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Sleep patterns predictive of daytime challenging behavior in individuals with low-functioning autism.

Cohen S, Fulcher BD, Rajaratnam SMW, Conduit R, Sullivan JP, St Hilaire MA, Phillips AJK, Loddenkemper T, Kothare SV, McConnell K, Braga-Kenyon P, Ahearn W, Shlesinger A, Potter J, Bird F, Cornish KM, Lockley SW.

Autism Res. 2018 Feb;11(2):391-403. doi: 10.1002/aur.1899. Epub 2017 Dec 1.


Behaviorally-determined sleep phenotypes are robustly associated with adaptive functioning in individuals with low functioning autism.

Cohen S, Fulcher BD, Rajaratnam SMW, Conduit R, Sullivan JP, Hilaire MAS, Phillips AJ, Loddenkemper T, Kothare SV, McConnell K, Ahearn W, Braga-Kenyon P, Shlesinger A, Potter J, Bird F, Cornish KM, Lockley SW.

Sci Rep. 2017 Oct 27;7(1):14228. doi: 10.1038/s41598-017-14611-6.


Modeling the adenosine system as a modulator of cognitive performance and sleep patterns during sleep restriction and recovery.

Phillips AJK, Klerman EB, Butler JP.

PLoS Comput Biol. 2017 Oct 26;13(10):e1005759. doi: 10.1371/journal.pcbi.1005759. eCollection 2017 Oct.


Comparative genome and transcriptome analyses reveal adaptations to opportunistic infections in woody plant degrading pathogens of Botryosphaeriaceae.

Yan JY, Zhao WS, Chen Z, Xing QK, Zhang W, Chethana KWT, Xue MF, Xu JP, Phillips AJL, Wang Y, Liu JH, Liu M, Zhou Y, Jayawardena RS, Manawasinghe IS, Huang JB, Qiao GH, Fu CY, Guo FF, Dissanayake AJ, Peng YL, Hyde KD, Li XH.

DNA Res. 2017 Oct 3. doi: 10.1093/dnares/dsx040. [Epub ahead of print]


Phylogenetic revision of Camarosporium (Pleosporineae, Dothideomycetes) and allied genera.

Wanasinghe DN, Hyde KD, Jeewon R, Crous PW, Wijayawardene NN, Jones EBG, Bhat DJ, Phillips AJL, Groenewald JZ, Dayarathne MC, Phukhamsakda C, Thambugala KM, Bulgakov TS, Camporesi E, Gafforov YS, Mortimer PE, Karunarathna SC.

Stud Mycol. 2017 Jun;87:207-256. doi: 10.1016/j.simyco.2017.08.001. Epub 2017 Aug 23.


Families of Diaporthales based on morphological and phylogenetic evidence.

Senanayake IC, Crous PW, Groenewald JZ, Maharachchikumbura SSN, Jeewon R, Phillips AJL, Bhat JD, Perera RH, Li QR, Li WJ, Tangthirasunun N, Norphanphoun C, Karunarathna SC, Camporesi E, Manawasighe IS, Al-Sadi AM, Hyde KD.

Stud Mycol. 2017 Mar;86:217-296. doi: 10.1016/j.simyco.2017.07.003. Epub 2017 Aug 1.


Parasite biodiversity faces extinction and redistribution in a changing climate.

Carlson CJ, Burgio KR, Dougherty ER, Phillips AJ, Bueno VM, Clements CF, Castaldo G, Dallas TA, Cizauskas CA, Cumming GS, Doña J, Harris NC, Jovani R, Mironov S, Muellerklein OC, Proctor HC, Getz WM.

Sci Adv. 2017 Sep 6;3(9):e1602422. doi: 10.1126/sciadv.1602422. eCollection 2017 Sep.


Later circadian timing of food intake is associated with increased body fat.

McHill AW, Phillips AJ, Czeisler CA, Keating L, Yee K, Barger LK, Garaulet M, Scheer FA, Klerman EB.

Am J Clin Nutr. 2017 Nov;106(5):1213-1219. doi: 10.3945/ajcn.117.161588. Epub 2017 Sep 6.


CCR7 Sulfotyrosine Enhances CCL21 Binding.

Phillips AJ, Taleski D, Koplinski CA, Getschman AE, Moussouras NA, Richard AM, Peterson FC, Dwinell MB, Volkman BF, Payne RJ, Veldkamp CT.

Int J Mol Sci. 2017 Aug 25;18(9). pii: E1857. doi: 10.3390/ijms18091857.


Small-molecule studies identify CDK8 as a regulator of IL-10 in myeloid cells.

Johannessen L, Sundberg TB, O'Connell DJ, Kolde R, Berstler J, Billings KJ, Khor B, Seashore-Ludlow B, Fassl A, Russell CN, Latorre IJ, Jiang B, Graham DB, Perez JR, Sicinski P, Phillips AJ, Schreiber SL, Gray NS, Shamji AF, Xavier RJ.

Nat Chem Biol. 2017 Oct;13(10):1102-1108. doi: 10.1038/nchembio.2458. Epub 2017 Aug 14.


Parasite Microbiome Project: Systematic Investigation of Microbiome Dynamics within and across Parasite-Host Interactions.

Dheilly NM, Bolnick D, Bordenstein S, Brindley PJ, Figuères C, Holmes EC, Martínez Martínez J, Phillips AJ, Poulin R, Rosario K.

mSystems. 2017 Jul 18;2(4). pii: e00050-17. doi: 10.1128/mSystems.00050-17. eCollection 2017 Jul-Aug.


Irregular sleep/wake patterns are associated with poorer academic performance and delayed circadian and sleep/wake timing.

Phillips AJK, Clerx WM, O'Brien CS, Sano A, Barger LK, Picard RW, Lockley SW, Klerman EB, Czeisler CA.

Sci Rep. 2017 Jun 12;7(1):3216. doi: 10.1038/s41598-017-03171-4.


Are Individual Differences in Sleep and Circadian Timing Amplified by Use of Artificial Light Sources?

Swaminathan K, Klerman EB, Phillips AJK.

J Biol Rhythms. 2017 Apr;32(2):165-176. doi: 10.1177/0748730417699310. Epub 2017 Apr 2.


Modeling Neurocognitive Decline and Recovery During Repeated Cycles of Extended Sleep and Chronic Sleep Deficiency.

St Hilaire MA, Rüger M, Fratelli F, Hull JT, Phillips AJ, Lockley SW.

Sleep. 2017 Jan 1;40(1). doi: 10.1093/sleep/zsw009.


Mating type genes in the genus Neofusicoccum: Mating strategies and usefulness in species delimitation.

Lopes A, Phillips AJ, Alves A.

Fungal Biol. 2017 Apr;121(4):394-404. doi: 10.1016/j.funbio.2016.08.011. Epub 2016 Sep 9.


Parasite vulnerability to climate change: an evidence-based functional trait approach.

Cizauskas CA, Carlson CJ, Burgio KR, Clements CF, Dougherty ER, Harris NC, Phillips AJ.

R Soc Open Sci. 2017 Jan 11;4(1):160535. doi: 10.1098/rsos.160535. eCollection 2017 Jan. Review.


Detecting Microbially Induced Calcite Precipitation in a Model Well-Bore Using Downhole Low-Field NMR.

Kirkland CM, Zanetti S, Grunewald E, Walsh DO, Codd SL, Phillips AJ.

Environ Sci Technol. 2017 Feb 7;51(3):1537-1543. doi: 10.1021/acs.est.6b04833. Epub 2017 Jan 9.


Statistics for Sleep and Biological Rhythms Research.

Klerman EB, Wang W, Phillips AJ, Bianchi MT.

J Biol Rhythms. 2017 Feb;32(1):18-25. doi: 10.1177/0748730416670051. Epub 2016 Oct 25.


Statistics for Sleep and Biological Rhythms Research.

Bianchi MT, Phillips AJ, Wang W, Klerman EB.

J Biol Rhythms. 2017 Feb;32(1):7-17. doi: 10.1177/0748730416670050. Epub 2016 Oct 25.


Prevalence, Abundance, and Intensity of Implanted Spermatophores in the Leech Haementeria officinalis (Glossiphoniidae: Hirudinida) from Guanajuato, Mexico.

Salas-Montiel R, Phillips AJ, Contreras-Mirón S, Oceguera-Figueroa A.

J Parasitol. 2017 Feb;103(1):47-51. doi: 10.1645/16-56. Epub 2016 Nov 9.


Efficient Routes to a Diverse Array of Amino Alcohol-Derived Chiral Fragments.

Haftchenary S, Nelson SD Jr, Furst L, Dandapani S, Ferrara SJ, Bošković ŽV, Figueroa Lazú S, Guerrero AM, Serrano JC, Crews DK, Brackeen C, Mowat J, Brumby T, Bauser M, Schreiber SL, Phillips AJ.

ACS Comb Sci. 2016 Sep 12;18(9):569-74. doi: 10.1021/acscombsci.6b00050. Epub 2016 Aug 12.


Morphology and Phylogeny of Neoscytalidium orchidacearum sp. nov. (Botryosphaeriaceae).

Huang SK, Tangthirasunun N, Phillips AJ, Dai DQ, Wanasinghe DN, Wen TC, Bahkali AH, Hyde KD, Kang JC.

Mycobiology. 2016 Jun;44(2):79-84. doi: 10.5941/MYCO.2016.44.2.79. Epub 2016 Jun 30.


A multiproxy approach to evaluate biocidal treatments on biodeteriorated majolica glazed tiles.

Coutinho ML, Miller AZ, Martin-Sanchez PM, Mirão J, Gomez-Bolea A, Machado-Moreira B, Cerqueira-Alves L, Jurado V, Saiz-Jimenez C, Lima A, Phillips AJ, Pina F, Macedo MF.

Environ Microbiol. 2016 Dec;18(12):4794-4816. doi: 10.1111/1462-2920.13380. Epub 2016 Jun 27.


Development of Chemical Probes for Investigation of Salt-Inducible Kinase Function in Vivo.

Sundberg TB, Liang Y, Wu H, Choi HG, Kim ND, Sim T, Johannessen L, Petrone A, Khor B, Graham DB, Latorre IJ, Phillips AJ, Schreiber SL, Perez J, Shamji AF, Gray NS, Xavier RJ.

ACS Chem Biol. 2016 Aug 19;11(8):2105-11. doi: 10.1021/acschembio.6b00217. Epub 2016 Jun 6.


Genomic and Secondary Metabolite Analyses of Streptomyces sp. 2AW Provide Insight into the Evolution of the Cycloheximide Pathway.

Stulberg ER, Lozano GL, Morin JB, Park H, Baraban EG, Mlot C, Heffelfinger C, Phillips GM, Rush JS, Phillips AJ, Broderick NA, Thomas MG, Stabb EV, Handelsman J.

Front Microbiol. 2016 May 3;7:573. doi: 10.3389/fmicb.2016.00573. eCollection 2016.


Prediction of Vigilant Attention and Cognitive Performance Using Self-Reported Alertness, Circadian Phase, Hours since Awakening, and Accumulated Sleep Loss.

Bermudez EB, Klerman EB, Czeisler CA, Cohen DA, Wyatt JK, Phillips AJ.

PLoS One. 2016 Mar 28;11(3):e0151770. doi: 10.1371/journal.pone.0151770. eCollection 2016.


Admission, management and outcomes of acute pancreatitis in intensive care.

Russell PS, Mittal A, Brown L, McArthur C, Phillips AJR, Petrov M, Windsor JA.

ANZ J Surg. 2017 Dec;87(12):E266-E270. doi: 10.1111/ans.13498. Epub 2016 Mar 28.


Enhancing Education Activities for Health Care Trainees and Professionals Using Audience Response Systems: A Systematic Review.

Grzeskowiak LE, Thomas AE, To J, Phillips AJ, Reeve E.

J Contin Educ Health Prof. 2015 Fall;35(4):261-9. doi: 10.1097/01.CEH.0000473130.55806.87. Review.


Fracture Sealing with Microbially-Induced Calcium Carbonate Precipitation: A Field Study.

Phillips AJ, Cunningham AB, Gerlach R, Hiebert R, Hwang C, Lomans BP, Westrich J, Mantilla C, Kirksey J, Esposito R, Spangler L.

Environ Sci Technol. 2016 Apr 5;50(7):4111-7. doi: 10.1021/acs.est.5b05559. Epub 2016 Mar 17.


Volta phase plate cryo-EM of the small protein complex Prx3.

Khoshouei M, Radjainia M, Phillips AJ, Gerrard JA, Mitra AK, Plitzko JM, Baumeister W, Danev R.

Nat Commun. 2016 Jan 28;7:10534. doi: 10.1038/ncomms10534.


Austrobdella cairae n. sp., an Oioxenous Marine Leech (Clitellata: Piscicolidae) from the Banded Guitarfish, Zapteryx exasperata, in the Northeastern Pacific Ocean.

Curran SS, Phillips AJ, Overstreet RM, Benz GW, Henningsen AD.

J Parasitol. 2016 Apr;102(2):179-86. doi: 10.1645/15-829. Epub 2016 Jan 22.


Prediction of Happy-Sad mood from daily behaviors and previous sleep history.

Sano A, Yu AZ, McHill AW, Phillips AJ, Taylor S, Jaques N, Klerman EB, Picard RW.

Conf Proc IEEE Eng Med Biol Soc. 2015;2015:6796-9. doi: 10.1109/EMBC.2015.7319954.


Recommended names for pleomorphic genera in Dothideomycetes.

Rossman AY, Crous PW, Hyde KD, Hawksworth DL, Aptroot A, Bezerra JL, Bhat JD, Boehm E, Braun U, Boonmee S, Camporesi E, Chomnunti P, Dai DQ, D'souza MJ, Dissanayake A, Gareth Jones EB, Groenewald JZ, Hernández-Restrepo M, Hongsanan S, Jaklitsch WM, Jayawardena R, Jing LW, Kirk PM, Lawrey JD, Mapook A, McKenzie EH, Monkai J, Phillips AJ, Phookamsak R, Raja HA, Seifert KA, Senanayake I, Slippers B, Suetrong S, Taylor JE, Thambugala KM, Tian Q, Tibpromma S, Wanasinghe DN, Wijayawardene NN, Wikee S, Woudenberg JH, Wu HX, Yan J, Yang T, Zhang Y.

IMA Fungus. 2015 Dec;6(2):507-23. doi: 10.5598/imafungus.2015.06.02.14. Epub 2015 Dec 2.


Pyrrolocin A, a 3-Decalinoyltetramic Acid with Selective Biological Activity, Isolated from Amazonian Cultures of the Novel Endophyte Diaporthales sp. E6927E.

Patridge EV, Darnell A, Kucera K, Phillips GM, Bokesch HR, Gustafson KR, Spakowicz DJ, Zhou L, Hungerford WM, Plummer M, Hoyer D, Narváez-Trujillo A, Phillips AJ, Strobel SA.

Nat Prod Commun. 2015 Oct;10(10):1649-54.


Polysialylation controls dendritic cell trafficking by regulating chemokine recognition.

Kiermaier E, Moussion C, Veldkamp CT, Gerardy-Schahn R, de Vries I, Williams LG, Chaffee GR, Phillips AJ, Freiberger F, Imre R, Taleski D, Payne RJ, Braun A, Förster R, Mechtler K, Mühlenhoff M, Volkman BF, Sixt M.

Science. 2016 Jan 8;351(6269):186-90. doi: 10.1126/science.aad0512. Epub 2015 Dec 10.


Hypoplastic Metatarsals--Beyond Cosmesis.

Sharma A, Phillips AJ, Jüppner H.

N Engl J Med. 2015 Nov 26;373(22):2189-90. doi: 10.1056/NEJMc1508520. No abstract available.


Solution Structure of CCL19 and Identification of Overlapping CCR7 and PSGL-1 Binding Sites.

Veldkamp CT, Kiermaier E, Gabel-Eissens SJ, Gillitzer ML, Lippner DR, DiSilvio FA, Mueller CJ, Wantuch PL, Chaffee GR, Famiglietti MW, Zgoba DM, Bailey AA, Bah Y, Engebretson SJ, Graupner DR, Lackner ER, LaRosa VD, Medeiros T, Olson ML, Phillips AJ, Pyles H, Richard AM, Schoeller SJ, Touzeau B, Williams LG, Sixt M, Peterson FC.

Biochemistry. 2015 Jul 14;54(27):4163-6. doi: 10.1021/acs.biochem.5b00560. Epub 2015 Jul 6.


Recognizing Academic Performance, Sleep Quality, Stress Level, and Mental Health using Personality Traits, Wearable Sensors and Mobile Phones.

Sano A, Phillips AJ, Yu AZ, McHill AW, Taylor S, Jaques N, Czeisler CA, Klerman EB, Picard RW.

Int Conf Wearable Implant Body Sens Netw. 2015 Jun;2015. doi: 10.1109/BSN.2015.7299420. Epub 2015 Oct 19.


Evaluation of culture-based techniques and 454 pyrosequencing for the analysis of fungal diversity in potting media and organic fertilizers.

Al-Sadi AM, Al-Mazroui SS, Phillips AJ.

J Appl Microbiol. 2015 Aug;119(2):500-9. doi: 10.1111/jam.12854. Epub 2015 Jun 25.


Cryo-electron microscopy structure of human peroxiredoxin-3 filament reveals the assembly of a putative chaperone.

Radjainia M, Venugopal H, Desfosses A, Phillips AJ, Yewdall NA, Hampton MB, Gerrard JA, Mitra AK.

Structure. 2015 May 5;23(5):912-920. doi: 10.1016/j.str.2015.03.019. Epub 2015 Apr 23.


Enhancing continuing education activities using audience response systems: a single-blind controlled trial.

Grzeskowiak LE, Thomas AE, To J, Reeve E, Phillips AJ.

J Contin Educ Health Prof. 2015 Winter;35(1):38-45. doi: 10.1002/chp.21269.


An innovative approach to enhancing continuing education activities for practising pharmacists using clicker technology.

Grzeskowiak LE, To J, Thomas AE, Phillips AJ.

Int J Pharm Pract. 2014 Dec;22(6):437-9.


Plastic responses of native plant root systems to the presence of an invasive annual grass.

Phillips AJ, Leger EA.

Am J Bot. 2015 Jan;102(1):73-84. doi: 10.3732/ajb.1400234. Epub 2014 Dec 30.


Two new and two redescribed species of Anonchotaenia (Cestoda: Paruterinidae) from South American birds.

Phillips AJ, Georgiev BB, Waeschenbach A, Mariaux J.

Folia Parasitol (Praha). 2014 Oct;61(5):441-61.


Description of a new leech species of Helobdella (Clitellata: Glossiphoniidae) from Mexico with a review of Mexican congeners and a taxonomic key.

Salas-Montiel R, Phillips AJ, De Leon GP, Oceguera-Figueroa A.

Zootaxa. 2014 Dec 19;3900(1):77-94. doi: 10.11646/zootaxa.3900.1.4.


Naming and outline of Dothideomycetes-2014 including proposals for the protection or suppression of generic names.

Wijayawardene NN, Crous PW, Kirk PM, Hawksworth DL, Boonmee S, Braun U, Dai DQ, D'souza MJ, Diederich P, Dissanayake A, Doilom M, Hongsanan S, Jones EB, Groenewald JZ, Jayawardena R, Lawrey JD, Liu JK, Lücking R, Madrid H, Manamgoda DS, Muggia L, Nelsen MP, Phookamsak R, Suetrong S, Tanaka K, Thambugala KM, Wanasinghe DN, Wikee S, Zhang Y, Aptroot A, Ariyawansa HA, Bahkali AH, Bhat DJ, Gueidan C, Chomnunti P, De Hoog GS, Knudsen K, Li WJ, McKenzie EH, Miller AN, Phillips AJ, Piątek M, Raja HA, Shivas RS, Slippers B, Taylor JE, Tian Q, Wang Y, Woudenberg JH, Cai L, Jaklitsch WM, Hyde KD.

Fungal Divers. 2014 Nov;69(1):1-55. Epub 2014 Nov 4.


The solution structure of the forkhead box-O DNA binding domain of Brugia malayi DAF-16a.

Casper SK, Schoeller SJ, Zgoba DM, Phillips AJ, Morien TJ, Chaffee GR, Sackett PC, Peterson FC, Crossgrove K, Veldkamp CT.

Proteins. 2014 Dec;82(12):3490-6. doi: 10.1002/prot.24701. Epub 2014 Oct 21.


A phylogenetic study of Dothiorella and Spencermartinsia species associated with woody plants in Iran, New Zealand, Portugal and Spain.

Abdollahzadeh J, Javadi A, Zare R, Phillips AJ.

Persoonia. 2014 Jun;32:1-12. doi: 10.3767/003158514X678606. Epub 2014 Jan 14.


Transfer of the US-National Parasite Collection.

Hoberg EP, Phillips AJ.

Folia Parasitol (Praha). 2014 Aug;61(4):370. No abstract available.


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