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Items: 41

1.

Whole-genome sequencing of the blue whale and other rorquals finds signatures for introgressive gene flow.

Árnason Ú, Lammers F, Kumar V, Nilsson MA, Janke A.

Sci Adv. 2018 Apr 4;4(4):eaap9873. doi: 10.1126/sciadv.aap9873. eCollection 2018 Apr.

2.

Resolving kangaroo phylogeny and overcoming retrotransposon ascertainment bias.

Dodt WG, Gallus S, Phillips MJ, Nilsson MA.

Sci Rep. 2017 Dec 1;7(1):16811. doi: 10.1038/s41598-017-16148-0.

3.

Speciation Generates Mosaic Genomes in Kangaroos.

Nilsson MA, Zheng Y, Kumar V, Phillips MJ, Janke A.

Genome Biol Evol. 2018 Jan 1;10(1):33-44. doi: 10.1093/gbe/evx245.

4.

Composition of marsupial zona pellucida: a molecular and phylogenetic approach.

Moros-Nicolás C, Chevret P, Izquierdo-Rico MJ, Holt WV, Esteban-Díaz D, López-Béjar M, Martínez-Nevado E, Nilsson MA, Ballesta J, Avilés M.

Reprod Fertil Dev. 2017 Nov 22. doi: 10.1071/RD16519. [Epub ahead of print]

PMID:
29162213
5.

Phylogenetic Conflict in Bears Identified by Automated Discovery of Transposable Element Insertions in Low-Coverage Genomes.

Lammers F, Gallus S, Janke A, Nilsson MA.

Genome Biol Evol. 2017 Oct 1;9(10):2862-2878. doi: 10.1093/gbe/evx170.

6.

The evolutionary history of bears is characterized by gene flow across species.

Kumar V, Lammers F, Bidon T, Pfenninger M, Kolter L, Nilsson MA, Janke A.

Sci Rep. 2017 Apr 19;7:46487. doi: 10.1038/srep46487.

7.

Response to "How many species of giraffe are there?"

Fennessy J, Winter S, Reuss F, Kumar V, Nilsson MA, Vamberger M, Fritz U, Janke A.

Curr Biol. 2017 Feb 20;27(4):R137-R138. doi: 10.1016/j.cub.2016.12.045.

8.

Multi-locus Analyses Reveal Four Giraffe Species Instead of One.

Fennessy J, Bidon T, Reuss F, Kumar V, Elkan P, Nilsson MA, Vamberger M, Fritz U, Janke A.

Curr Biol. 2016 Sep 26;26(18):2543-2549. doi: 10.1016/j.cub.2016.07.036. Epub 2016 Sep 8.

9.

When Genomics Is Not Enough: Experimental Evidence for a Decrease in LINE-1 Activity During the Evolution of Australian Marsupials.

Gallus S, Lammers F, Nilsson MA.

Genome Biol Evol. 2016 Aug 25;8(8):2406-12. doi: 10.1093/gbe/evw159.

10.

The devil is in the details: Transposable element analysis of the Tasmanian devil genome.

Nilsson MA.

Mob Genet Elements. 2015 Dec 4;6(1):e1119926. eCollection 2016 Jan-Feb.

11.

Genetic signatures of adaptation revealed from transcriptome sequencing of Arctic and red foxes.

Kumar V, Kutschera VE, Nilsson MA, Janke A.

BMC Genomics. 2015 Aug 7;16:585. doi: 10.1186/s12864-015-1724-9.

12.

A genome survey sequencing of the Java mouse deer (Tragulus javanicus) adds new aspects to the evolution of lineage specific retrotransposons in Ruminantia (Cetartiodactyla).

Gallus S, Kumar V, Bertelsen MF, Janke A, Nilsson MA.

Gene. 2015 Oct 25;571(2):271-8. doi: 10.1016/j.gene.2015.06.064. Epub 2015 Jun 27.

PMID:
26123917
13.

Genome-Wide Search Identifies 1.9 Mb from the Polar Bear Y Chromosome for Evolutionary Analyses.

Bidon T, Schreck N, Hailer F, Nilsson MA, Janke A.

Genome Biol Evol. 2015 May 27;7(7):2010-22. doi: 10.1093/gbe/evv103.

14.

Disentangling the relationship of the Australian marsupial orders using retrotransposon and evolutionary network analyses.

Gallus S, Janke A, Kumar V, Nilsson MA.

Genome Biol Evol. 2015 Mar 18;7(4):985-92. doi: 10.1093/gbe/evv052.

15.

Evolutionary histories of transposable elements in the genome of the largest living marsupial carnivore, the Tasmanian devil.

Gallus S, Hallström BM, Kumar V, Dodt WG, Janke A, Schumann GG, Nilsson MA.

Mol Biol Evol. 2015 May;32(5):1268-83. doi: 10.1093/molbev/msv017. Epub 2015 Jan 28.

16.

Retroviral envelope gene captures and syncytin exaptation for placentation in marsupials.

Cornelis G, Vernochet C, Carradec Q, Souquere S, Mulot B, Catzeflis F, Nilsson MA, Menzies BR, Renfree MB, Pierron G, Zeller U, Heidmann O, Dupressoir A, Heidmann T.

Proc Natl Acad Sci U S A. 2015 Feb 3;112(5):E487-96. doi: 10.1073/pnas.1417000112. Epub 2015 Jan 20.

17.

The complete mitochondrial genome of the eastern grey kangaroo (Macropus giganteus).

Dodt WG, McComish BJ, Nilsson MA, Gibb GC, Penny D, Phillips MJ.

Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(2):1366-7. doi: 10.3109/19401736.2014.947583. Epub 2014 Aug 8.

PMID:
25103427
18.

Genomic resources and genetic diversity of captive lesser kudu (Tragelaphus imberbis).

Bock F, Gallus S, Janke A, Hailer F, Steck BL, Kumar V, Nilsson MA.

Zoo Biol. 2014 Sep-Oct;33(5):440-5. doi: 10.1002/zoo.21146. Epub 2014 Jul 14.

PMID:
25043251
19.

Activity of ancient RTE retroposons during the evolution of cows, spiral-horned antelopes, and Nilgais (Bovinae).

Nilsson MA, Klassert D, Bertelsen MF, Hallström BM, Janke A.

Mol Biol Evol. 2012 Oct;29(10):2885-8. Epub 2012 Jun 11.

PMID:
22688946
20.

Expansion of CORE-SINEs in the genome of the Tasmanian devil.

Nilsson MA, Janke A, Murchison EP, Ning Z, Hallström BM.

BMC Genomics. 2012 May 6;13:172. doi: 10.1186/1471-2164-13-172.

21.

The effect of contact angle hysteresis on droplet coalescence and mixing.

Nilsson MA, Rothstein JP.

J Colloid Interface Sci. 2011 Nov 15;363(2):646-54. doi: 10.1016/j.jcis.2011.07.086. Epub 2011 Aug 3.

PMID:
21855081
22.

Tracking marsupial evolution using archaic genomic retroposon insertions.

Nilsson MA, Churakov G, Sommer M, Tran NV, Zemann A, Brosius J, Schmitz J.

PLoS Biol. 2010 Jul 27;8(7):e1000436. doi: 10.1371/journal.pbio.1000436.

23.

The impact of fossil calibrations, codon positions and relaxed clocks on the divergence time estimates of the native Australian rodents (Conilurini).

Nilsson MA, Härlid A, Kullberg M, Janke A.

Gene. 2010 May 1;455(1-2):22-31. doi: 10.1016/j.gene.2010.02.002. Epub 2010 Feb 11.

PMID:
20153409
24.

The structure of the Australian and South American marsupial mitochondrial control region.

Nilsson MA.

Mitochondrial DNA. 2009 Dec;20(5-6):126-38. doi: 10.3109/19401730903180112.

PMID:
19900062
25.

Studies on the role of calcium phosphate in the process of calcium oxalate crystal formation.

Tiselius HG, Lindbäck B, Fornander AM, Nilsson MA.

Urol Res. 2009 Aug;37(4):181-92. doi: 10.1007/s00240-009-0191-7. Epub 2009 May 15.

PMID:
19444436
26.

Phylogenomic data analyses provide evidence that Xenarthra and Afrotheria are sister groups.

Hallström BM, Kullberg M, Nilsson MA, Janke A.

Mol Biol Evol. 2007 Sep;24(9):2059-68. Epub 2007 Jul 13.

PMID:
17630282
27.

Housekeeping genes for phylogenetic analysis of eutherian relationships.

Kullberg M, Nilsson MA, Arnason U, Harley EH, Janke A.

Mol Biol Evol. 2006 Aug;23(8):1493-503. Epub 2006 Jun 2.

PMID:
16751257
28.

Marsupial relationships and a timeline for marsupial radiation in South Gondwana.

Nilsson MA, Arnason U, Spencer PB, Janke A.

Gene. 2004 Oct 13;340(2):189-96.

PMID:
15475160
29.

Radiation of extant marsupials after the K/T boundary: evidence from complete mitochondrial genomes.

Nilsson MA, Gullberg A, Spotorno AE, Arnason U, Janke A.

J Mol Evol. 2003;57 Suppl 1:S3-12.

PMID:
15008398
31.
33.

Crystallization during volume reduction of solutions with an ion-composition corresponding to that in the distal tubuli.

Højgaard I, Fornander AM, Nilsson MA, Tiselius HG.

Scanning Microsc. 1996;10(2):487-97; discussion 497-8.

PMID:
9813626
34.

Is citrate an inhibitor of calcium oxalate crystal growth in high concentrations of urine?

Bek-Jensen H, Fornander AM, Nilsson MA, Tiselius HG.

Urol Res. 1996;24(2):67-71.

PMID:
8740974
35.

Crystallization properties in urine from calcium oxalate stone formers.

Tiselius HG, Bek-Jensen H, Fornander AM, Nilsson MA.

J Urol. 1995 Sep;154(3):940-6.

PMID:
7637098
36.

Effects of citrate on the different phases of calcium oxalate crystallization.

Tiselius HG, Berg C, Fornander AM, Nilsson MA.

Scanning Microsc. 1993 Mar;7(1):381-9; discussion 389-90. Review.

PMID:
8316807
37.

The effects of citrate and urine on calcium oxalate crystal aggregation.

Tiselius HG, Fornander AM, Nilsson MA.

Urol Res. 1993;21(5):363-6.

PMID:
8279094
38.

Effects of urinary macromolecules on the crystallization of calcium oxalate.

Tiselius HG, Fornander AM, Nilsson MA.

Urol Res. 1990;18(6):381-5.

PMID:
2100412
39.

A technical device for irradiation in carcinoma of the penis.

Franzén L, Henriksson R, Karlsson NO, Löfroth PO, Nilsson MA.

Acta Oncol. 1987 Jan-Feb;26(1):77-8. No abstract available.

PMID:
3593577
40.

Inhibition of calcium oxalate crystallization in urine.

Tiselius HG, Fornander AM, Nilsson MA.

Urol Res. 1987;15(2):83-6.

PMID:
3590434
41.

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