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Items: 35

1.

Deciphering the Link between Doubly Uniparental Inheritance of mtDNA and Sex Determination in Bivalves: Clues from Comparative Transcriptomics.

Capt C, Renaut S, Ghiselli F, Milani L, Johnson NA, Sietman BE, Stewart DT, Breton S.

Genome Biol Evol. 2018 Feb 1;10(2):577-590. doi: 10.1093/gbe/evy019.

2.

A multi-disciplinary perspective on emergent and future innovations in peer review.

Tennant JP, Dugan JM, Graziotin D, Jacques DC, Waldner F, Mietchen D, Elkhatib Y, B Collister L, Pikas CK, Crick T, Masuzzo P, Caravaggi A, Berg DR, Niemeyer KE, Ross-Hellauer T, Mannheimer S, Rigling L, Katz DS, Greshake Tzovaras B, Pacheco-Mendoza J, Fatima N, Poblet M, Isaakidis M, Irawan DE, Renaut S, Madan CR, Matthias L, Nørgaard Kjær J, O'Donnell DP, Neylon C, Kearns S, Selvaraju M, Colomb J.

Version 3. F1000Res. 2017 Jul 20 [revised 2017 Jan 1];6:1151. doi: 10.12688/f1000research.12037.3. eCollection 2017. Review.

4.

Genome sequencing: Illuminating the sunflower genome.

Renaut S.

Nat Plants. 2017 Jun 12;3:17099. doi: 10.1038/nplants.2017.99. No abstract available.

PMID:
28604680
5.

Plant Community and Nitrogen Deposition as Drivers of Alpha and Beta Diversities of Prokaryotes in Reconstructed Oil Sand Soils and Natural Boreal Forest Soils.

Masse J, Prescott CE, Renaut S, Terrat Y, Grayston SJ.

Appl Environ Microbiol. 2017 Apr 17;83(9). pii: e03319-16. doi: 10.1128/AEM.03319-16. Print 2017 May 1.

6.

Phytogeographic and genetic variation in Sorbus, a traditional antidiabetic medicine-adaptation in action in both a plant and a discipline.

Bailie A, Renaut S, Ubalijoro E, Guerrero-Analco JA, Saleem A, Haddad P, Arnason JT, Johns T, Cuerrier A.

PeerJ. 2016 Nov 3;4:e2645. eCollection 2016.

7.

History repeats itself: genomic divergence in copepods.

Renaut S, Dion-Côté AM.

Mol Ecol. 2016 Apr;25(7):1417-9. doi: 10.1111/mec.13577.

PMID:
27012819
8.

Assessing the reproducibility of discriminant function analyses.

Andrew RL, Albert AY, Renaut S, Rennison DJ, Bock DG, Vines T.

PeerJ. 2015 Aug 4;3:e1137. doi: 10.7717/peerj.1137. eCollection 2015.

9.

The Accumulation of Deleterious Mutations as a Consequence of Domestication and Improvement in Sunflowers and Other Compositae Crops.

Renaut S, Rieseberg LH.

Mol Biol Evol. 2015 Sep;32(9):2273-83. doi: 10.1093/molbev/msv106. Epub 2015 May 4.

PMID:
25939650
10.

Genomics of homoploid hybrid speciation: diversity and transcriptional activity of long terminal repeat retrotransposons in hybrid sunflowers.

Renaut S, Rowe HC, Ungerer MC, Rieseberg LH.

Philos Trans R Soc Lond B Biol Sci. 2014 Aug 5;369(1648). pii: 20130345. doi: 10.1098/rstb.2013.0345.

11.

Chromosomal evolution and patterns of introgression in helianthus.

Barb JG, Bowers JE, Renaut S, Rey JI, Knapp SJ, Rieseberg LH, Burke JM.

Genetics. 2014 Jul;197(3):969-79. doi: 10.1534/genetics.114.165548. Epub 2014 Apr 26.

12.

RNA-seq reveals transcriptomic shock involving transposable elements reactivation in hybrids of young lake whitefish species.

Dion-Côté AM, Renaut S, Normandeau E, Bernatchez L.

Mol Biol Evol. 2014 May;31(5):1188-99. doi: 10.1093/molbev/msu069. Epub 2014 Feb 6. Erratum in: Mol Biol Evol. 2014 Jun;31(6):1640.

PMID:
24505119
13.

Shared selective pressure and local genomic landscape lead to repeatable patterns of genomic divergence in sunflowers.

Renaut S, Owens GL, Rieseberg LH.

Mol Ecol. 2014 Feb;23(2):311-24. doi: 10.1111/mec.12600. Epub 2013 Dec 28.

PMID:
26010734
14.

The availability of research data declines rapidly with article age.

Vines TH, Albert AY, Andrew RL, Débarre F, Bock DG, Franklin MT, Gilbert KJ, Moore JS, Renaut S, Rennison DJ.

Curr Biol. 2014 Jan 6;24(1):94-7. doi: 10.1016/j.cub.2013.11.014. Epub 2013 Dec 19.

15.

Advances in Ecological Speciation: an integrative approach.

Faria R, Renaut S, Galindo J, Pinho C, Melo-Ferreira J, Melo M, Jones F, Salzburger W, Schluter D, Butlin R.

Mol Ecol. 2014 Feb;23(3):513-21. doi: 10.1111/mec.12616.

PMID:
24354648
16.
17.
18.

Genomic resources notes accepted 1 February 2013-31 March 2013.

Genomic Resources Development Consortium, King MG, Renaut S, Rieseberg LH, Rowe HC.

Mol Ecol Resour. 2013 Jul;13(4):759. doi: 10.1111/1755-0998.12123. Epub 2013 May 23.

PMID:
23702101
19.

Genomic islands of divergence are not affected by geography of speciation in sunflowers.

Renaut S, Grassa CJ, Yeaman S, Moyers BT, Lai Z, Kane NC, Bowers JE, Burke JM, Rieseberg LH.

Nat Commun. 2013;4:1827. doi: 10.1038/ncomms2833.

PMID:
23652015
20.

Mandated data archiving greatly improves access to research data.

Vines TH, Andrew RL, Bock DG, Franklin MT, Gilbert KJ, Kane NC, Moore JS, Moyers BT, Renaut S, Rennison DJ, Veen T, Yeaman S.

FASEB J. 2013 Apr;27(4):1304-8. doi: 10.1096/fj.12-218164. Epub 2013 Jan 3.

PMID:
23288929
21.

Recommendations for utilizing and reporting population genetic analyses: the reproducibility of genetic clustering using the program STRUCTURE.

Gilbert KJ, Andrew RL, Bock DG, Franklin MT, Kane NC, Moore JS, Moyers BT, Renaut S, Rennison DJ, Veen T, Vines TH.

Mol Ecol. 2012 Oct;21(20):4925-30. doi: 10.1111/j.1365-294X.2012.05754.x. Epub 2012 Sep 24.

PMID:
22998190
22.

The Population Genomics of Sunflowers and Genomic Determinants of Protein Evolution Revealed by RNAseq.

Renaut S, Grassa CJ, Moyers BT, Kane NC, Rieseberg LH.

Biology (Basel). 2012 Oct 25;1(3):575-96. doi: 10.3390/biology1030575.

23.

Genome-wide patterns of divergence during speciation: the lake whitefish case study.

Renaut S, Maillet N, Normandeau E, Sauvage C, Derome N, Rogers SM, Bernatchez L.

Philos Trans R Soc Lond B Biol Sci. 2012 Feb 5;367(1587):354-63. doi: 10.1098/rstb.2011.0197.

24.

RAD in the realm of next-generation sequencing technologies.

Rowe HC, Renaut S, Guggisberg A.

Mol Ecol. 2011 Sep;20(17):3499-502.

PMID:
21991593
25.

Contemporary hybrid speciation in sculpins (Cottus spp.).

Renaut S.

Mol Ecol. 2011 Apr;20(7):1320-1. doi: 10.1111/j.1365-294X.2010.04998.x.

PMID:
21426430
26.

SNP signatures of selection on standing genetic variation and their association with adaptive phenotypes along gradients of ecological speciation in lake whitefish species pairs (Coregonus spp.).

Renaut S, Nolte AW, Rogers SM, Derome N, Bernatchez L.

Mol Ecol. 2011 Feb;20(3):545-59. doi: 10.1111/j.1365-294X.2010.04952.x. Epub 2010 Dec 9.

PMID:
21143332
27.
28.

The transcriptomics of sympatric dwarf and normal lake whitefish (Coregonus clupeaformis spp., Salmonidae) divergence as revealed by next-generation sequencing.

Jeukens J, Renaut S, St-Cyr J, Nolte AW, Bernatchez L.

Mol Ecol. 2010 Dec;19(24):5389-403. doi: 10.1111/j.1365-294X.2010.04934.x. Epub 2010 Nov 19.

PMID:
21087448
29.

On the origin of species: insights from the ecological genomics of lake whitefish.

Bernatchez L, Renaut S, Whiteley AR, Derome N, Jeukens J, Landry L, Lu G, Nolte AW, Ostbye K, Rogers SM, St-Cyr J.

Philos Trans R Soc Lond B Biol Sci. 2010 Jun 12;365(1547):1783-800. doi: 10.1098/rstb.2009.0274. Review.

30.

Mining transcriptome sequences towards identifying adaptive single nucleotide polymorphisms in lake whitefish species pairs (Coregonus spp. Salmonidae).

Renaut S, Nolte AW, Bernatchez L.

Mol Ecol. 2010 Mar;19 Suppl 1:115-31. doi: 10.1111/j.1365-294X.2009.04477.x.

PMID:
20331775
31.

Divergence in gene regulation at young life history stages of whitefish (Coregonus sp.) and the emergence of genomic isolation.

Nolte AW, Renaut S, Bernatchez L.

BMC Evol Biol. 2009 Mar 16;9:59. doi: 10.1186/1471-2148-9-59.

32.

Gene expression divergence and hybrid misexpression between lake whitefish species pairs (Coregonus spp. Salmonidae).

Renaut S, Nolte AW, Bernatchez L.

Mol Biol Evol. 2009 Apr;26(4):925-36. doi: 10.1093/molbev/msp017. Epub 2009 Jan 27.

PMID:
19174479
33.

The phenomics and expression quantitative trait locus mapping of brain transcriptomes regulating adaptive divergence in lake whitefish species pairs (Coregonus sp.).

Whiteley AR, Derome N, Rogers SM, St-Cyr J, Laroche J, Labbe A, Nolte A, Renaut S, Jeukens J, Bernatchez L.

Genetics. 2008 Sep;180(1):147-64. doi: 10.1534/genetics.108.089938. Epub 2008 Aug 30.

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