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Items: 27

1.

MicroRNA-196 Regulates HOX Gene Expression in Human Gluteal Adipose Tissue.

Divoux A, Xie H, Li JL, Karastergiou K, Perera RJ, Chang RJ, Fried SK, Smith SR.

Obesity (Silver Spring). 2017 Aug;25(8):1375-1383. doi: 10.1002/oby.21896. Epub 2017 Jun 25.

2.

The long noncoding RNA SPRIGHTLY acts as an intranuclear organizing hub for pre-mRNA molecules.

Lee B, Sahoo A, Marchica J, Holzhauser E, Chen X, Li JL, Seki T, Govindarajan SS, Markey FB, Batish M, Lokhande SJ, Zhang S, Ray A, Perera RJ.

Sci Adv. 2017 May 3;3(5):e1602505. doi: 10.1126/sciadv.1602505. eCollection 2017 May.

3.

MicroRNA-211 Regulates Oxidative Phosphorylation and Energy Metabolism in Human Vitiligo.

Sahoo A, Lee B, Boniface K, Seneschal J, Sahoo SK, Seki T, Wang C, Das S, Han X, Steppie M, Seal S, Taieb A, Perera RJ.

J Invest Dermatol. 2017 Sep;137(9):1965-1974. doi: 10.1016/j.jid.2017.04.025. Epub 2017 May 11.

PMID:
28502800
4.

The Long Noncoding RNA SPRIGHTLY Regulates Cell Proliferation in Primary Human Melanocytes.

Zhao W, Mazar J, Lee B, Sawada J, Li JL, Shelley J, Govindarajan S, Towler D, Mattick JS, Komatsu M, Dinger ME, Perera RJ.

J Invest Dermatol. 2016 Apr;136(4):819-28. doi: 10.1016/j.jid.2016.01.018. Epub 2016 Jan 29.

5.

MicroRNA 211 Functions as a Metabolic Switch in Human Melanoma Cells.

Mazar J, Qi F, Lee B, Marchica J, Govindarajan S, Shelley J, Li JL, Ray A, Perera RJ.

Mol Cell Biol. 2016 Jan 19;36(7):1090-108. doi: 10.1128/MCB.00762-15.

6.

Clinical prospects of long noncoding RNAs as novel biomarkers and therapeutic targets in prostate cancer.

Mouraviev V, Lee B, Patel V, Albala D, Johansen TE, Partin A, Ross A, Perera RJ.

Prostate Cancer Prostatic Dis. 2016 Mar;19(1):14-20. doi: 10.1038/pcan.2015.48. Epub 2015 Oct 27. Review.

PMID:
26503110
7.

The functional characterization of long noncoding RNA SPRY4-IT1 in human melanoma cells.

Mazar J, Zhao W, Khalil AM, Lee B, Shelley J, Govindarajan SS, Yamamoto F, Ratnam M, Aftab MN, Collins S, Finck BN, Han X, Mattick JS, Dinger ME, Perera RJ.

Oncotarget. 2014 Oct 15;5(19):8959-69.

8.

Long noncoding RNAs as putative biomarkers for prostate cancer detection.

Lee B, Mazar J, Aftab MN, Qi F, Shelley J, Li JL, Govindarajan S, Valerio F, Rivera I, Thurn T, Tran TA, Kameh D, Patel V, Perera RJ.

J Mol Diagn. 2014 Nov;16(6):615-26.

9.

The role of microRNAs and long non-coding RNAs in the pathology, diagnosis, and management of melanoma.

Aftab MN, Dinger ME, Perera RJ.

Arch Biochem Biophys. 2014 Dec 1;563:60-70. doi: 10.1016/j.abb.2014.07.022. Epub 2014 Jul 24. Review.

10.

Identification of a novel lncRNA in gluteal adipose tissue and evidence for its positive effect on preadipocyte differentiation.

Divoux A, Karastergiou K, Xie H, Guo W, Perera RJ, Fried SK, Smith SR.

Obesity (Silver Spring). 2014 Aug;22(8):1781-5. doi: 10.1002/oby.20793. Epub 2014 May 23.

11.

Genome-wide methylated CpG island profiles of melanoma cells reveal a melanoma coregulation network.

Li JL, Mazar J, Zhong C, Faulkner GJ, Govindarajan SS, Zhang Z, Dinger ME, Meredith G, Adams C, Zhang S, Mattick JS, Ray A, Perera RJ.

Sci Rep. 2013 Oct 16;3:2962. doi: 10.1038/srep02962.

12.

Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs.

Moran VA, Perera RJ, Khalil AM.

Nucleic Acids Res. 2012 Aug;40(14):6391-400. doi: 10.1093/nar/gks296. Epub 2012 Apr 5. Review.

13.

Epigenetic regulation of miRNA genes and their role in human melanomas.

Perera RJ, Ray A.

Epigenomics. 2012 Feb;4(1):81-90. doi: 10.2217/epi.11.114. Review.

PMID:
22332660
14.

Epigenetic regulation of microRNA genes and the role of miR-34b in cell invasion and motility in human melanoma.

Mazar J, Khaitan D, DeBlasio D, Zhong C, Govindarajan SS, Kopanathi S, Zhang S, Ray A, Perera RJ.

PLoS One. 2011;6(9):e24922. doi: 10.1371/journal.pone.0024922. Epub 2011 Sep 19.

15.

Epigenetic regulation of microRNA-375 and its role in melanoma development in humans.

Mazar J, DeBlasio D, Govindarajan SS, Zhang S, Perera RJ.

FEBS Lett. 2011 Aug 4;585(15):2467-76. doi: 10.1016/j.febslet.2011.06.025. Epub 2011 Jun 26.

16.

The melanoma-upregulated long noncoding RNA SPRY4-IT1 modulates apoptosis and invasion.

Khaitan D, Dinger ME, Mazar J, Crawford J, Smith MA, Mattick JS, Perera RJ.

Cancer Res. 2011 Jun 1;71(11):3852-62. doi: 10.1158/0008-5472.CAN-10-4460. Epub 2011 May 10.

17.

The regulation of miRNA-211 expression and its role in melanoma cell invasiveness.

Mazar J, DeYoung K, Khaitan D, Meister E, Almodovar A, Goydos J, Ray A, Perera RJ.

PLoS One. 2010 Nov 1;5(11):e13779. doi: 10.1371/journal.pone.0013779.

18.

Protein-coding and non-coding gene expression analysis in differentiating human keratinocytes using a three-dimensional epidermal equivalent.

Mazar J, Sinha S, Dinger ME, Mattick JS, Perera RJ.

Mol Genet Genomics. 2010 Jul;284(1):1-9. doi: 10.1007/s00438-010-0543-6. Epub 2010 May 25.

PMID:
20499100
19.

A microarray-based method to profile global microRNA expression in human and mouse.

Perera RJ.

Methods Mol Biol. 2007;382:137-48. doi: 10.1007/978-1-59745-304-2_9.

PMID:
18220229
20.

MicroRNA-134 modulates the differentiation of mouse embryonic stem cells, where it causes post-transcriptional attenuation of Nanog and LRH1.

Tay YM, Tam WL, Ang YS, Gaughwin PM, Yang H, Wang W, Liu R, George J, Ng HH, Perera RJ, Lufkin T, Rigoutsos I, Thomson AM, Lim B.

Stem Cells. 2008 Jan;26(1):17-29. Epub 2007 Oct 4.

21.

MicroRNAs in the search for understanding human diseases.

Perera RJ, Ray A.

BioDrugs. 2007;21(2):97-104. Review.

PMID:
17402793
22.

Defining the transcriptome of accelerated and replicatively senescent keratinocytes reveals links to differentiation, interferon signaling, and Notch related pathways.

Perera RJ, Koo S, Bennett CF, Dean NM, Gupta N, Qin JZ, Nickoloff BJ.

J Cell Biochem. 2006 May 15;98(2):394-408.

PMID:
16440318
23.

Identification of novel PPARgamma target genes in primary human adipocytes.

Perera RJ, Marcusson EG, Koo S, Kang X, Kim Y, White N, Dean NM.

Gene. 2006 Mar 15;369:90-9. Epub 2005 Dec 27.

PMID:
16380219
24.

An apolipoprotein B antisense oligonucleotide lowers LDL cholesterol in hyperlipidemic mice without causing hepatic steatosis.

Crooke RM, Graham MJ, Lemonidis KM, Whipple CP, Koo S, Perera RJ.

J Lipid Res. 2005 May;46(5):872-84. Epub 2005 Feb 16.

25.

Development of a micro-array to detect human and mouse microRNAs and characterization of expression in human organs.

Sun Y, Koo S, White N, Peralta E, Esau C, Dean NM, Perera RJ.

Nucleic Acids Res. 2004 Dec 22;32(22):e188.

26.

MicroRNA-143 regulates adipocyte differentiation.

Esau C, Kang X, Peralta E, Hanson E, Marcusson EG, Ravichandran LV, Sun Y, Koo S, Perera RJ, Jain R, Dean NM, Freier SM, Bennett CF, Lollo B, Griffey R.

J Biol Chem. 2004 Dec 10;279(50):52361-5. Epub 2004 Oct 25.

27.

Cytosine deaminase as a negative selective marker for Arabidopsis.

Perera RJ, Linard CG, Signer ER.

Plant Mol Biol. 1993 Nov;23(4):793-9. Erratum in: Plant Mol Biol 1994 Mar;24(5):832.

PMID:
8251632

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