Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 39

1.

Phosphorus, not nitrogen, limits plants and microbial primary producers following glacial retreat.

Darcy JL, Schmidt SK, Knelman JE, Cleveland CC, Castle SC, Nemergut DR.

Sci Adv. 2018 May 23;4(5):eaaq0942. doi: 10.1126/sciadv.aaq0942. eCollection 2018 May.

2.

Dissolved fulvic acids from a high arsenic aquifer shuttle electrons to enhance microbial iron reduction.

Kulkarni HV, Mladenov N, McKnight DM, Zheng Y, Kirk MF, Nemergut DR.

Sci Total Environ. 2018 Feb 15;615:1390-1395. doi: 10.1016/j.scitotenv.2017.09.164. Epub 2017 Oct 17.

PMID:
29751443
3.

Oligotrophic wetland sediments susceptible to shifts in microbiomes and mercury cycling with dissolved organic matter addition.

Graham EB, Gabor RS, Schooler S, McKnight DM, Nemergut DR, Knelman JE.

PeerJ. 2018 Apr 3;6:e4575. doi: 10.7717/peerj.4575. eCollection 2018.

4.

Nutrient limitation of soil microbial activity during the earliest stages of ecosystem development.

Castle SC, Sullivan BW, Knelman J, Hood E, Nemergut DR, Schmidt SK, Cleveland CC.

Oecologia. 2017 Nov;185(3):513-524. doi: 10.1007/s00442-017-3965-6. Epub 2017 Oct 5.

PMID:
28983721
5.

Plant community and soil chemistry responses to long-term nitrogen inputs drive changes in alpine bacterial communities.

Yuan X, Knelman JE, Gasarch E, Wang D, Nemergut DR, Seastedt TR.

Ecology. 2016 Jun;97(6):1543-54.

PMID:
27459784
6.

Microbes as Engines of Ecosystem Function: When Does Community Structure Enhance Predictions of Ecosystem Processes?

Graham EB, Knelman JE, Schindlbacher A, Siciliano S, Breulmann M, Yannarell A, Beman JM, Abell G, Philippot L, Prosser J, Foulquier A, Yuste JC, Glanville HC, Jones DL, Angel R, Salminen J, Newton RJ, Bürgmann H, Ingram LJ, Hamer U, Siljanen HM, Peltoniemi K, Potthast K, Bañeras L, Hartmann M, Banerjee S, Yu RQ, Nogaro G, Richter A, Koranda M, Castle SC, Goberna M, Song B, Chatterjee A, Nunes OC, Lopes AR, Cao Y, Kaisermann A, Hallin S, Strickland MS, Garcia-Pausas J, Barba J, Kang H, Isobe K, Papaspyrou S, Pastorelli R, Lagomarsino A, Lindström ES, Basiliko N, Nemergut DR.

Front Microbiol. 2016 Feb 24;7:214. doi: 10.3389/fmicb.2016.00214. eCollection 2016.

7.

Decreases in average bacterial community rRNA operon copy number during succession.

Nemergut DR, Knelman JE, Ferrenberg S, Bilinski T, Melbourne B, Jiang L, Violle C, Darcy JL, Prest T, Schmidt SK, Townsend AR.

ISME J. 2016 May;10(5):1147-56. doi: 10.1038/ismej.2015.191. Epub 2015 Nov 13.

8.

Linking microbial community structure and microbial processes: an empirical and conceptual overview.

Bier RL, Bernhardt ES, Boot CM, Graham EB, Hall EK, Lennon JT, Nemergut DR, Osborne BB, Ruiz-González C, Schimel JP, Waldrop MP, Wallenstein MD.

FEMS Microbiol Ecol. 2015 Oct;91(10). pii: fiv113. doi: 10.1093/femsec/fiv113. Epub 2015 Sep 13. Review.

PMID:
26371074
9.

Metagenomic evidence for metabolism of trace atmospheric gases by high-elevation desert Actinobacteria.

Lynch RC, Darcy JL, Kane NC, Nemergut DR, Schmidt SK.

Front Microbiol. 2014 Dec 17;5:698. doi: 10.3389/fmicb.2014.00698. eCollection 2014.

10.

Soil bacterial community structure remains stable over a 5-year chronosequence of insect-induced tree mortality.

Ferrenberg S, Knelman JE, Jones JM, Beals SC, Bowman WD, Nemergut DR.

Front Microbiol. 2014 Dec 16;5:681. doi: 10.3389/fmicb.2014.00681. eCollection 2014.

11.

Relationships between protein-encoding gene abundance and corresponding process are commonly assumed yet rarely observed.

Rocca JD, Hall EK, Lennon JT, Evans SE, Waldrop MP, Cotner JB, Nemergut DR, Graham EB, Wallenstein MD.

ISME J. 2015 Aug;9(8):1693-9. doi: 10.1038/ismej.2014.252. Epub 2014 Dec 23. Review.

12.

The importance of interdisciplinary communication with patients about complex, chronic illnesses: our experiences as parents of a child with a craniopharyngioma.

Nemergut DR, Townsend AR.

J Pediatr Endocrinol Metab. 2015 Jan;28(1-2):3-5. doi: 10.1515/jpem-2014-0445. No abstract available.

13.

When, where and how does microbial community composition matter?

Nemergut DR, Shade A, Violle C.

Front Microbiol. 2014 Sep 26;5:497. doi: 10.3389/fmicb.2014.00497. eCollection 2014. No abstract available.

14.

Changes in community assembly may shift the relationship between biodiversity and ecosystem function.

Knelman JE, Nemergut DR.

Front Microbiol. 2014 Aug 13;5:424. doi: 10.3389/fmicb.2014.00424. eCollection 2014. No abstract available.

15.

Nutrient addition dramatically accelerates microbial community succession.

Knelman JE, Schmidt SK, Lynch RC, Darcy JL, Castle SC, Cleveland CC, Nemergut DR.

PLoS One. 2014 Jul 22;9(7):e102609. doi: 10.1371/journal.pone.0102609. eCollection 2014.

16.

Do bacterial and fungal communities assemble differently during primary succession?

Schmidt SK, Nemergut DR, Darcy JL, Lynch R.

Mol Ecol. 2014 Feb;23(2):254-8. doi: 10.1111/mec.12589.

PMID:
26010467
17.

Litter quality versus soil microbial community controls over decomposition: a quantitative analysis.

Cleveland CC, Reed SC, Keller AB, Nemergut DR, O'Neill SP, Ostertag R, Vitousek PM.

Oecologia. 2014 Jan;174(1):283-94.

PMID:
24022257
18.

Patterns and processes of microbial community assembly.

Nemergut DR, Schmidt SK, Fukami T, O'Neill SP, Bilinski TM, Stanish LF, Knelman JE, Darcy JL, Lynch RC, Wickey P, Ferrenberg S.

Microbiol Mol Biol Rev. 2013 Sep;77(3):342-56. doi: 10.1128/MMBR.00051-12. Review.

19.

Changes in assembly processes in soil bacterial communities following a wildfire disturbance.

Ferrenberg S, O'Neill SP, Knelman JE, Todd B, Duggan S, Bradley D, Robinson T, Schmidt SK, Townsend AR, Williams MW, Cleveland CC, Melbourne BA, Jiang L, Nemergut DR.

ISME J. 2013 Jun;7(6):1102-11. doi: 10.1038/ismej.2013.11. Epub 2013 Feb 14.

20.

Bacteria and diatom co-occurrence patterns in microbial mats from polar desert streams.

Stanish LF, O'Neill SP, Gonzalez A, Legg TM, Knelman J, McKnight DM, Spaulding S, Nemergut DR.

Environ Microbiol. 2013 Apr;15(4):1115-31. doi: 10.1111/j.1462-2920.2012.02872.x. Epub 2012 Sep 24.

PMID:
22998505
21.

Experimental litterfall manipulation drives large and rapid changes in soil carbon cycling in a wet tropical forest.

Leff JW, Wieder WR, Taylor PG, Townsend AR, Nemergut DR, Grandy AS, Cleveland CC.

Glob Chang Biol. 2012 Sep;18(9):2969-79. doi: 10.1111/j.1365-2486.2012.02749.x. Epub 2012 Jun 25.

PMID:
24501071
22.

Carbon, metals, and grain size correlate with bacterial community structure in sediments of a high arsenic aquifer.

Legg TM, Zheng Y, Simone B, Radloff KA, Mladenov N, González A, Knights D, Siu HC, Rahman MM, Ahmed KM, McKnight DM, Nemergut DR.

Front Microbiol. 2012 Mar 23;3:82. doi: 10.3389/fmicb.2012.00082. eCollection 2012.

23.

Phylogenetic limiting similarity and competitive exclusion.

Violle C, Nemergut DR, Pu Z, Jiang L.

Ecol Lett. 2011 Aug;14(8):782-7. doi: 10.1111/j.1461-0248.2011.01644.x. Epub 2011 Jun 14.

PMID:
21672121
24.

Global patterns in the biogeography of bacterial taxa.

Nemergut DR, Costello EK, Hamady M, Lozupone C, Jiang L, Schmidt SK, Fierer N, Townsend AR, Cleveland CC, Stanish L, Knight R.

Environ Microbiol. 2011 Jan;13(1):135-144. doi: 10.1111/j.1462-2920.2010.02315.x.

25.

Microbial community shifts influence patterns in tropical forest nitrogen fixation.

Reed SC, Townsend AR, Cleveland CC, Nemergut DR.

Oecologia. 2010 Oct;164(2):521-31. doi: 10.1007/s00442-010-1649-6. Epub 2010 May 9.

PMID:
20454976
26.

Direct sequencing of the human microbiome readily reveals community differences.

Kuczynski J, Costello EK, Nemergut DR, Zaneveld J, Lauber CL, Knights D, Koren O, Fierer N, Kelley ST, Ley RE, Gordon JI, Knight R.

Genome Biol. 2010;11(5):210. doi: 10.1186/gb-2010-11-5-210. Epub 2010 May 5. Review.

27.

Functional shifts in unvegetated, perhumid, recently-deglaciated soils do not correlate with shifts in soil bacterial community composition.

Sattin SR, Cleveland CC, Hood E, Reed SC, King AJ, Schmidt SK, Robeson MS, Ascarrunz N, Nemergut DR.

J Microbiol. 2009 Dec;47(6):673-81. doi: 10.1007/s12275-009-0194-7. Epub 2010 Feb 4.

PMID:
20127458
28.

Dissolved organic matter sources and consequences for iron and arsenic mobilization in Bangladesh aquifers.

Mladenov N, Zheng Y, Miller MP, Nemergut DR, Legg T, Simone B, Hageman C, Rahman MM, Ahmed KM, McKnight DM.

Environ Sci Technol. 2010 Jan 1;44(1):123-8. doi: 10.1021/es901472g.

PMID:
20039742
29.

Microbial activity and diversity during extreme freeze-thaw cycles in periglacial soils, 5400 m elevation, Cordillera Vilcanota, Perú.

Schmidt SK, Nemergut DR, Miller AE, Freeman KR, King AJ, Seimon A.

Extremophiles. 2009 Sep;13(5):807-16. doi: 10.1007/s00792-009-0268-9. Epub 2009 Jul 12.

PMID:
19597697
30.

The effects of chronic nitrogen fertilization on alpine tundra soil microbial communities: implications for carbon and nitrogen cycling.

Nemergut DR, Townsend AR, Sattin SR, Freeman KR, Fierer N, Neff JC, Bowman WD, Schadt CW, Weintraub MN, Schmidt SK.

Environ Microbiol. 2008 Nov;10(11):3093-105. doi: 10.1111/j.1462-2920.2008.01735.x. Epub 2008 Sep 1.

PMID:
18764871
31.

The earliest stages of ecosystem succession in high-elevation (5000 metres above sea level), recently deglaciated soils.

Schmidt SK, Reed SC, Nemergut DR, Grandy AS, Cleveland CC, Weintraub MN, Hill AW, Costello EK, Meyer AF, Neff JC, Martin AM.

Proc Biol Sci. 2008 Dec 22;275(1653):2793-802. doi: 10.1098/rspb.2008.0808.

32.

Insights and inferences about integron evolution from genomic data.

Nemergut DR, Robeson MS, Kysela RF, Martin AP, Schmidt SK, Knight R.

BMC Genomics. 2008 May 31;9:261. doi: 10.1186/1471-2164-9-261.

33.

Are all horizontal gene transfers created equal? Prospects for mechanism-based studies of HGT patterns.

Zaneveld JR, Nemergut DR, Knight R.

Microbiology. 2008 Jan;154(Pt 1):1-15. doi: 10.1099/mic.0.2007/011833-0. Review.

PMID:
18174121
34.

Biogeochemical consequences of rapid microbial turnover and seasonal succession in soil.

Schmidt SK, Costello EK, Nemergut DR, Cleveland CC, Reed SC, Weintraub MN, Meyer AF, Martin AM.

Ecology. 2007 Jun;88(6):1379-85.

PMID:
17601130
35.

Microbial community succession in an unvegetated, recently deglaciated soil.

Nemergut DR, Anderson SP, Cleveland CC, Martin AP, Miller AE, Seimon A, Schmidt SK.

Microb Ecol. 2007 Jan;53(1):110-22. Epub 2006 Dec 22.

PMID:
17186150
36.

Structure and function of alpine and arctic soil microbial communities.

Nemergut DR, Costello EK, Meyer AF, Pescador MY, Weintraub MN, Schmidt SK.

Res Microbiol. 2005 Aug;156(7):775-84. Epub 2005 Apr 7. Review.

PMID:
15922566
37.

The rate and pattern of cladogenesis in microbes.

Martin AP, Costello EK, Meyer AF, Nemergut DR, Schmidt SK.

Evolution. 2004 May;58(5):946-55.

PMID:
15212376
38.

Integron diversity in heavy-metal-contaminated mine tailings and inferences about integron evolution.

Nemergut DR, Martin AP, Schmidt SK.

Appl Environ Microbiol. 2004 Feb;70(2):1160-8.

39.

Disruption of narH, narJ, and moaE inhibits heterotrophic nitrification in Pseudomonas strain M19.

Nemergut DR, Schmidt SK.

Appl Environ Microbiol. 2002 Dec;68(12):6462-5.

Supplemental Content

Loading ...
Support Center