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Items: 44

1.

Evidence of sex-bias in gene expression in the brain transcriptome of two populations of rainbow trout (Oncorhynchus mykiss) with divergent life histories.

Hale MC, McKinney GJ, Thrower FP, Nichols KM.

PLoS One. 2018 Feb 15;13(2):e0193009. doi: 10.1371/journal.pone.0193009. eCollection 2018.

2.

Using Linkage Maps as a Tool To Determine Patterns of Chromosome Synteny in the Genus Salvelinus.

Hale MC, McKinney GJ, Bell CL, Nichols KM.

G3 (Bethesda). 2017 Nov 6;7(11):3821-3830. doi: 10.1534/g3.117.300317.

3.

Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture.

Macqueen DJ, Primmer CR, Houston RD, Nowak BF, Bernatchez L, Bergseth S, Davidson WS, Gallardo-Escárate C, Goldammer T, Guiguen Y, Iturra P, Kijas JW, Koop BF, Lien S, Maass A, Martin SAM, McGinnity P, Montecino M, Naish KA, Nichols KM, Ólafsson K, Omholt SW, Palti Y, Plastow GS, Rexroad CE Rd, Rise ML, Ritchie RJ, Sandve SR, Schulte PM, Tello A, Vidal R, Vik JO, Wargelius A, Yáñez JM; FAASG Consortium.

BMC Genomics. 2017 Jun 27;18(1):484. doi: 10.1186/s12864-017-3862-8.

4.

Analysis of Patient Visits and Collections After Opening a Satellite Pediatric Emergency Department.

Nichols KM, Caperell K, Cross K, Duncan S, Foster B, Liu G, Pritchard H, Southard G, Shinabery B, Sutton B, Kim IK.

Pediatr Emerg Care. 2017 Feb 4. doi: 10.1097/PEC.0000000000001044. [Epub ahead of print]

PMID:
28169978
5.

Genomic signatures among Oncorhynchus nerka ecotypes to inform conservation and management of endangered Sockeye Salmon.

Nichols KM, Kozfkay CC, Narum SR.

Evol Appl. 2016 Oct 21;9(10):1285-1300. eCollection 2016 Dec.

6.

RNA-seq reveals differential gene expression in the brains of juvenile resident and migratory smolt rainbow trout (Oncorhynchus mykiss).

Hale MC, McKinney GJ, Thrower FP, Nichols KM.

Comp Biochem Physiol Part D Genomics Proteomics. 2016 Dec;20:136-150. doi: 10.1016/j.cbd.2016.07.006. Epub 2016 Sep 4.

PMID:
27693967
7.

MicroRNAs are involved in cadmium tolerance in Daphnia pulex.

Chen S, Nichols KM, Poynton HC, Sepúlveda MS.

Aquat Toxicol. 2016 Jun;175:241-8. doi: 10.1016/j.aquatox.2016.03.023. Epub 2016 Apr 2.

PMID:
27078211
8.

Novel Cadmium Responsive MicroRNAs in Daphnia pulex.

Chen S, McKinney GJ, Nichols KM, Colbourne JK, Sepúlveda MS.

Environ Sci Technol. 2015 Dec 15;49(24):14605-13. doi: 10.1021/acs.est.5b03988. Epub 2015 Nov 20.

PMID:
26550707
9.

Phylogenomics Reveals Convergent Evolution of Lifestyles in Close Relatives of Animals and Fungi.

Torruella G, de Mendoza A, Grau-Bové X, Antó M, Chaplin MA, del Campo J, Eme L, Pérez-Cordón G, Whipps CM, Nichols KM, Paley R, Roger AJ, Sitjà-Bobadilla A, Donachie S, Ruiz-Trillo I.

Curr Biol. 2015 Sep 21;25(18):2404-10. doi: 10.1016/j.cub.2015.07.053. Epub 2015 Sep 10.

10.

Migration-related phenotypic divergence is associated with epigenetic modifications in rainbow trout.

Baerwald MR, Meek MH, Stephens MR, Nagarajan RP, Goodbla AM, Tomalty KMH, Thorgaard GH, May B, Nichols KM.

Mol Ecol. 2016 Apr;25(8):1785-1800. doi: 10.1111/mec.13231. Epub 2015 Jun 5.

11.

Quantitative genetics of migration-related traits in rainbow and steelhead trout.

Hecht BC, Hard JJ, Thrower FP, Nichols KM.

G3 (Bethesda). 2015 Mar 16;5(5):873-89. doi: 10.1534/g3.114.016469.

12.

Ontogenetic changes in embryonic and brain gene expression in progeny produced from migratory and resident Oncorhynchus mykiss.

McKinney GJ, Hale MC, Goetz G, Gribskov M, Thrower FP, Nichols KM.

Mol Ecol. 2015 Apr;24(8):1792-809. doi: 10.1111/mec.13143. Epub 2015 Apr 2.

PMID:
25735875
13.

Genetic and morphological divergence in three strains of brook trout Salvelinus fontinalis commonly stocked in Lake Superior.

McKinney GJ, Varian A, Scardina J, Nichols KM.

PLoS One. 2014 Dec 5;9(12):e113809. doi: 10.1371/journal.pone.0113809. eCollection 2014. Erratum in: PLoS One. 2015;10(3):e0118278.

14.

Divergence in expression of candidate genes for the smoltification process between juvenile resident rainbow and anadromous steelhead trout.

Hecht BC, Valle ME, Thrower FP, Nichols KM.

Mar Biotechnol (NY). 2014 Dec;16(6):638-56. doi: 10.1007/s10126-014-9579-7. Epub 2014 Jun 21.

PMID:
24952010
15.

Mapping and Expression of Candidate Genes for Development Rate in Rainbow Trout (Oncorhynchus mykiss).

Hale MC, Colletti JA, Gahr SA, Scardina J, Thrower FP, Harmon M, Carter M, Phillips RB, Thorgaard GH, Rexroad CE 3rd, Nichols KM.

J Hered. 2014 Jul-Aug;105(4):506-520. Epub 2014 Apr 17.

PMID:
24744432
16.

In silico prediction and in vivo validation of Daphnia pulex microRNAs.

Chen S, McKinney GJ, Nichols KM, Sepúlveda MS.

PLoS One. 2014 Jan 6;9(1):e83708. doi: 10.1371/journal.pone.0083708. eCollection 2014.

17.

Fitness consequences of dispersal: is leaving home the best of a bad lot?

Waser PM, Nichols KM, Hadfield JD.

Ecology. 2013 Jun;94(6):1287-95.

PMID:
23923492
18.

Evaluating adaptive divergence between migratory and nonmigratory ecotypes of a salmonid fish, Oncorhynchus mykiss.

Hale MC, Thrower FP, Berntson EA, Miller MR, Nichols KM.

G3 (Bethesda). 2013 Aug 7;3(8):1273-85. doi: 10.1534/g3.113.006817.

19.

Mapping rainbow trout immune genes involved in inflammation reveals conserved blocks of immune genes in teleosts.

Phillips RB, Ventura AB, Dekoning JJ, Nichols KM.

Anim Genet. 2013 Feb;44(1):107-13. doi: 10.1111/j.1365-2052.2011.02314.x. Epub 2012 Sep 26.

PMID:
23013476
20.

Genetic architecture of migration-related traits in rainbow and steelhead trout, Oncorhynchus mykiss.

Hecht BC, Thrower FP, Hale MC, Miller MR, Nichols KM.

G3 (Bethesda). 2012 Sep;2(9):1113-27. doi: 10.1534/g3.112.003137. Epub 2012 Sep 1.

21.

Differential gene expression in male and female rainbow trout embryos prior to the onset of gross morphological differentiation of the gonads.

Hale MC, Xu P, Scardina J, Wheeler PA, Thorgaard GH, Nichols KM.

BMC Genomics. 2011 Aug 8;12:404. doi: 10.1186/1471-2164-12-404.

22.

Heritability of morphology in brook trout with variable life histories.

Varian A, Nichols KM.

PLoS One. 2010 Sep 23;5(9):e12950. doi: 10.1371/journal.pone.0012950.

23.

Transcriptome profiling of embryonic development rate in rainbow trout advanced backcross introgression lines.

Xu P, McIntyre LM, Scardina J, Wheeler PA, Thorgaard GH, Nichols KM.

Mar Biotechnol (NY). 2011 Apr;13(2):215-31. doi: 10.1007/s10126-010-9283-1. Epub 2010 Mar 30.

PMID:
20352270
24.

Allergic skin disease: major highlights and recent advances.

Nichols KM, Cook-Bolden FE.

Med Clin North Am. 2009 Nov;93(6):1211-24. doi: 10.1016/j.mcna.2009.08.004. Review.

PMID:
19932327
25.

Recombination is suppressed over a large region of the rainbow trout Y chromosome.

Phillips RB, DeKoning JJ, Ventura AB, Nichols KM, Drew RE, Chaves LD, Reed KM, Felip A, Thorgaard GH.

Anim Genet. 2009 Dec;40(6):925-32. doi: 10.1111/j.1365-2052.2009.01944.x. Epub 2009 Sep 10.

PMID:
19744144
26.

The genetic basis of smoltification-related traits in Oncorhynchus mykiss.

Nichols KM, Edo AF, Wheeler PA, Thorgaard GH.

Genetics. 2008 Jul;179(3):1559-75. doi: 10.1534/genetics.107.084251. Epub 2008 Jun 18.

27.

Quantitative trait loci x maternal cytoplasmic environment interaction for development rate in Oncorhynchus mykiss.

Nichols KM, Broman KW, Sundin K, Young JM, Wheeler PA, Thorgaard GH.

Genetics. 2007 Jan;175(1):335-47. Epub 2006 Oct 22.

28.

Assignment of rainbow trout linkage groups to specific chromosomes.

Phillips RB, Nichols KM, DeKoning JJ, Morasch MR, Keatley KA, Rexroad C 3rd, Gahr SA, Danzmann RG, Drew RE, Thorgaard GH.

Genetics. 2006 Nov;174(3):1661-70. Epub 2006 Sep 1.

29.

Comprehensive gene expression profiling following DNA vaccination of rainbow trout against infectious hematopoietic necrosis virus.

Purcell MK, Nichols KM, Winton JR, Kurath G, Thorgaard GH, Wheeler P, Hansen JD, Herwig RP, Park LK.

Mol Immunol. 2006 May;43(13):2089-106. Epub 2006 Jan 19.

PMID:
16426680
30.

Model selection in binary trait locus mapping.

Coffman CJ, Doerge RW, Simonsen KL, Nichols KM, Duarte CK, Wolfinger RD, McIntyre LM.

Genetics. 2005 Jul;170(3):1281-97. Epub 2005 Apr 16.

31.

Mapping multiple genetic loci associated with Ceratomyxa shasta resistance in Oncorhynchus mykiss.

Nichols KM, Bartholomew J, Thorgaard GH.

Dis Aquat Organ. 2003 Sep 24;56(2):145-54.

32.

Examination of reproductive endpoints in goldfish (Carassius auratus) exposed in situ to municipal sewage treatment plant effluent discharges in Michigan, USA.

Giesy JP, Snyder EM, Nichols KM, Snyder SA, Villalobos SA, Jones PD, Fitzgerald SD.

Environ Toxicol Chem. 2003 Oct;22(10):2416-31.

PMID:
14552007
33.

A consolidated linkage map for rainbow trout (Oncorhynchus mykiss).

Nichols KM, Young WP, Danzmann RG, Robison BD, Rexroad C, Noakes M, Phillips RB, Bentzen P, Spies I, Knudsen K, Allendorf FW, Cunningham BM, Brunelli J, Zhang H, Ristow S, Drew R, Brown KH, Wheeler PA, Thorgaard GH.

Anim Genet. 2003 Apr;34(2):102-15.

PMID:
12648093
34.

Cloning novel immune-type inhibitory receptors from the rainbow trout, Oncorhynchus mykiss.

Yoder JA, Mueller MG, Nichols KM, Ristow SS, Thorgaard GH, Ota T, Litman GW.

Immunogenetics. 2002 Dec;54(9):662-70. Epub 2002 Nov 16.

PMID:
12466899
35.

Effects of nonylphenol ethoxylate exposure on reproductive output and bioindicators of environmental estrogen exposure in fathead minnows Pimephales promelas.

Nichols KM, Snyder EM, Snyder SA, Pierens SL, Miles-Richardson SR, Giesy JP.

Environ Toxicol Chem. 2001 Mar;20(3):510-22.

PMID:
11349851
36.

In vitro vitellogenin production by carp (Cyprinus carpio) hepatocytes as a screening method for determining (anti)estrogenic activity of xenobiotics.

Smeets JM, Rankouhi TR, Nichols KM, Komen H, Kaminski NE, Giesy JP, van den Berg M.

Toxicol Appl Pharmacol. 1999 May 15;157(1):68-76.

PMID:
10329509
37.

Effects of waterborne exposure to 4-nonylphenol and nonylphenol ethoxylate on secondary sex characteristics and gonads of fathead minnows (Pimephales promelas).

Miles-Richardson SR, Pierens SL, Nichols KM, Kramer VJ, Snyder EM, Snyder SA, Render JA, Fitzgerald SD, Giesy JP.

Environ Res. 1999 Feb;80(2 Pt 2):S122-S137.

PMID:
10092426
38.

Clear cell neoplasm.

Nichols C, Geist RY, Nichols KM.

J Laryngol Otol. 1992 Jun;106(6):553-5.

PMID:
1624896
39.
40.

Flagellar waveform reversal in Euglena.

Nichols KM, Rikmenspoel R.

Exp Cell Res. 1980 Oct;129(2):377-81. No abstract available.

PMID:
6775968
41.

Effects of Mg2+ and Ca2+ on photoinduced Euglena flagellar responses.

Nichols KM, Jacklet A, Rikmenspoel R.

J Cell Biol. 1980 Feb;84(2):355-63.

42.

Control of flagellar motility in Euglena and Chlamydomonas. Microinjection of EDTA, EGTA, Mn(2)+, and Zn(2)+.

Nichols KM, Rikmenspoel R.

Exp Cell Res. 1978 Oct 15;116(2):333-40. No abstract available.

PMID:
101381
43.
44.

Mg2+-dependent electrical control of flagellar activity in Euglena.

Nichols KM, Rikmenspoel R.

J Cell Sci. 1977 Feb;23:211-25.

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