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Simultaneous radiation of bird and mammal lice following the K-Pg boundary.

Johnson KP, Nguyen NP, Sweet AD, Boyd BM, Warnow T, Allen JM.

Biol Lett. 2018 May;14(5). pii: 20180141. doi: 10.1098/rsbl.2018.0141.


Phase I-II Study of Short-course Accelerated Radiotherapy (SHARON) for Palliation in Head and Neck Cancer.

Farina E, Capuccini J, Macchia G, Caravatta L, Nguyen NP, Cammelli S, Farioli A, Zanirato Rambaldi G, Cilla S, Wondemagegnhu T, Uddin AFMK, Sumon MA, Genovesi D, Buwenge M, Cellini F, Valentini V, Deodato F, Morganti AG.

Anticancer Res. 2018 Apr;38(4):2409-2414.


Postoperative Hypofractionated Radiation Therapy in Prostate Carcinoma: A Systematic Review.

Siepe G, Buwenge M, Nguyen NP, Macchia G, Deodato F, Cilla S, Mattiucci GC, Capocaccia I, Cammelli S, Guido A, Arcelli A, Ntreta M, Guerri S, Morganti AG.

Anticancer Res. 2018 Mar;38(3):1221-1230. Review.


Short course accelerated radiation therapy (SHARON) in palliative treatment of advanced solid cancer in older patients: A pooled analysis.

Farina E, Capuccini J, Macchia G, Caravatta L, Nguyen NP, Cammelli S, Zanirato Rambaldi G, Cilla S, Wondemagegnhu T, Uddin AFMK, Sumon MA, Genovesi D, Buwenge M, Cellini F, Valentini V, Deodato F, Morganti AG.

J Geriatr Oncol. 2018 Feb 1. pii: S1879-4068(18)30016-X. doi: 10.1016/j.jgo.2018.01.004. [Epub ahead of print]


Hypofractionated Postoperative IMRT in Prostate Carcinoma: A Phase I/II Study.

Macchia G, Siepe G, Capocaccia I, Nguyen NP, Schiavina R, Cammelli S, Guerri S, Arcelli A, Buwenge M, Ntreta M, Cilla S, Valentini V, Deodato F, Morganti AG.

Anticancer Res. 2017 Oct;37(10):5821-5828.


Preoperative [18]fluorodeoxyglucose-positron emission tomography/computed tomography in early stage breast cancer: Rates of distant metastases.

Vinh-Hung V, Everaert H, Farid K, Djassemi N, Baudin-Veronique J, Bougas S, Michailovich Y, Joachim-Contaret C, Cécilia-Joseph E, Verschraegen C, Nguyen NP.

World J Radiol. 2017 Jul 28;9(7):312-320. doi: 10.4329/wjr.v9.i7.312.


Primates, Lice and Bacteria: Speciation and Genome Evolution in the Symbionts of Hominid Lice.

Boyd BM, Allen JM, Nguyen NP, Vachaspati P, Quicksall ZS, Warnow T, Mugisha L, Johnson KP, Reed DL.

Mol Biol Evol. 2017 Jul 1;34(7):1743-1757. doi: 10.1093/molbev/msx117.


HIPPI: highly accurate protein family classification with ensembles of HMMs.

Nguyen NP, Nute M, Mirarab S, Warnow T.

BMC Genomics. 2016 Nov 11;17(Suppl 10):765. doi: 10.1186/s12864-016-3097-0.


Phylogenomics from Whole Genome Sequences Using aTRAM.

Allen JM, Boyd B, Nguyen NP, Vachaspati P, Warnow T, Huang DI, Grady PGS, Bell KC, Cronk QCB, Mugisha L, Pittendrigh BR, Leonardi MS, Reed DL, Johnson KP.

Syst Biol. 2017 Sep 1;66(5):786-798. doi: 10.1093/sysbio/syw105.


Phylogenomics using Target-Restricted Assembly Resolves Intrageneric Relationships of Parasitic Lice (Phthiraptera: Columbicola).

Boyd BM, Allen JM, Nguyen NP, Sweet AD, Warnow T, Shapiro MD, Villa SM, Bush SE, Clayton DH, Johnson KP.

Syst Biol. 2017 Nov 1;66(6):896-911. doi: 10.1093/sysbio/syx027.


Is surgery indicated for elderly patients with early stage nonsmall cell lung cancer, in the era of stereotactic body radiotherapy?

Nguyen NP, Godinez J, Shen W, Vinh-Hung V, Gorobets H, Thariat J, Ampil F, Vock J, Karlsson U, Chi A; International Geriatric Radiotherapy Group.

Medicine (Baltimore). 2016 Oct;95(43):e5212. Review.


Cap0037, a Novel Global Regulator of Clostridium acetobutylicum Metabolism.

Nguyen NP, Linder S, Flitsch SK, Schiel-Bengelsdorf B, Dürre P, Soucaille P.

MBio. 2016 Oct 4;7(5). pii: e01218-16. doi: 10.1128/mBio.01218-16.


High diversity of picornaviruses in rats from different continents revealed by deep sequencing.

Hansen TA, Mollerup S, Nguyen NP, White NE, Coghlan M, Alquezar-Planas DE, Joshi T, Jensen RH, Fridholm H, Kjartansdóttir KR, Mourier T, Warnow T, Belsham GJ, Bunce M, Willerslev E, Nielsen LP, Vinner L, Hansen AJ.

Emerg Microbes Infect. 2016 Aug 17;5(8):e90. doi: 10.1038/emi.2016.90.


Oral sex and oropharyngeal cancer: The role of the primary care physicians.

Nguyen NP, Nguyen LM, Thomas S, Hong-Ly B, Chi A, Vos P, Karlsson U, Vinh-Hung V; International Geriatric Radiation Oncology Group.

Medicine (Baltimore). 2016 Jul;95(28):e4228. doi: 10.1097/MD.0000000000004228. Review.


A perspective on 16S rRNA operational taxonomic unit clustering using sequence similarity.

Nguyen NP, Warnow T, Pop M, White B.

NPJ Biofilms Microbiomes. 2016 Apr 20;2:16004. doi: 10.1038/npjbiofilms.2016.4. eCollection 2016.


[Consensus validation of a tool to identify inappropriate prescribing in pediatrics (POPI)].

Prot-Labarthe S, Weil T, Nguyen NP, Berthe-Aucejo A, Angoulvant F, Boulkedid R, Alberti C, Bourdon O.

Arch Pediatr. 2016 May;23(5):481-90. doi: 10.1016/j.arcped.2016.02.010. Epub 2016 Apr 8. French.


Construction of a restriction-less, marker-less mutant useful for functional genomic and metabolic engineering of the biofuel producer Clostridium acetobutylicum.

Croux C, Nguyen NP, Lee J, Raynaud C, Saint-Prix F, Gonzalez-Pajuelo M, Meynial-Salles I, Soucaille P.

Biotechnol Biofuels. 2016 Feb 2;9:23. doi: 10.1186/s13068-016-0432-2. eCollection 2016.


A New Cytotoxic Gymnomitrane Sesquiterpene from Ganoderma lucidum Fruiting Bodies.

Binh PT, Descoutures D, Dang NH, Nguyen NP, Dat NT.

Nat Prod Commun. 2015 Nov;10(11):1911-2.


Helmet regulation in Vietnam: impact on health, equity and medical impoverishment.

Olson Z, Staples JA, Mock C, Nguyen NP, Bachani AM, Nugent R, Verguet S.

Inj Prev. 2016 Aug;22(4):233-8. doi: 10.1136/injuryprev-2015-041650. Epub 2016 Jan 4.


Editorial: Image-Guided Radiotherapy for Effective Radiotherapy Delivery.

Nguyen NP, Karlsson UL.

Front Oncol. 2015 Nov 18;5:253. doi: 10.3389/fonc.2015.00253. eCollection 2015. No abstract available.


Motivation for smoking cessation among drug-using smokers under methadone maintenance treatment in Vietnam.

Tran BX, Nguyen LH, Do HP, Nguyen NP, Phan HT, Dunne M, Latkin C.

Harm Reduct J. 2015 Oct 30;12:50. doi: 10.1186/s12954-015-0085-7.


Mobilization for HIV Voluntary Counseling and Testing Services in Vietnam: Clients' Risk Behaviors, Attitudes and Willingness to Pay.

Nguyen LH, Tran BX, Nguyen NP, Phan HT, Bui TT, Latkin CA.

AIDS Behav. 2016 Apr;20(4):848-58. doi: 10.1007/s10461-015-1188-6.


Intramolecular [2 + 2] Photodimerization Achieved in the Solid State via Coordination-Driven Self-Assembly.

Laird RC, Sinnwell MA, Nguyen NP, Swenson DC, Mariappan SV, MacGillivray LR.

Org Lett. 2015 Jul 2;17(13):3233-5. doi: 10.1021/acs.orglett.5b00527. Epub 2015 Jun 16.


Ultra-large alignments using phylogeny-aware profiles.

Nguyen NP, Mirarab S, Kumar K, Warnow T.

Genome Biol. 2015 Jun 16;16:124. doi: 10.1186/s13059-015-0688-z.


Image-guided radiotherapy and -brachytherapy for cervical cancer.

Dutta S, Nguyen NP, Vock J, Kerr C, Godinez J, Bose S, Jang S, Chi A, Almeida F, Woods W, Desai A, David R, Karlsson UL, Altdorfer G; International Geriatric Radiotherapy Group.

Front Oncol. 2015 Mar 17;5:64. doi: 10.3389/fonc.2015.00064. eCollection 2015. Review.


Prevalence of cigarette smoking and associated factors in a large sample of HIV-positive patients receiving antiretroviral therapy in Vietnam.

Nguyen NP, Tran BX, Hwang LY, Markham CM, Swartz MD, Phan HT, Nong VM, Nguyen CT, Nguyen AH, Latkin CA, Vidrine DJ.

PLoS One. 2015 Feb 27;10(2):e0118185. doi: 10.1371/journal.pone.0118185. eCollection 2015.


Potential applications of image-guided radiotherapy for radiation dose escalation in patients with early stage high-risk prostate cancer.

Nguyen NP, Davis R, Bose SR, Dutta S, Vinh-Hung V, Chi A, Godinez J, Desai A, Woods W, Altdorfer G, D'Andrea M, Karlsson U, Vo RA, Sroka T; International Geriatric Radiotherapy Group.

Front Oncol. 2015 Feb 2;5:18. doi: 10.3389/fonc.2015.00018. eCollection 2015. Review.


Carboplatin-pemetrexed in treatment of patients with recurrent/metastatic cancers of the head and neck; superior outcomes in oropharyngeal primaries.

Malhotra B, Bellile EL, Nguyen NP, Fung VK, Slack M, Bilich R, Papagerakis S, Worden F.

Front Oncol. 2015 Jan 26;4:362. doi: 10.3389/fonc.2014.00362. eCollection 2014.


Feasibility of image-guided radiotherapy and concurrent chemotherapy for locally advanced nonsmall cell lung cancer.

Nguyen NP, Kratz S, Chi A, Vock J, Vos P, Shen W, Vincent VH, Ewell L, Jang S, Altdorfer G, Karlsson U, Godinez J, Woods W, Dutta S, Ampil F; International Geriatric Radiotherapy Group.

Cancer Invest. 2015 Mar;33(3):53-60. doi: 10.3109/07357907.2014.1001896. Epub 2015 Jan 29.


An improved HPLC-DAD method for quantitative comparisons of triterpenes in Ganoderma lucidum and its five related species originating from Vietnam.

Ha do T, Loan le T, Hung TM, Han le VN, Khoi NM, Dung le V, Min BS, Nguyen NP.

Molecules. 2015 Jan 9;20(1):1059-77. doi: 10.3390/molecules20011059.


TIPP: taxonomic identification and phylogenetic profiling.

Nguyen NP, Mirarab S, Liu B, Pop M, Warnow T.

Bioinformatics. 2014 Dec 15;30(24):3548-55. doi: 10.1093/bioinformatics/btu721. Epub 2014 Oct 29.


The utility of positron emission tomography in the treatment planning of image-guided radiotherapy for non-small cell lung cancer.

Chi A, Nguyen NP.

Front Oncol. 2014 Oct 7;4:273. doi: 10.3389/fonc.2014.00273. eCollection 2014. Review.


Feasibility of tomotherapy for postoperative irradiation of lower extremity sarcomas.

Nguyen NP, Vock J, Vinh-Hung V, Khan R, Slane B, Sroka T, Jang S, Dias V, Vo RA, Karlsson U, Chi A.

Tumori. 2014 Jul-Aug;100(4):466-9. doi: 10.1700/1636.17914.


Image-guided radiotherapy for cardiac sparing in patients with left-sided breast cancer.

Lemanski C, Thariat J, Ampil FL, Bose S, Vock J, Davis R, Chi A, Dutta S, Woods W, Desai A, Godinez J, Karlsson U, Mills M, Nguyen NP, Vinh-Hung V; International Geriatric Radiotherapy Group.

Front Oncol. 2014 Sep 23;4:257. doi: 10.3389/fonc.2014.00257. eCollection 2014. Review.


Effectiveness of radiotherapy for elderly patients with non-melanoma skin cancer of the head.

Nguyen NP, Ries T, Vock J, Vos P, Chi A, Vinh-Hung V, Thompson S, Desai A, Sroka T, Vo RA, Gelumbauskas S, Hamilton R, Karlsson U, Mignault A; International Geriatric Radiotherapy Group.

Geriatr Gerontol Int. 2015 May;15(5):601-5. doi: 10.1111/ggi.12319. Epub 2014 Sep 26.


4D PET/CT as a Strategy to Reduce Respiratory Motion Artifacts in FDG-PET/CT.

Chi A, Nguyen NP.

Front Oncol. 2014 Aug 4;4:205. doi: 10.3389/fonc.2014.00205. eCollection 2014. Review.


Strategies of dose escalation in the treatment of locally advanced non-small cell lung cancer: image guidance and beyond.

Chi A, Nguyen NP, Welsh JS, Tse W, Monga M, Oduntan O, Almubarak M, Rogers J, Remick SC, Gius D.

Front Oncol. 2014 Jun 20;4:156. doi: 10.3389/fonc.2014.00156. eCollection 2014. Review.


The potential role of magnetic resonance spectroscopy in image-guided radiotherapy.

Nguyen ML, Willows B, Khan R, Chi A, Kim L, Nour SG, Sroka T, Kerr C, Godinez J, Mills M, Karlsson U, Altdorfer G, Nguyen NP, Jendrasiak G; International Geriatric Radiotherapy Group.

Front Oncol. 2014 May 5;4:91. doi: 10.3389/fonc.2014.00091. eCollection 2014. Review.


Noncentrosymmetric Packings Influenced by Electronic Properties of Products of Click Reactions.

Laird RC, Nguyen NP, Rusch SF, Baltrusaitis J, Macgillivray LR.

Cryst Growth Des. 2014 Mar 5;14(3):893-896. Epub 2014 Feb 17.


Oral epithelial stem cells - implications in normal development and cancer metastasis.

Papagerakis S, Pannone G, Zheng L, About I, Taqi N, Nguyen NP, Matossian M, McAlpin B, Santoro A, McHugh J, Prince ME, Papagerakis P.

Exp Cell Res. 2014 Jul 15;325(2):111-29. doi: 10.1016/j.yexcr.2014.04.021. Epub 2014 May 5. Review.


Feasibility of intensity-modulated and image-guided radiotherapy for locally advanced esophageal cancer.

Nguyen NP, Jang S, Vock J, Vinh-Hung V, Chi A, Vos P, Pugh J, Vo RA, Ceizyk M, Desai A, Smith-Raymond L; International Geriatric Radiotherapy Group.

BMC Cancer. 2014 Apr 17;14:265. doi: 10.1186/1471-2407-14-265.


Dynamic social community detection and its applications.

Nguyen NP, Dinh TN, Shen Y, Thai MT.

PLoS One. 2014 Apr 10;9(4):e91431. doi: 10.1371/journal.pone.0091431. eCollection 2014.


Prioritizing environmental justice and equality: diesel emissions in southern California.

Marshall JD, Swor KR, Nguyen NP.

Environ Sci Technol. 2014 Apr 1;48(7):4063-8. doi: 10.1021/es405167f. Epub 2014 Mar 11.


HIV infection, risk factors, and preventive services utilization among female sex workers in the Mekong Delta Region of Vietnam.

Tran BX, Nguyen TV, Pham QD, Nguyen PD, Khuu NV, Nguyen NP, Bui DH, Thi Phan HT, Nguyen LT.

PLoS One. 2014 Jan 24;9(1):e86267. doi: 10.1371/journal.pone.0086267. eCollection 2014.


Defining 'upper mediastinal irradiation' in secondary subglottic laryngeal cancer.

Ampil FL, Nguyen NP.

Oral Oncol. 2014 Apr;50(4):e15-6. doi: 10.1016/j.oraloncology.2013.12.022. Epub 2014 Jan 13. No abstract available.


What would be the most appropriate α/β ratio in the setting of stereotactic body radiation therapy for early stage non-small cell lung cancer.

Chi A, Wen S, Liao Z, Fowler J, Xu J, Nguyen NP, Welsh JS, Komaki R.

Biomed Res Int. 2013;2013:391021. doi: 10.1155/2013/391021. Epub 2013 Nov 20. Review.


Feasibility of tomotherapy-based image-guided radiotherapy for small cell lung cancer.

Nguyen NP, Shen W, Kratz S, Vock J, Vos P, Vincent VH, Altdorfer G, Ewell L, Jang S, Karlsson U, Godinez J, Mills M, Sroka T, Dutta S, Chi A; International Geriatric Radiotherapy Group.

Front Oncol. 2013 Nov 26;3:289. doi: 10.3389/fonc.2013.00289. eCollection 2013.


Potential applications of imaging and image-guided radiotherapy for brain metastases and glioblastoma to improve patient quality of life.

Nguyen NP, Nguyen ML, Vock J, Lemanski C, Kerr C, Vinh-Hung V, Chi A, Khan R, Woods W, Altdorfer G, D'Andrea M, Karlsson U, Hamilton R, Ampil F.

Front Oncol. 2013 Nov 19;3:284. doi: 10.3389/fonc.2013.00284. Review.


Feasibility of image-guided radiotherapy for elderly patients with locally advanced rectal cancer.

Nguyen NP, Ceizyk M, Vock J, Vos P, Chi A, Vinh-Hung V, Pugh J, Khan R, Truong C, Albala G, Locke A, Karlsson U, Gelumbauskas S, Smith-Raymond L.

PLoS One. 2013 Aug 13;8(8):e71250. doi: 10.1371/journal.pone.0071250. eCollection 2013.

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