pass J, Ferreira M, Shikov S, Mikolajczyk M, Abe Y, Barbato G, Giannetti AM, Krishnamoorthy G, Beusink B, Satpaev D, Tsang T, Fang E, Partridge J, Brohawn S, Horn J, Pritsch O, Obal G, Nilapwar S, Busby B, Gutierrez-Sanchez G, Gupta RD, Canepa S, Witte K, Nikolovska-Coleska Z, Cho YH, D'Agata R, Schlick K, Calvert R, Munoz EM, Hernaiz MJ, Bravman T, Dines M, Yang MH, Puskas A, Boni E, Li J, Wear M, Grinberg A, Baardsnes J, Dolezal O, Gainey M, Anderson H, Peng J, Lewis M, Spies P, Trinh Q, Bibikov S, Raymond J, Yousef M, Chandrasekaran V, Feng Y, Emerick A, Mundodo S, Guimaraes R, McGirr K, Li YJ, Hughes H, Mantz H, Skrabana R, Witmer M, Ballard J, Martin L, Skladal P, Korza G, Laird-Offringa I, Lee CS, Khadir A, Podlaski F, Neuner P, Rothacker J, Rafique A, Dankbar N, Kainz P, Gedig E, Vuyisich M, Boozer C, Ly N, Toews M, Uren A, Kalyuzhniy O, Lewis K, Chomey E, Pak BJ, Myszka DG.

Anal Biochem. 2009 Mar 15;386(2):194-216. doi: 10.1016/j.ab.2008.11.021. Epub 2008 Nov 27.

29.

Proteomic analysis of protein S-nitrosylation.

Torta F, Usuelli V, Malgaroli A, Bachi A.

Proteomics. 2008 Nov;8(21):4484-94. doi: 10.1002/pmic.200800089. Review.

PMID:
18846506
30.

Nanodiscs for immobilization of lipid bilayers and membrane receptors: kinetic analysis of cholera toxin binding to a glycolipid receptor.

Borch J, Torta F, Sligar SG, Roepstorff P.

Anal Chem. 2008 Aug 15;80(16):6245-52. doi: 10.1021/ac8000644. Epub 2008 Jul 11.

PMID:
18616345
31.

Mass spectrometry and hydrogen/deuterium exchange measurements of alcohol-induced structural changes in cellular retinol-binding protein type I.

Torta F, Elviri L, Careri M, Mangia A, Cavazzini D, Rossi GL.

Rapid Commun Mass Spectrom. 2008;22(3):330-6. doi: 10.1002/rcm.3372.

PMID:
18181245
32.
33.

Solvent-induced ligand dissociation and conformational states of Cellular Retinol-Binding Protein type I.

Torta F, Dyuysekina AE, Cavazzini D, Fantuzzi A, Bychkova VE, Rossi GL.

Biochim Biophys Acta. 2004 Dec 1;1703(1):21-9.

PMID:
15588699
34.

Rapid fluorimetric method to detect total plasma malondialdehyde with mild derivatization conditions.

Del Rio D, Pellegrini N, Colombi B, Bianchi M, Serafini M, Torta F, Tegoni M, Musci M, Brighenti F.

Clin Chem. 2003 Apr;49(4):690-2. No abstract available.

35.

[Postoperative pulmonary thromboembolism].

Kiss A, Vitale L, Drago GW, Torta F, Del Sedime L.

Minerva Chir. 1994 Mar;49(3):177-81. Italian.

PMID:
8028727
36.

[RVG in dental practice].

Imburgia G, Leone A, Maneschi M, Torta F.

Attual Dent. 1990 Feb 25;6(7):40-5. Italian. No abstract available.

PMID:
2393537
37.

[Diagnostic and prognostic use of myocardial scintiscanning with 99m-technetium pyrophosphate].

Mathis I, Rosso U, Torta F, Scassa R.

Minerva Cardioangiol. 1980 Sep;28(9):585-98. Review. Italian. No abstract available.

PMID:
7007919
38.

[Freguency of thalassemic trait and GPD deficiency in the school population of the small towns in the environs of Turin].

Scappaticci E, Miniero R, Torta F, David O, Massaro AL, Saglio G, Palestro M, Nicola P.

Minerva Pediatr. 1975 Mar 3;27(7):419-25. Italian. No abstract available.

PMID:
1143224

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