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Items: 24

1.

Exploring public genomics data for population pharmacogenomics.

Lakiotaki K, Kanterakis A, Kartsaki E, Katsila T, Patrinos GP, Potamias G.

PLoS One. 2017 Aug 3;12(8):e0182138. doi: 10.1371/journal.pone.0182138. eCollection 2017.

2.

minepath.org: a free interactive pathway analysis web server.

Koumakis L, Roussos P, Potamias G.

Nucleic Acids Res. 2017 Jul 3;45(W1):W116-W121. doi: 10.1093/nar/gkx278.

3.

MinePath: Mining for Phenotype Differential Sub-paths in Molecular Pathways.

Koumakis L, Kanterakis A, Kartsaki E, Chatzimina M, Zervakis M, Tsiknakis M, Vassou D, Kafetzopoulos D, Marias K, Moustakis V, Potamias G.

PLoS Comput Biol. 2016 Nov 10;12(11):e1005187. doi: 10.1371/journal.pcbi.1005187. eCollection 2016 Nov.

4.

ePGA: A Web-Based Information System for Translational Pharmacogenomics.

Lakiotaki K, Kartsaki E, Kanterakis A, Katsila T, Patrinos GP, Potamias G.

PLoS One. 2016 Sep 15;11(9):e0162801. doi: 10.1371/journal.pone.0162801. eCollection 2016.

5.

PyPedia: using the wiki paradigm as crowd sourcing environment for bioinformatics protocols.

Kanterakis A, Kuiper J, Potamias G, Swertz MA.

Source Code Biol Med. 2015 Nov 19;10:14. doi: 10.1186/s13029-015-0042-6. eCollection 2015.

6.

Integrating Microarray Data and GRNs.

Koumakis L, Potamias G, Tsiknakis M, Zervakis M, Moustakis V.

Methods Mol Biol. 2016;1375:137-53. doi: 10.1007/7651_2015_252.

PMID:
26134183
7.

Standardized data sharing in a paediatric oncology research network--a proof-of-concept study.

Hochedlinger N, Nitzlnader M, Falgenhauer M, Welte S, Hayn D, Koumakis L, Potamias G, Tsiknakis M, Saraceno D, Rinaldi E, Ladenstein R, Schreier G.

Stud Health Technol Inform. 2015;212:27-34.

PMID:
26063254
8.

Deciphering next-generation pharmacogenomics: an information technology perspective.

Potamias G, Lakiotaki K, Katsila T, Lee MT, Topouzis S, Cooper DN, Patrinos GP.

Open Biol. 2014 Jul;4(7). pii: 140071. doi: 10.1098/rsob.140071.

9.

Modeling susceptibility to periodontitis.

Laine ML, Moustakis V, Koumakis L, Potamias G, Loos BG.

J Dent Res. 2013 Jan;92(1):45-50. doi: 10.1177/0022034512465435. Epub 2012 Oct 25. Erratum in: J Dent Res. 2013 Jun;92(6):566.

PMID:
23100272
10.

Nanoinformatics: developing new computing applications for nanomedicine.

Maojo V, Fritts M, Martin-Sanchez F, De la Iglesia D, Cachau RE, Garcia-Remesal M, Crespo J, Mitchell JA, Anguita A, Baker N, Barreiro JM, Benitez SE, De la Calle G, Facelli JC, Ghazal P, Geissbuhler A, Gonzalez-Nilo F, Graf N, Grangeat P, Hermosilla I, Hussein R, Kern J, Koch S, Legre Y, Lopez-Alonso V, Lopez-Campos G, Milanesi L, Moustakis V, Munteanu C, Otero P, Pazos A, Perez-Rey D, Potamias G, Sanz F, Kulikowski C.

Comput Sci Eng. 2012 Jun 1;94(6):521-539. Epub 2012 Mar 7.

11.

Multi-platform data integration in microarray analysis.

Tsiliki G, Zervakis M, Ioannou M, Sanidas E, Stathopoulos E, Potamias G, Tsiknakis M, Kafetzopoulos D.

IEEE Trans Inf Technol Biomed. 2011 Nov;15(6):806-12. doi: 10.1109/TITB.2011.2158232.

PMID:
22113338
12.

International efforts in nanoinformatics research applied to nanomedicine.

de la Iglesia D, Maojo V, Chiesa S, Martin-Sanchez F, Kern J, Potamias G, Crespo J, Garcia-Remesal M, Keuchkerian S, Kulikowski C, Mitchell JA.

Methods Inf Med. 2011;50(1):84-95. doi: 10.3414/ME10-02-0012. Epub 2010 Nov 18.

PMID:
21085742
13.

Scientific discovery workflows in bioinformatics: a scenario for the coupling of molecular regulatory pathways and gene-expression profiles.

Kanterakis A, Potamias G, Zacharioudakis G, Koumakis L, Sfakianakis S, Tsiknakis M.

Stud Health Technol Inform. 2010;160(Pt 2):1304-8.

PMID:
20841895
14.

Supporting genotype-to-phenotype association studies with grid-enabled knowledge discovery workflows.

Koumakis L, Moustakis V, Tsiknakis M, Kafetzopoulos D, Potamias G.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:6958-62. doi: 10.1109/IEMBS.2009.5333882.

PMID:
19964717
15.

A semantically aware platform for the authoring and secure enactment of bioinformatics workflows.

Tsiknakis M, Sfakianakis S, Zacharioudakis G, Umakis L, Kanterakis A, Potamias G, Kafetzopoulos D.

Conf Proc IEEE Eng Med Biol Soc. 2009;2009:5625-8. doi: 10.1109/IEMBS.2009.5333787.

PMID:
19964401
16.

Nanoinformatics: new challenges for biomedical informatics at the nano level.

De La Iglesia D, Chiesa S, Kern J, Maojo V, Martin-Sanchez F, Potamias G, Moustakis V, Mitchell JA.

Stud Health Technol Inform. 2009;150:987-91.

PMID:
19745461
17.

European efforts in nanoinformatics research applied to nanomedicine.

Chiesa S, De La Iglesia D, Crespo J, Martin-Sanchez F, Kern J, Potamias G, Maojo V.

Stud Health Technol Inform. 2009;150:757-61.

PMID:
19745412
18.

A semantic grid infrastructure enabling integrated access and analysis of multilevel biomedical data in support of postgenomic clinical trials on cancer.

Tsiknakis M, Brochhausen M, Nabrzyski J, Pucacki J, Sfakianakis SG, Potamias G, Desmedt C, Kafetzopoulos D.

IEEE Trans Inf Technol Biomed. 2008 Mar;12(2):205-17. doi: 10.1109/TITB.2007.903519.

PMID:
18348950
19.

Functional specifications of an integrated proteomics information management and analysis platform.

Tsiknakis M, Grangeat P, Binz PA, Potamias G, Lisacek F, Gerfault L, Paulus C, Manakanatas D, Kritsotakis V, Kondylakis H, Perez M, Plexousakis D, Kaforou S, Kafetzopoulos D.

Conf Proc IEEE Eng Med Biol Soc. 2007;2007:6065-9.

PMID:
18003398
20.

A 10-year aerobiological study (1994-2003) in the Mediterranean island of Crete, Greece: grasses and other weeds, aerobiological data, and botanical and clinical correlations.

Gonianakis M, Neonakis I, Gonianakis I, Baritaki M, Kypriotakis Z, Potamias G, Bouros D, Kontou-Fili K.

Allergy Asthma Proc. 2006 Sep-Oct;27(5):363-70.

PMID:
17063665
21.

Mold allergy in the Mediterranean Island of Crete, Greece: a 10-year volumetric, aerobiological study with dermal sensitization correlations.

Gonianakis MI, Neonakis IK, Gonianakis IM, Baritaki MA, Bouros D, Potamias G, Kontou-Fili KS.

Allergy Asthma Proc. 2006 Sep-Oct;27(5):354-62.

PMID:
17063664
22.

Building a European biomedical grid on cancer: the ACGT Integrated Project.

Tsiknakis M, Kafetzopoulos D, Potamias G, Analyti A, Marias K, Manganas A.

Stud Health Technol Inform. 2006;120:247-58.

PMID:
16823143
23.

Protein synthesis profiling in the developing brain: a graph theoretic clustering approach.

Potamias G, Dermon CR.

Comput Methods Programs Biomed. 2004 Nov;76(2):115-29.

PMID:
15451161
24.

Role-based access to patients clinical data: the InterCare approach in the region of Crete.

Potamias G, Tsiknakis M, Katehakis D, Karabela E, Moustakis V, Orphanoudakis S.

Stud Health Technol Inform. 2000;77:1074-9.

PMID:
11187486

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