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Items: 1 to 50 of 58

1.

Transcending data gaps: a framework to reduce inferential errors in ecological analyses.

Kim SW, Blomberg SP, Pandolfi JM.

Ecol Lett. 2018 May 25. doi: 10.1111/ele.13089. [Epub ahead of print]

PMID:
29797760
2.

Climate Velocity Can Inform Conservation in a Warming World.

Brito-Morales I, García Molinos J, Schoeman DS, Burrows MT, Poloczanska ES, Brown CJ, Ferrier S, Harwood TD, Klein CJ, McDonald-Madden E, Moore PJ, Pandolfi JM, Watson JEM, Wenger AS, Richardson AJ.

Trends Ecol Evol. 2018 Jun;33(6):441-457. doi: 10.1016/j.tree.2018.03.009. Epub 2018 Apr 30. Review.

PMID:
29716742
3.

Spatial and temporal patterns of mass bleaching of corals in the Anthropocene.

Hughes TP, Anderson KD, Connolly SR, Heron SF, Kerry JT, Lough JM, Baird AH, Baum JK, Berumen ML, Bridge TC, Claar DC, Eakin CM, Gilmour JP, Graham NAJ, Harrison H, Hobbs JA, Hoey AS, Hoogenboom M, Lowe RJ, McCulloch MT, Pandolfi JM, Pratchett M, Schoepf V, Torda G, Wilson SK.

Science. 2018 Jan 5;359(6371):80-83. doi: 10.1126/science.aan8048.

PMID:
29302011
4.

Corrigendum: The Coral Trait Database, a curated database of trait information for coral species from the global oceans.

Madin JS, Anderson KD, Andreasen MH, Bridge TCL, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Harmer AMT, Hoogenboom MO, Huang D, Keith SA, Kosnik MA, Kuo CY, Lough JM, Lovelock CE, Luiz O, Martinelli J, Mizerek T, Pandolfi JM, Pochon X, Pratchett MS, Putnam HM, Roberts TE, Stat M, Wallace CC, Widman E, Baird AH.

Sci Data. 2017 Dec 5;4:170174. doi: 10.1038/sdata.2017.174.

5.

Ghost reefs: Nautical charts document large spatial scale of coral reef loss over 240 years.

McClenachan L, O'Connor G, Neal BP, Pandolfi JM, Jackson JBC.

Sci Adv. 2017 Sep 6;3(9):e1603155. doi: 10.1126/sciadv.1603155. eCollection 2017 Sep.

6.

U-Th dating reveals regional-scale decline of branching Acropora corals on the Great Barrier Reef over the past century.

Clark TR, Roff G, Zhao JX, Feng YX, Done TJ, McCook LJ, Pandolfi JM.

Proc Natl Acad Sci U S A. 2017 Sep 26;114(39):10350-10355. doi: 10.1073/pnas.1705351114. Epub 2017 Sep 11.

7.

Towards a new paleotemperature proxy from reef coral occurrences.

Lauchstedt A, Pandolfi JM, Kiessling W.

Sci Rep. 2017 Sep 5;7(1):10461. doi: 10.1038/s41598-017-10961-3.

8.

Local and regional controls of phylogenetic structure at the high-latitude range limits of corals.

Sommer B, Sampayo EM, Beger M, Harrison PL, Babcock RC, Pandolfi JM.

Proc Biol Sci. 2017 Aug 30;284(1861). pii: 20170915. doi: 10.1098/rspb.2017.0915.

PMID:
28835555
9.

Popular media records reveal multi-decadal trends in recreational fishing catch rates.

Thurstan RH, Game E, Pandolfi JM.

PLoS One. 2017 Aug 4;12(8):e0182345. doi: 10.1371/journal.pone.0182345. eCollection 2017.

10.

Managing consequences of climate-driven species redistribution requires integration of ecology, conservation and social science.

Bonebrake TC, Brown CJ, Bell JD, Blanchard JL, Chauvenet A, Champion C, Chen IC, Clark TD, Colwell RK, Danielsen F, Dell AI, Donelson JM, Evengård B, Ferrier S, Frusher S, Garcia RA, Griffis RB, Hobday AJ, Jarzyna MA, Lee E, Lenoir J, Linnetved H, Martin VY, McCormack PC, McDonald J, McDonald-Madden E, Mitchell N, Mustonen T, Pandolfi JM, Pettorelli N, Possingham H, Pulsifer P, Reynolds M, Scheffers BR, Sorte CJB, Strugnell JM, Tuanmu MN, Twiname S, Vergés A, Villanueva C, Wapstra E, Wernberg T, Pecl GT.

Biol Rev Camb Philos Soc. 2018 Feb;93(1):284-305. doi: 10.1111/brv.12344. Epub 2017 Jun 1.

PMID:
28568902
11.

Historical spatial reconstruction of a spawning-aggregation fishery.

Buckley SM, Thurstan RH, Tobin A, Pandolfi JM.

Conserv Biol. 2017 Dec;31(6):1322-1332. doi: 10.1111/cobi.12940. Epub 2017 Aug 10.

PMID:
28370319
12.

Biodiversity redistribution under climate change: Impacts on ecosystems and human well-being.

Pecl GT, Araújo MB, Bell JD, Blanchard J, Bonebrake TC, Chen IC, Clark TD, Colwell RK, Danielsen F, Evengård B, Falconi L, Ferrier S, Frusher S, Garcia RA, Griffis RB, Hobday AJ, Janion-Scheepers C, Jarzyna MA, Jennings S, Lenoir J, Linnetved HI, Martin VY, McCormack PC, McDonald J, Mitchell NJ, Mustonen T, Pandolfi JM, Pettorelli N, Popova E, Robinson SA, Scheffers BR, Shaw JD, Sorte CJ, Strugnell JM, Sunday JM, Tuanmu MN, Vergés A, Villanueva C, Wernberg T, Wapstra E, Williams SE.

Science. 2017 Mar 31;355(6332). pii: eaai9214. doi: 10.1126/science.aai9214. Review.

PMID:
28360268
13.

Symbiosis and microbiome flexibility in calcifying benthic foraminifera of the Great Barrier Reef.

Prazeres M, Ainsworth T, Roberts TE, Pandolfi JM, Leggat W.

Microbiome. 2017 Mar 23;5(1):38. doi: 10.1186/s40168-017-0257-7.

14.

Variation in sensitivity of large benthic Foraminifera to the combined effects of ocean warming and local impacts.

Prazeres M, Roberts TE, Pandolfi JM.

Sci Rep. 2017 Mar 23;7:45227. doi: 10.1038/srep45227.

15.

Global warming and recurrent mass bleaching of corals.

Hughes TP, Kerry JT, Álvarez-Noriega M, Álvarez-Romero JG, Anderson KD, Baird AH, Babcock RC, Beger M, Bellwood DR, Berkelmans R, Bridge TC, Butler IR, Byrne M, Cantin NE, Comeau S, Connolly SR, Cumming GS, Dalton SJ, Diaz-Pulido G, Eakin CM, Figueira WF, Gilmour JP, Harrison HB, Heron SF, Hoey AS, Hobbs JA, Hoogenboom MO, Kennedy EV, Kuo CY, Lough JM, Lowe RJ, Liu G, McCulloch MT, Malcolm HA, McWilliam MJ, Pandolfi JM, Pears RJ, Pratchett MS, Schoepf V, Simpson T, Skirving WJ, Sommer B, Torda G, Wachenfeld DR, Willis BL, Wilson SK.

Nature. 2017 Mar 15;543(7645):373-377. doi: 10.1038/nature21707.

PMID:
28300113
16.

Empty Niches after Extinctions Increase Population Sizes of Modern Corals.

Prada C, Hanna B, Budd AF, Woodley CM, Schmutz J, Grimwood J, Iglesias-Prieto R, Pandolfi JM, Levitan D, Johnson KG, Knowlton N, Kitano H, DeGiorgio M, Medina M.

Curr Biol. 2016 Dec 5;26(23):3190-3194. doi: 10.1016/j.cub.2016.09.039. Epub 2016 Nov 17.

17.

The broad footprint of climate change from genes to biomes to people.

Scheffers BR, De Meester L, Bridge TC, Hoffmann AA, Pandolfi JM, Corlett RT, Butchart SH, Pearce-Kelly P, Kovacs KM, Dudgeon D, Pacifici M, Rondinini C, Foden WB, Martin TG, Mora C, Bickford D, Watson JE.

Science. 2016 Nov 11;354(6313). pii: aaf7671. Review.

PMID:
27846577
18.

Effects of Elevated Temperature on the Shell Density of the Large Benthic Foraminifera Amphistegina lobifera.

Prazeres M, Pandolfi JM.

J Eukaryot Microbiol. 2016 Nov;63(6):786-793. doi: 10.1111/jeu.12325. Epub 2016 Jun 2.

PMID:
27174711
19.

Are coral reefs victims of their own past success?

Renema W, Pandolfi JM, Kiessling W, Bosellini FR, Klaus JS, Korpanty C, Rosen BR, Santodomingo N, Wallace CC, Webster JM, Johnson KG.

Sci Adv. 2016 Apr 22;2(4):e1500850. doi: 10.1126/sciadv.1500850. eCollection 2016 Apr.

20.

The Coral Trait Database, a curated database of trait information for coral species from the global oceans.

Madin JS, Anderson KD, Andreasen MH, Bridge TC, Cairns SD, Connolly SR, Darling ES, Diaz M, Falster DS, Franklin EC, Gates RD, Harmer A, Hoogenboom MO, Huang D, Keith SA, Kosnik MA, Kuo CY, Lough JM, Lovelock CE, Luiz O, Martinelli J, Mizerek T, Pandolfi JM, Pochon X, Pratchett MS, Putnam HM, Roberts TE, Stat M, Wallace CC, Widman E, Baird AH.

Sci Data. 2016 Mar 29;3:160017. doi: 10.1038/sdata.2016.17. Erratum in: Sci Data. 2017 Dec 05;4:170174. Harmer, Aaron [added].

21.

A Trait-Based Approach to Advance Coral Reef Science.

Madin JS, Hoogenboom MO, Connolly SR, Darling ES, Falster DS, Huang D, Keith SA, Mizerek T, Pandolfi JM, Putnam HM, Baird AH.

Trends Ecol Evol. 2016 Jun;31(6):419-428. doi: 10.1016/j.tree.2016.02.012. Epub 2016 Mar 8. Review.

PMID:
26969335
22.

Influence of local habitat on the physiological responses of large benthic foraminifera to temperature and nutrient stress.

Prazeres M, Uthicke S, Pandolfi JM.

Sci Rep. 2016 Feb 23;6:21936. doi: 10.1038/srep21936.

23.

Historical photographs revisited: A case study for dating and characterizing recent loss of coral cover on the inshore Great Barrier Reef.

Clark TR, Leonard ND, Zhao JX, Brodie J, McCook LJ, Wachenfeld DR, Duc Nguyen A, Markham HL, Pandolfi JM.

Sci Rep. 2016 Jan 27;6:19285. doi: 10.1038/srep19285.

24.

Ecological and methodological drivers of species' distribution and phenology responses to climate change.

Brown CJ, O'Connor MI, Poloczanska ES, Schoeman DS, Buckley LB, Burrows MT, Duarte CM, Halpern BS, Pandolfi JM, Parmesan C, Richardson AJ.

Glob Chang Biol. 2016 Apr;22(4):1548-60. doi: 10.1111/gcb.13184. Epub 2016 Feb 9.

25.

Marine extinction risk shaped by trait-environment interactions over 500 million years.

Orzechowski EA, Lockwood R, Byrnes JE, Anderson SC, Finnegan S, Finkel ZV, Harnik PG, Lindberg DR, Liow LH, Lotze HK, McClain CR, McGuire JL, O'Dea A, Pandolfi JM, Simpson C, Tittensor DP.

Glob Chang Biol. 2015 Oct;21(10):3595-607. doi: 10.1111/gcb.12963. Epub 2015 Jul 18.

PMID:
26190141
26.

The cumulative impacts of repeated heavy rainfall, flooding and altered water quality on the high-latitude coral reefs of Hervey Bay, Queensland, Australia.

Butler IR, Sommer B, Zann M, Zhao JX, Pandolfi JM.

Mar Pollut Bull. 2015 Jul 15;96(1-2):356-67. doi: 10.1016/j.marpolbul.2015.04.047. Epub 2015 Apr 29.

PMID:
25935807
27.

Extinctions. Paleontological baselines for evaluating extinction risk in the modern oceans.

Finnegan S, Anderson SC, Harnik PG, Simpson C, Tittensor DP, Byrnes JE, Finkel ZV, Lindberg DR, Liow LH, Lockwood R, Lotze HK, McClain CR, McGuire JL, O'Dea A, Pandolfi JM.

Science. 2015 May 1;348(6234):567-70. doi: 10.1126/science.aaa6635.

28.

Ocean acidification induces biochemical and morphological changes in the calcification process of large benthic foraminifera.

Prazeres M, Uthicke S, Pandolfi JM.

Proc Biol Sci. 2015 Mar 22;282(1803):20142782. doi: 10.1098/rspb.2014.2782.

29.

Ecology: Deep and complex ways to survive bleaching.

Pandolfi JM.

Nature. 2015 Feb 5;518(7537):43-4. doi: 10.1038/nature14196. Epub 2015 Jan 14. No abstract available.

PMID:
25652993
30.

Symbiodinium identity alters the temperature-dependent settlement behaviour of Acropora millepora coral larvae before the onset of symbiosis.

Winkler NS, Pandolfi JM, Sampayo EM.

Proc Biol Sci. 2015 Feb 22;282(1801):20142260. doi: 10.1098/rspb.2014.2260.

31.

Trait-mediated environmental filtering drives assembly at biogeographic transition zones.

Sommer B, Harrison PL, Beger M, Pandolfi JM.

Ecology. 2014 Apr;95(4):1000-9.

PMID:
24933818
32.

Ecology. Novelty trumps loss in global biodiversity.

Pandolfi JM, Lovelock CE.

Science. 2014 Apr 18;344(6181):266-7. doi: 10.1126/science.1252963. No abstract available.

PMID:
24744366
33.

Geographical limits to species-range shifts are suggested by climate velocity.

Burrows MT, Schoeman DS, Richardson AJ, Molinos JG, Hoffmann A, Buckley LB, Moore PJ, Brown CJ, Bruno JF, Duarte CM, Halpern BS, Hoegh-Guldberg O, Kappel CV, Kiessling W, O'Connor MI, Pandolfi JM, Parmesan C, Sydeman WJ, Ferrier S, Williams KJ, Poloczanska ES.

Nature. 2014 Mar 27;507(7493):492-5. doi: 10.1038/nature12976. Epub 2014 Feb 9.

PMID:
24509712
34.

Coral luminescence identifies the Pacific Decadal Oscillation as a primary driver of river runoff variability impacting the southern Great Barrier Reef.

Rodriguez-Ramirez A, Grove CA, Zinke J, Pandolfi JM, Zhao JX.

PLoS One. 2014 Jan 8;9(1):e84305. doi: 10.1371/journal.pone.0084305. eCollection 2014.

35.

Predicting evolutionary responses to climate change in the sea.

Munday PL, Warner RR, Monro K, Pandolfi JM, Marshall DJ.

Ecol Lett. 2013 Dec;16(12):1488-500. doi: 10.1111/ele.12185. Epub 2013 Oct 1. Review.

PMID:
24119205
36.

Decline in growth of foraminifer Marginopora rossi under eutrophication and ocean acidification scenarios.

Reymond CE, Lloyd A, Kline DI, Dove SG, Pandolfi JM.

Glob Chang Biol. 2013 Jan;19(1):291-302. doi: 10.1111/gcb.12035. Epub 2012 Oct 29.

PMID:
23504740
37.

Equatorial decline of reef corals during the last Pleistocene interglacial.

Kiessling W, Simpson C, Beck B, Mewis H, Pandolfi JM.

Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21378-83. doi: 10.1073/pnas.1214037110. Epub 2012 Dec 10.

38.

Palaeoecological evidence of a historical collapse of corals at Pelorus Island, inshore Great Barrier Reef, following European settlement.

Roff G, Clark TR, Reymond CE, Zhao JX, Feng Y, McCook LJ, Done TJ, Pandolfi JM.

Proc Biol Sci. 2013 Jan 7;280(1750):20122100. doi: 10.1098/rspb.2012.2100. Epub 2012 Nov 7.

39.

Species differences drive nonneutral structure in pleistocene coral communities.

Bode M, Connolly SR, Pandolfi JM.

Am Nat. 2012 Nov;180(5):577-88. doi: 10.1086/667892. Epub 2012 Oct 4.

PMID:
23070319
40.

The effect of nutrient enrichment on the growth, nucleic acid concentrations, and elemental stoichiometry of coral reef macroalgae.

Reef R, Pandolfi JM, Lovelock CE.

Ecol Evol. 2012 Aug;2(8):1985-95. doi: 10.1002/ece3.330. Epub 2012 Jul 16.

41.

Extinctions in ancient and modern seas.

Harnik PG, Lotze HK, Anderson SC, Finkel ZV, Finnegan S, Lindberg DR, Liow LH, Lockwood R, McClain CR, McGuire JL, O'Dea A, Pandolfi JM, Simpson C, Tittensor DP.

Trends Ecol Evol. 2012 Nov;27(11):608-17. doi: 10.1016/j.tree.2012.07.010. Epub 2012 Aug 10. Review.

PMID:
22889500
42.

Climate change and marine life.

Richardson AJ, Brown CJ, Brander K, Bruno JF, Buckley L, Burrows MT, Duarte CM, Halpern BS, Hoegh-Guldberg O, Holding J, Kappel CV, Kiessling W, Moore PJ, O'Connor MI, Pandolfi JM, Parmesan C, Schoeman DS, Schwing F, Sydeman WJ, Poloczanska ES.

Biol Lett. 2012 Dec 23;8(6):907-9. doi: 10.1098/rsbl.2012.0530. Epub 2012 Jul 11.

43.

The pace of shifting climate in marine and terrestrial ecosystems.

Burrows MT, Schoeman DS, Buckley LB, Moore P, Poloczanska ES, Brander KM, Brown C, Bruno JF, Duarte CM, Halpern BS, Holding J, Kappel CV, Kiessling W, O'Connor MI, Pandolfi JM, Parmesan C, Schwing FB, Sydeman WJ, Richardson AJ.

Science. 2011 Nov 4;334(6056):652-5. doi: 10.1126/science.1210288.

44.

Historical reconstruction reveals recovery in Hawaiian coral reefs.

Kittinger JN, Pandolfi JM, Blodgett JH, Hunt TL, Jiang H, Maly K, McClenachan LE, Schultz JK, Wilcox BA.

PLoS One. 2011;6(10):e25460. doi: 10.1371/journal.pone.0025460. Epub 2011 Oct 3.

45.

Projecting coral reef futures under global warming and ocean acidification.

Pandolfi JM, Connolly SR, Marshall DJ, Cohen AL.

Science. 2011 Jul 22;333(6041):418-22. doi: 10.1126/science.1204794. Review.

PMID:
21778392
46.

Benthic foraminiferal assemblages from Moreton Bay, South-East Queensland, Australia: applications in monitoring water and substrate quality in subtropical estuarine environments.

Narayan YR, Pandolfi JM.

Mar Pollut Bull. 2010 Nov;60(11):2062-78. doi: 10.1016/j.marpolbul.2010.07.012. Epub 2010 Aug 8.

PMID:
20696442
47.

Evolutionary novelty is concentrated at the edge of coral species distributions.

Budd AF, Pandolfi JM.

Science. 2010 Jun 18;328(5985):1558-61. doi: 10.1126/science.1188947.

48.

Community dynamics of Pleistocene coral reefs during alternative climatic regimes.

Tager D, Webster JM, Potts DC, Renema W, Braga JC, Pandolfi JM.

Ecology. 2010 Jan;91(1):191-200.

PMID:
20380208
49.

Evolutionary impacts of fishing: overfishing's 'Darwinian debt'.

Pandolfi JM.

F1000 Biol Rep. 2009 Jun 9;1:43. doi: 10.3410/B1-43.

50.

Hopping hotspots: global shifts in marine biodiversity.

Renema W, Bellwood DR, Braga JC, Bromfield K, Hall R, Johnson KG, Lunt P, Meyer CP, McMonagle LB, Morley RJ, O'Dea A, Todd JA, Wesselingh FP, Wilson ME, Pandolfi JM.

Science. 2008 Aug 1;321(5889):654-7. doi: 10.1126/science.1155674. Review.

PMID:
18669854

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