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Items: 1 to 50 of 79

1.

Interactions of 2'-O-methyl oligoribonucleotides with the RNA models of the 30S subunit A-site.

Jasiński M, Kulik M, Wojciechowska M, Stolarski R, Trylska J.

PLoS One. 2018 Jan 19;13(1):e0191138. doi: 10.1371/journal.pone.0191138. eCollection 2018.

2.

Isolating the roles of different forcing agents in global stratospheric temperature changes using model integrations with incrementally added single forcings.

Aquila V, Swartz WH, Waugh DW, Colarco PR, Pawson S, Polvani LM, Stolarski RS.

J Geophys Res Atmos. 2016 Jul 16;121(13):8067-8082. doi: 10.1002/2015JD023841. Epub 2016 Apr 1.

3.

Acetylpyrene-labelled 7-methylguanine nucleotides: unusual fluorescence properties and application to decapping scavenger activity monitoring.

Kasprzyk R, Kowalska J, Wieczorek Z, Szabelski M, Stolarski R, Jemielity J.

Org Biomol Chem. 2016 Apr 28;14(16):3863-8. doi: 10.1039/c6ob00419a. Epub 2016 Mar 15.

PMID:
26975842
4.
5.

[Map of Polish Biochemistry].

Stolarski R.

Postepy Biochem. 2015;61(3):239-40. Polish. No abstract available.

6.

Eukaryotic translation initiation is controlled by cooperativity effects within ternary complexes of 4E-BP1, eIF4E, and the mRNA 5' cap.

Modrak-Wojcik A, Gorka M, Niedzwiecka K, Zdanowski K, Zuberek J, Niedzwiecka A, Stolarski R.

FEBS Lett. 2013 Dec 11;587(24):3928-34. doi: 10.1016/j.febslet.2013.10.043. Epub 2013 Nov 6.

7.

A positive Tinel sign as predictor of pain relief or sensory recovery after decompression of chronic tibial nerve compression in patients with diabetic neuropathy.

Dellon AL, Muse VL, Scott ND, Akre T, Anderson SR, Barret SL, Biddinger KR, Bregman PJ, Bullard BP, Dauphinee DM, DeJesus JM, DeJesus RA, Ducic I, Dunkerly J, Galina MR, Hung V, Ichtertz DR, Kutka MF, Jacoby RP, Johnson JB, Mader DW, Maloney CT Jr, Mancuso PJ, Martin RC, Martin RF, McDowel BA, Rizzo VJ, Rose M, Rosson GD, Shafiroff BB, Steck JK, Stolarski RG, Swier P, Wellens-Bruschayt TA, Wilke B, Williams EH, Wood MA, Wood WA, Younes MP, Yuksel F.

J Reconstr Microsurg. 2012 May;28(4):235-40. doi: 10.1055/s-0032-1306371. Epub 2012 Mar 12.

PMID:
22411625
8.

Prevention of ulceration, amputation, and reduction of hospitalization: outcomes of a prospective multicenter trial of tibial neurolysis in patients with diabetic neuropathy.

Dellon AL, Muse VL, Nickerson DS, Akre T, Anderson SR, Barrett SL, Biddinger KR, Bregman PJ, Bullard BP, Dauphinee DM, DeJesus JM, DeJesus RA, Ducic I, Dunkerly J, Galina MR, Hung V, Ichtertz DR, Kutka MF, Jacoby RP, Johnson JB, Mader DW, Maloney CT Jr, Mancuso PJ, Martin RC, Martin RF, McDowel BA, Rizzo VJ, Rose M, Rosson GD, Shafiroff BB, Steck JK, Stolarski RG, Swier P, Wellens-Bruschayt TA, Wilke B, Williams EH, Wood MA, Wood WA, Younes MP, Yuksel F.

J Reconstr Microsurg. 2012 May;28(4):241-6. doi: 10.1055/s-0032-1306372. Epub 2012 Mar 12.

PMID:
22411624
9.

Structural basis for nematode eIF4E binding an m(2,2,7)G-Cap and its implications for translation initiation.

Liu W, Jankowska-Anyszka M, Piecyk K, Dickson L, Wallace A, Niedzwiecka A, Stepinski J, Stolarski R, Darzynkiewicz E, Kieft J, Zhao R, Jones DN, Davis RE.

Nucleic Acids Res. 2011 Nov 1;39(20):8820-32. doi: 10.1093/nar/gkr650. Epub 2011 Sep 29.

10.

Thermodynamics of molecular recognition of mRNA 5' cap by yeast eukaryotic initiation factor 4E.

Kiraga-Motoszko K, Niedzwiecka A, Modrak-Wojcik A, Stepinski J, Darzynkiewicz E, Stolarski R.

J Phys Chem B. 2011 Jul 14;115(27):8746-54. doi: 10.1021/jp2012039. Epub 2011 Jun 22.

PMID:
21650456
11.

Dynamical insight into Caenorhabditis elegans eIF4E recognition specificity for mono-and trimethylated structures of mRNA 5' cap.

Ruszczyńska-Bartnik K, Maciejczyk M, Stolarski R.

J Mol Model. 2011 Apr;17(4):727-37. doi: 10.1007/s00894-010-0773-x. Epub 2010 Jun 10.

12.

Diverse role of three tyrosines in binding of the RNA 5' cap to the human nuclear cap binding complex.

Worch R, Jankowska-Anyszka M, Niedzwiecka A, Stepinski J, Mazza C, Darzynkiewicz E, Cusack S, Stolarski R.

J Mol Biol. 2009 Jan 16;385(2):618-27. doi: 10.1016/j.jmb.2008.10.092. Epub 2008 Nov 8.

PMID:
19026660
13.

Structural changes of eIF4E upon binding to the mRNA 5' monomethylguanosine and trimethylguanosine Cap.

Rutkowska-Wlodarczyk I, Stepinski J, Dadlez M, Darzynkiewicz E, Stolarski R, Niedzwiecka A.

Biochemistry. 2008 Mar 4;47(9):2710-20. doi: 10.1021/bi701168z. Epub 2008 Jan 26.

PMID:
18220364
14.

Stacking efficiency and flexibility analysis of aromatic amino acids in cap-binding proteins.

Worch R, Stolarski R.

Proteins. 2008 Jun;71(4):2026-37. doi: 10.1002/prot.21882.

PMID:
18186485
15.

Synthesis of Leishmania cap-4 intermediates, cap-2 and cap-3.

Lewdorowicz M, Stepinski J, Kierzek R, Jemielity J, Zuberek J, Yoffe Y, Shapira M, Stolarski R, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2007;26(10-12):1339-48.

PMID:
18066780
16.

Synthesis of 3H and 13C labeled mRNA cap dinucleotides--useful tools for NMR, biochemical, and biological studies.

Jemielity J, Stolarski R, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2007;26(10-12):1315-9.

PMID:
18066775
17.

Assignment of the absolute configuration of P-chiral 5' mRNA cap analogues containing phosphorothioate moiety.

Kowalska J, Lewdorowicz M, Zuberek J, Bojarska E, Stepinski J, Stolarski R, Darzynkiewicz E, Jemielity J.

Nucleosides Nucleotides Nucleic Acids. 2007;26(10-12):1301-5.

PMID:
18066772
18.

Synthesis of anti-reverse cap analogs (ARCAs) and their applications in mRNA translation and stability.

Grudzien-Nogalska E, Stepinski J, Jemielity J, Zuberek J, Stolarski R, Rhoads RE, Darzynkiewicz E.

Methods Enzymol. 2007;431:203-27. Review.

PMID:
17923237
19.

Biophysical approach to studies of cap-eIF4E interaction by synthetic cap analogs.

Niedzwiecka A, Stepinski J, Antosiewicz JM, Darzynkiewicz E, Stolarski R.

Methods Enzymol. 2007;430:209-45.

PMID:
17913640
20.

Tautomerism, acid-base properties and conformation of methylated analogues of the promutagenic N4-hydroxycytosine.

Niedźwiecka-Kornaś A, Kierdaszuk B, Stolarski R, Shugar D.

Biophys Chem. 1998 Apr 20;71(2-3):87-98.

PMID:
17029694
21.

Enzymatically stable 5' mRNA cap analogs: synthesis and binding studies with human DcpS decapping enzyme.

Kalek M, Jemielity J, Darzynkiewicz ZM, Bojarska E, Stepinski J, Stolarski R, Davis RE, Darzynkiewicz E.

Bioorg Med Chem. 2006 May 1;14(9):3223-30. Epub 2006 Jan 23.

PMID:
16431118
22.

Novel way of capping mRNA trimer and studies of its interaction with human nuclear cap-binding complex.

Worch R, Stepinski J, Niedzwiecka A, Jankowska-Anyszka M, Mazza C, Cusack S, Stolarski R, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2005;24(5-7):1131-4.

PMID:
16248107
23.

Novel dinucleoside 5',5'-triphosphate cap analogues. Synthesis and affinity for murine translation factor eIF4E.

Stepinski J, Zuberek J, Jemielity J, Kalek M, Stolarski R, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2005;24(5-7):629-33.

PMID:
16248001
24.

Synthesis and biochemical properties of novel mRNA 5' cap analogs resistant to enzymatic hydrolysis.

Kalek M, Jemielity J, Grudzien E, Zuberek J, Bojarska E, Cohen LS, Stepinski J, Stolarski R, Davis RE, Rhoads RE, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2005;24(5-7):615-21.

PMID:
16247999
25.

Synthesis and properties of mRNA cap analogs containing phosphorothioate moiety in 5',5'-triphosphate chain.

Kowalska J, Lewdorowicz M, Zuberek J, Bojarska E, Wojcik J, Cohen LS, Davis RE, Stepinski J, Stolarski R, Darzynkiewicz E, Jemielity J.

Nucleosides Nucleotides Nucleic Acids. 2005;24(5-7):595-600.

PMID:
16247995
26.

Synthesis and enzymatic characterization of methylene analogs of adenosine 5'-tetraphosphate (P4A).

Jemielity J, Pietrowska-Borek M, Starzynska E, Kowalska J, Stolarski R, Guranowski A, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2005;24(5-7):589-93.

PMID:
16247994
27.

Deaggregation of eIF4E induced by mRNA 5' cap binding.

Niedzwiecka A, Darzynkiewicz E, Stolarski R.

Nucleosides Nucleotides Nucleic Acids. 2005;24(5-7):507-11.

PMID:
16247980
28.

The antiviral drug ribavirin does not mimic the 7-methylguanosine moiety of the mRNA cap structure in vitro.

Westman B, Beeren L, Grudzien E, Stepinski J, Worch R, Zuberek J, Jemielity J, Stolarski R, Darzynkiewicz E, Rhoads RE, Preiss T.

RNA. 2005 Oct;11(10):1505-13. Epub 2005 Aug 30.

29.

Specificity of recognition of mRNA 5' cap by human nuclear cap-binding complex.

Worch R, Niedzwiecka A, Stepinski J, Mazza C, Jankowska-Anyszka M, Darzynkiewicz E, Cusack S, Stolarski R.

RNA. 2005 Sep;11(9):1355-63. Epub 2005 Jul 25.

30.

Thermodynamics of mRNA 5' cap binding by eukaryotic translation initiation factor eIF4E.

Niedzwiecka A, Darzynkiewicz E, Stolarski R.

Biochemistry. 2004 Oct 26;43(42):13305-17.

PMID:
15491137
31.

Novel cap analogs for in vitro synthesis of mRNAs with high translational efficiency.

Grudzien E, Stepinski J, Jankowska-Anyszka M, Stolarski R, Darzynkiewicz E, Rhoads RE.

RNA. 2004 Sep;10(9):1479-87.

32.

Chemical synthesis and binding activity of the trypanosomatid cap-4 structure.

Lewdorowicz M, Yoffe Y, Zuberek J, Jemielity J, Stepinski J, Kierzek R, Stolarski R, Shapira M, Darzynkiewicz E.

RNA. 2004 Sep;10(9):1469-78. Epub 2004 Jul 23.

33.

Influence of electric charge variation at residues 209 and 159 on the interaction of eIF4E with the mRNA 5' terminus.

Zuberek J, Jemielity J, Jablonowska A, Stepinski J, Dadlez M, Stolarski R, Darzynkiewicz E.

Biochemistry. 2004 May 11;43(18):5370-9.

PMID:
15122903
34.

Interaction between yeast eukaryotic initiation factor eIF4E and mRNA 5' cap analogues differs from that for murine eIF4E.

Kiraga-Motoszko K, Stepinski J, Niedzwiecka A, Jemielity J, Wszelaka-Rylik M, Stolarski R, Zielenkiewicz W, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1711-4.

PMID:
14565502
35.

Influence of the length of the phosphate chain in mRNA 5' cap analogues on their interaction with eukaryotic initiation factor 4E.

Zuberek J, Jemielity J, Niedzwiecka A, Stepinski J, Wyslouch-Cieszynska A, Stolarski R, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1707-10.

PMID:
14565501
36.

Binding studies of eukaryotic initiation factor eIF4E with novel mRNA dinucleotide cap analogues.

Zuberek J, Jemielity J, Stepinski J, Lewdorowicz M, Niedzwiecka A, Haber D, Stolarski R, Rhoads RE, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1703-6.

PMID:
14565500
37.

Thermodynamics of 7-methylguanosine cation stacking with tryptophan upon mRNA 5' cap binding to translation factor eIF4E.

Niedzwiecka A, Stepinski J, Balaspiri L, Darzynkiewicz E, Stolarski R.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1557-61.

PMID:
14565465
38.

Partial molar volumes of mRNA 5' cap analogues.

Szymanski J, Stepinski J, Poznanski J, Darzynkiewicz E, Zielenkiewicz W, Stolarski R.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1553-6.

PMID:
14565464
39.

Synthesis of novel mRNA 5' cap-analogues: dinucleoside P1, P3-tri-, P1, P4-tetra-, and P1, P5-pentaphosphates.

Jemielity J, Stepinski J, Jaremko M, Haber D, Stolarski R, Rhoads RE, Darzynkiewicz E.

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):691-4.

PMID:
14565255
40.

Charge distribution in 7-methylguanine regarding cation-pi interaction with protein factor eIF4E.

Ruszczynska K, Kamienska-Trela K, Wojcik J, Stepinski J, Darzynkiewicz E, Stolarski R.

Biophys J. 2003 Sep;85(3):1450-6.

41.

Novel "anti-reverse" cap analogs with superior translational properties.

Jemielity J, Fowler T, Zuberek J, Stepinski J, Lewdorowicz M, Niedzwiecka A, Stolarski R, Darzynkiewicz E, Rhoads RE.

RNA. 2003 Sep;9(9):1108-22.

42.

Thermodynamics of specific protein-RNA interactions.

Stolarski R.

Acta Biochim Pol. 2003;50(2):297-318. Review.

43.

Phosphorylation of eIF4E attenuates its interaction with mRNA 5' cap analogs by electrostatic repulsion: intein-mediated protein ligation strategy to obtain phosphorylated protein.

Zuberek J, Wyslouch-Cieszynska A, Niedzwiecka A, Dadlez M, Stepinski J, Augustyniak W, Gingras AC, Zhang Z, Burley SK, Sonenberg N, Stolarski R, Darzynkiewicz E.

RNA. 2003 Jan;9(1):52-61.

44.

Interaction of three Caenorhabditis elegans isoforms of translation initiation factor eIF4E with mono- and trimethylated mRNA 5' cap analogues.

Stachelska A, Wieczorek Z, Ruszczyńska K, Stolarski R, Pietrzak M, Lamphear BJ, Rhoads RE, Darzynkiewicz E, Jankowska-Anyszka M.

Acta Biochim Pol. 2002;49(3):671-82.

45.

Positive heat capacity change upon specific binding of translation initiation factor eIF4E to mRNA 5' cap.

Niedzwiecka A, Stepinski J, Darzynkiewicz E, Sonenberg N, Stolarski R.

Biochemistry. 2002 Oct 8;41(40):12140-8.

PMID:
12356315
46.

Biophysical studies of eIF4E cap-binding protein: recognition of mRNA 5' cap structure and synthetic fragments of eIF4G and 4E-BP1 proteins.

Niedzwiecka A, Marcotrigiano J, Stepinski J, Jankowska-Anyszka M, Wyslouch-Cieszynska A, Dadlez M, Gingras AC, Mak P, Darzynkiewicz E, Sonenberg N, Burley SK, Stolarski R.

J Mol Biol. 2002 Jun 7;319(3):615-35.

PMID:
12054859
47.
48.

Stopped-flow and Brownian dynamics studies of electrostatic effects in the kinetics of binding of 7-methyl-GpppG to the protein eIF4E.

Błachut-Okrasińska E, Bojarska E, Niedźwiecka A, Chlebicka L, Darzynkiewicz E, Stolarski R, St piński J, Antosiewicz JM.

Eur Biophys J. 2000;29(7):487-98.

PMID:
11156290
49.

Trends in the vertical distribution of ozone

Randel WJ, Stolarski RS, Cunnold DM, Logan JA, Newchurch MJ, Zawodny JM.

Science. 1999 Sep 10;285(5434):1689-92.

PMID:
10480999
50.

Quantitative assessment of mRNA cap analogues as inhibitors of in vitro translation.

Cai A, Jankowska-Anyszka M, Centers A, Chlebicka L, Stepinski J, Stolarski R, Darzynkiewicz E, Rhoads RE.

Biochemistry. 1999 Jun 29;38(26):8538-47.

PMID:
10387101

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