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Items: 1 to 50 of 95

1.

MaxSynBio - Avenues towards creating cells from the bottom up.

Schwille P, Spatz J, Landfester K, Bodenschatz E, Herminghaus S, Sourjik V, Erb T, Bastiaens P, Lipowsky R, Hyman A, Dabrock P, Baret JC, Vidakovic-Koch T, Bieling P, Dimova R, Mutschler H, Robinson T, Tang D, Wegner S, Sundmacher K.

Angew Chem Int Ed Engl. 2018 May 11. doi: 10.1002/anie.201802288. [Epub ahead of print]

PMID:
29749673
2.

Engineered Production of Short-Chain Acyl-Coenzyme A Esters in Saccharomyces cerevisiae.

Krink-Koutsoubelis N, Loechner AC, Lechner A, Link H, Denby CM, Vögeli B, Erb TJ, Yuzawa S, Jakociunas T, Katz L, Jensen MK, Sourjik V, Keasling JD.

ACS Synth Biol. 2018 Apr 20;7(4):1105-1115. doi: 10.1021/acssynbio.7b00466. Epub 2018 Mar 12.

3.

Stimulus sensing and signal processing in bacterial chemotaxis.

Bi S, Sourjik V.

Curr Opin Microbiol. 2018 Feb 20;45:22-29. doi: 10.1016/j.mib.2018.02.002. [Epub ahead of print] Review.

PMID:
29459288
4.

FRET Analysis of the Chemotaxis Pathway Response.

Paulick A, Sourjik V.

Methods Mol Biol. 2018;1729:107-126. doi: 10.1007/978-1-4939-7577-8_11.

PMID:
29429087
5.

Sharing of Phosphatases Promotes Response Plasticity in Phosphorylation Cascades.

Ghosh B, Sarma U, Sourjik V, Legewie S.

Biophys J. 2018 Jan 9;114(1):223-236. doi: 10.1016/j.bpj.2017.10.037.

PMID:
29320690
6.

Autoinducer 2-dependent Escherichia coli biofilm formation is enhanced in a dual-species co-culture.

Laganenka L, Sourjik V.

Appl Environ Microbiol. 2017 Dec 21. pii: AEM.02638-17. doi: 10.1128/AEM.02638-17. [Epub ahead of print]

7.

Transmembrane region of bacterial chemoreceptor is capable of promoting protein clustering.

Pollard AM, Sourjik V.

J Biol Chem. 2018 Feb 9;293(6):2149-2158. doi: 10.1074/jbc.M117.796722. Epub 2017 Dec 19.

PMID:
29259129
8.

Multiple sources of slow activity fluctuations in a bacterial chemosensory network.

Colin R, Rosazza C, Vaknin A, Sourjik V.

Elife. 2017 Dec 12;6. pii: e26796. doi: 10.7554/eLife.26796.

9.

Osmosensing by the bacterial PhoQ/PhoP two-component system.

Yuan J, Jin F, Glatter T, Sourjik V.

Proc Natl Acad Sci U S A. 2017 Dec 12;114(50):E10792-E10798. doi: 10.1073/pnas.1717272114. Epub 2017 Nov 28.

10.

Drift and Behavior of E. coli Cells.

Micali G, Colin R, Sourjik V, Endres RG.

Biophys J. 2017 Dec 5;113(11):2321-2325. doi: 10.1016/j.bpj.2017.09.031. Epub 2017 Oct 27.

PMID:
29111155
11.

Mechanism of bidirectional thermotaxis in Escherichia coli.

Paulick A, Jakovljevic V, Zhang S, Erickstad M, Groisman A, Meir Y, Ryu WS, Wingreen NS, Sourjik V.

Elife. 2017 Aug 3;6. pii: e26607. doi: 10.7554/eLife.26607.

12.

Emergent properties of bacterial chemotaxis pathway.

Colin R, Sourjik V.

Curr Opin Microbiol. 2017 Oct;39:24-33. doi: 10.1016/j.mib.2017.07.004. Epub 2017 Aug 17. Review.

PMID:
28822274
13.

Evolutionary Remodeling of Bacterial Motility Checkpoint Control.

Ni B, Ghosh B, Paldy FS, Colin R, Heimerl T, Sourjik V.

Cell Rep. 2017 Jan 24;18(4):866-877. doi: 10.1016/j.celrep.2016.12.088.

14.

Corrigendum: Chemotaxis towards autoinducer 2 mediates autoaggregation in Escherichia coli.

Laganenka L, Colin R, Sourjik V.

Nat Commun. 2016 Dec 15;7:13979. doi: 10.1038/ncomms13979. No abstract available.

15.

Diversification of Gene Expression during Formation of Static Submerged Biofilms by Escherichia coli.

Besharova O, Suchanek VM, Hartmann R, Drescher K, Sourjik V.

Front Microbiol. 2016 Oct 5;7:1568. eCollection 2016.

16.

Chemotaxis towards autoinducer 2 mediates autoaggregation in Escherichia coli.

Laganenka L, Colin R, Sourjik V.

Nat Commun. 2016 Sep 30;7:12984. doi: 10.1038/ncomms12984.

17.

Sensory input attenuation allows predictive sexual response in yeast.

Banderas A, Koltai M, Anders A, Sourjik V.

Nat Commun. 2016 Aug 25;7:12590. doi: 10.1038/ncomms12590.

18.

Sugar Influx Sensing by the Phosphotransferase System of Escherichia coli.

Somavanshi R, Ghosh B, Sourjik V.

PLoS Biol. 2016 Aug 24;14(8):e2000074. doi: 10.1371/journal.pbio.2000074. eCollection 2016 Aug.

19.

Engineering Hybrid Chemotaxis Receptors in Bacteria.

Bi S, Pollard AM, Yang Y, Jin F, Sourjik V.

ACS Synth Biol. 2016 Sep 16;5(9):989-1001. doi: 10.1021/acssynbio.6b00053. Epub 2016 Jun 10.

PMID:
27285081
20.

A FRET-based study reveals site-specific regulation of spindle position checkpoint proteins at yeast centrosomes.

Gryaznova Y, Koca Caydasi A, Malengo G, Sourjik V, Pereira G.

Elife. 2016 May 9;5. pii: e14029. doi: 10.7554/eLife.14029.

21.

Importance of Multiple Methylation Sites in Escherichia coli Chemotaxis.

Krembel A, Colin R, Sourjik V.

PLoS One. 2015 Dec 18;10(12):e0145582. doi: 10.1371/journal.pone.0145582. eCollection 2015.

22.

Bacterial Networks in Cells and Communities.

Sourjik V, Vorholt JA.

J Mol Biol. 2015 Nov 20;427(23):3785-92. doi: 10.1016/j.jmb.2015.10.016. Epub 2015 Oct 24. Review.

PMID:
26506266
23.

Bacterial protein networks: properties and functions.

Typas A, Sourjik V.

Nat Rev Microbiol. 2015 Sep;13(9):559-72. doi: 10.1038/nrmicro3508. Epub 2015 Aug 10. Review.

PMID:
26256789
24.

Specific gamma-aminobutyrate chemotaxis in pseudomonads with different lifestyle.

Reyes-Darias JA, García V, Rico-Jiménez M, Corral-Lugo A, Lesouhaitier O, Juárez-Hernández D, Yang Y, Bi S, Feuilloley M, Muñoz-Rojas J, Sourjik V, Krell T.

Mol Microbiol. 2015 Aug;97(3):488-501. doi: 10.1111/mmi.13045. Epub 2015 May 26.

25.

A gateway-based system for fast evaluation of protein-protein interactions in bacteria.

Wille T, Barlag B, Jakovljevic V, Hensel M, Sourjik V, Gerlach RG.

PLoS One. 2015 Apr 9;10(4):e0123646. doi: 10.1371/journal.pone.0123646. eCollection 2015.

26.

Relation between chemotaxis and consumption of amino acids in bacteria.

Yang Y, M Pollard A, Höfler C, Poschet G, Wirtz M, Hell R, Sourjik V.

Mol Microbiol. 2015 Jun;96(6):1272-82. doi: 10.1111/mmi.13006. Epub 2015 Apr 24.

27.

Correlation between signal input and output in PctA and PctB amino acid chemoreceptor of Pseudomonas aeruginosa.

Reyes-Darias JA, Yang Y, Sourjik V, Krell T.

Mol Microbiol. 2015 May;96(3):513-25. doi: 10.1111/mmi.12953. Epub 2015 Mar 4.

28.

Universal response-adaptation relation in bacterial chemotaxis.

Krembel AK, Neumann S, Sourjik V.

J Bacteriol. 2015 Jan;197(2):307-13. doi: 10.1128/JB.02171-14. Epub 2014 Nov 3.

29.

Predicting chemical environments of bacteria from receptor signaling.

Clausznitzer D, Micali G, Neumann S, Sourjik V, Endres RG.

PLoS Comput Biol. 2014 Oct 23;10(10):e1003870. doi: 10.1371/journal.pcbi.1003870. eCollection 2014 Oct.

30.

Secondary bacterial flagellar system improves bacterial spreading by increasing the directional persistence of swimming.

Bubendorfer S, Koltai M, Rossmann F, Sourjik V, Thormann KM.

Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11485-90. doi: 10.1073/pnas.1405820111. Epub 2014 Jul 21.

31.

Editorial overview: Systems biology: Advances in multi-scale systems biology applications.

Sourjik V, Metallo C.

Curr Opin Biotechnol. 2014 Aug;28:vi-viii. doi: 10.1016/j.copbio.2014.06.016. Epub 2014 Jul 1. No abstract available.

PMID:
24996482
32.

Exponential signaling gain at the receptor level enhances signal-to-noise ratio in bacterial chemotaxis.

Neumann S, Løvdok L, Bentele K, Meisig J, Ullner E, Paldy FS, Sourjik V, Kollmann M.

PLoS One. 2014 Apr 15;9(4):e87815. doi: 10.1371/journal.pone.0087815. eCollection 2014.

33.

Imprecision of adaptation in Escherichia coli chemotaxis.

Neumann S, Vladimirov N, Krembel AK, Wingreen NS, Sourjik V.

PLoS One. 2014 Jan 8;9(1):e84904. doi: 10.1371/journal.pone.0084904. eCollection 2014.

34.

The sensory histidine kinases TorS and EvgS tend to form clusters in Escherichia coli cells.

Sommer E, Koler M, Frank V, Sourjik V, Vaknin A.

PLoS One. 2013 Oct 11;8(10):e77708. doi: 10.1371/journal.pone.0077708. eCollection 2013.

35.

SiiA and SiiB are novel type I secretion system subunits controlling SPI4-mediated adhesion of Salmonella enterica.

Wille T, Wagner C, Mittelstädt W, Blank K, Sommer E, Malengo G, Döhler D, Lange A, Sourjik V, Hensel M, Gerlach RG.

Cell Microbiol. 2014 Feb;16(2):161-78. doi: 10.1111/cmi.12222. Epub 2013 Nov 5.

PMID:
24119191
36.

Discovery of novel chemoeffectors and rational design of Escherichia coli chemoreceptor specificity.

Bi S, Yu D, Si G, Luo C, Li T, Ouyang Q, Jakovljevic V, Sourjik V, Tu Y, Lai L.

Proc Natl Acad Sci U S A. 2013 Oct 15;110(42):16814-9. doi: 10.1073/pnas.1306811110. Epub 2013 Sep 30.

37.

Chromosome segregation by the Escherichia coli Min system.

Di Ventura B, Knecht B, Andreas H, Godinez WJ, Fritsche M, Rohr K, Nickel W, Heermann DW, Sourjik V.

Mol Syst Biol. 2013;9:686. doi: 10.1038/msb.2013.44.

38.

The β-sliding clamp directs the localization of HdaA to the replisome in Caulobacter crescentus.

Fernandez-Fernandez C, Grosse K, Sourjik V, Collier J.

Microbiology. 2013 Nov;159(Pt 11):2237-48. doi: 10.1099/mic.0.068577-0. Epub 2013 Aug 23.

39.

Genome-scale co-evolutionary inference identifies functions and clients of bacterial Hsp90.

Press MO, Li H, Creanza N, Kramer G, Queitsch C, Sourjik V, Borenstein E.

PLoS Genet. 2013;9(7):e1003631. doi: 10.1371/journal.pgen.1003631. Epub 2013 Jul 11.

40.

Bacterial regulatory networks--from self-organizing molecules to cell shape and patterns in bacterial communities.

Hengge R, Sourjik V.

EMBO Rep. 2013 Aug;14(8):667-9. doi: 10.1038/embor.2013.93. Epub 2013 Jul 12.

41.

Hsp70 proteins bind Hsp100 regulatory M domains to activate AAA+ disaggregase at aggregate surfaces.

Seyffer F, Kummer E, Oguchi Y, Winkler J, Kumar M, Zahn R, Sourjik V, Bukau B, Mogk A.

Nat Struct Mol Biol. 2012 Dec;19(12):1347-55. doi: 10.1038/nsmb.2442. Epub 2012 Nov 18.

PMID:
23160352
42.

Opposite responses by different chemoreceptors set a tunable preference point in Escherichia coli pH taxis.

Yang Y, Sourjik V.

Mol Microbiol. 2012 Dec;86(6):1482-9. doi: 10.1111/mmi.12070. Epub 2012 Nov 5.

43.

Chemotactic signaling via carbohydrate phosphotransferase systems in Escherichia coli.

Neumann S, Grosse K, Sourjik V.

Proc Natl Acad Sci U S A. 2012 Jul 24;109(30):12159-64. doi: 10.1073/pnas.1205307109. Epub 2012 Jul 9.

44.

The energy-speed-accuracy tradeoff in sensory adaptation.

Lan G, Sartori P, Neumann S, Sourjik V, Tu Y.

Nat Phys. 2012 May 1;8(5):422-428. Epub 2012 Mar 25.

45.

Physical map and dynamics of the chaperone network in Escherichia coli.

Kumar M, Sourjik V.

Mol Microbiol. 2012 May;84(4):736-47. doi: 10.1111/j.1365-2958.2012.08054.x. Epub 2012 Apr 16.

46.

Robust signal processing in living cells.

Steuer R, Waldherr S, Sourjik V, Kollmann M.

PLoS Comput Biol. 2011 Nov;7(11):e1002218. doi: 10.1371/journal.pcbi.1002218. Epub 2011 Nov 17.

47.

Energy complexes are apparently associated with the switch-motor complex of bacterial flagella.

Zarbiv G, Li H, Wolf A, Cecchini G, Caplan SR, Sourjik V, Eisenbach M.

J Mol Biol. 2012 Feb 17;416(2):192-207. doi: 10.1016/j.jmb.2011.12.027. Epub 2011 Dec 19.

48.

Responding to chemical gradients: bacterial chemotaxis.

Sourjik V, Wingreen NS.

Curr Opin Cell Biol. 2012 Apr;24(2):262-8. doi: 10.1016/j.ceb.2011.11.008. Epub 2011 Dec 9. Review.

49.

Effects of receptor modification and temperature on dynamics of sensory complexes in Escherichia coli chemotaxis.

Schulmeister S, Grosse K, Sourjik V.

BMC Microbiol. 2011 Oct 6;11:222. doi: 10.1186/1471-2180-11-222.

50.

Thermal robustness of signaling in bacterial chemotaxis.

Oleksiuk O, Jakovljevic V, Vladimirov N, Carvalho R, Paster E, Ryu WS, Meir Y, Wingreen NS, Kollmann M, Sourjik V.

Cell. 2011 Apr 15;145(2):312-21. doi: 10.1016/j.cell.2011.03.013.

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