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Items: 1 to 50 of 63

1.

Gene expression analysis of human adipose tissue-derived stem cells during the initial steps of in vitro osteogenesis.

Robert AW, Angulski ABB, Spangenberg L, Shigunov P, Pereira IT, Bettes PSL, Naya H, Correa A, Dallagiovanna B, Stimamiglio MA.

Sci Rep. 2018 Mar 16;8(1):4739. doi: 10.1038/s41598-018-22991-6.

2.

Whole genome sequencing of the monomorphic pathogen Mycobacterium bovis reveals local differentiation of cattle clinical isolates.

Lasserre M, Fresia P, Greif G, Iraola G, Castro-Ramos M, Juambeltz A, Nuñez Á, Naya H, Robello C, Berná L.

BMC Genomics. 2018 Jan 2;19(1):2. doi: 10.1186/s12864-017-4249-6.

3.

Distinct Campylobacter fetus lineages adapted as livestock pathogens and human pathobionts in the intestinal microbiota.

Iraola G, Forster SC, Kumar N, Lehours P, Bekal S, García-Peña FJ, Paolicchi F, Morsella C, Hotzel H, Hsueh PR, Vidal A, Lévesque S, Yamazaki W, Balzan C, Vargas A, Piccirillo A, Chaban B, Hill JE, Betancor L, Collado L, Truyers I, Midwinter AC, Dagi HT, Mégraud F, Calleros L, Pérez R, Naya H, Lawley TD.

Nat Commun. 2017 Nov 8;8(1):1367. doi: 10.1038/s41467-017-01449-9.

4.

Climate change and body size trends in aquatic and terrestrial endotherms: Does habitat matter?

Naya DE, Naya H, Cook J.

PLoS One. 2017 Aug 16;12(8):e0183051. doi: 10.1371/journal.pone.0183051. eCollection 2017.

5.

Modelling female fertility traits in beef cattle using linear and non-linear models.

Naya H, Peñagaricano F, Urioste JI.

J Anim Breed Genet. 2017 Jun;134(3):202-212. doi: 10.1111/jbg.12266.

PMID:
28508488
6.

lncRNAs are associated with polysomes during adipose-derived stem cell differentiation.

Dallagiovanna B, Pereira IT, Origa-Alves AC, Shigunov P, Naya H, Spangenberg L.

Gene. 2017 Apr 30;610:103-111. doi: 10.1016/j.gene.2017.02.004. Epub 2017 Feb 7.

PMID:
28185860
7.

Understanding evolutionary variation in basal metabolic rate: An analysis in subterranean rodents.

Luna F, Naya H, Naya DE.

Comp Biochem Physiol A Mol Integr Physiol. 2017 Apr;206:87-94. doi: 10.1016/j.cbpa.2017.02.002. Epub 2017 Feb 4.

PMID:
28179141
8.

Genome-Wide Association Studies with a Genomic Relationship Matrix: A Case Study with Wheat and Arabidopsis.

Gianola D, Fariello MI, Naya H, Schön CC.

G3 (Bethesda). 2016 Oct 13;6(10):3241-3256. doi: 10.1534/g3.116.034256.

9.

Transcriptome Sequencing Reveals Wide Expression Reprogramming of Basal and Unknown Genes in Leptospira biflexa Biofilms.

Iraola G, Spangenberg L, Lopes Bastos B, Graña M, Vasconcelos L, Almeida Á, Greif G, Robello C, Ristow P, Naya H.

mSphere. 2016 Apr 6;1(2). pii: e00042-16. doi: 10.1128/mSphere.00042-16. eCollection 2016 Mar-Apr.

10.

Campylobacter geochelonis sp. nov. isolated from the western Hermann's tortoise (Testudo hermanni hermanni).

Piccirillo A, Niero G, Calleros L, Pérez R, Naya H, Iraola G.

Int J Syst Evol Microbiol. 2016 Sep;66(9):3468-3476. doi: 10.1099/ijsem.0.001219. Epub 2016 Jun 6.

PMID:
27266587
11.

3697G>A in MT-ND1 is a causative mutation in mitochondrial disease.

Spangenberg L, Graña M, Greif G, Suarez-Rivero JM, Krysztal K, Tapié A, Boidi M, Fraga V, Lemes A, Gueçaimburú R, Cerisola A, Sánchez-Alcázar JA, Robello C, Raggio V, Naya H.

Mitochondrion. 2016 May;28:54-9. doi: 10.1016/j.mito.2016.03.006. Epub 2016 Mar 24.

PMID:
27017994
12.

Genetic parameters of objectionable fibers and of their associations with fleece traits in Corriedale sheep.

Sánchez AL, Urioste JI, Peñagaricano F, Neimaur K, Sienra I, Naya H, Kremer R.

J Anim Sci. 2016 Jan;94(1):13-20. doi: 10.2527/jas.2015-9619.

PMID:
26812307
13.

Whole-Genome Sequences of Mycobacterium bovis Strain MbURU-001, Isolated from Fresh Bovine Infected Samples.

Lasserre M, Berná L, Greif G, Díaz-Viraqué F, Iraola G, Naya H, Castro-Ramos M, Juambeltz A, Robello C.

Genome Announc. 2015 Nov 5;3(6). pii: e01237-15. doi: 10.1128/genomeA.01237-15.

14.
15.

Brain size and thermoregulation during the evolution of the genus Homo.

Naya DE, Naya H, Lessa EP.

Comp Biochem Physiol A Mol Integr Physiol. 2016 Jan;191:66-73. doi: 10.1016/j.cbpa.2015.09.017. Epub 2015 Oct 3.

PMID:
26435349
16.

Do Molecular Markers Inform About Pleiotropy?

Gianola D, de los Campos G, Toro MA, Naya H, Schön CC, Sorensen D.

Genetics. 2015 Sep;201(1):23-9. doi: 10.1534/genetics.115.179978. Epub 2015 Jul 23.

17.

Profiling of small RNA cargo of extracellular vesicles shed by Trypanosoma cruzi reveals a specific extracellular signature.

Fernandez-Calero T, Garcia-Silva R, Pena A, Robello C, Persson H, Rovira C, Naya H, Cayota A.

Mol Biochem Parasitol. 2015 Jan-Feb;199(1-2):19-28. doi: 10.1016/j.molbiopara.2015.03.003. Epub 2015 Mar 17.

PMID:
25795082
18.

Genomic evidence for the emergence and evolution of pathogenicity and niche preferences in the genus Campylobacter.

Iraola G, Pérez R, Naya H, Paolicchi F, Pastor E, Valenzuela S, Calleros L, Velilla A, Hernández M, Morsella C.

Genome Biol Evol. 2014 Sep 4;6(9):2392-405. doi: 10.1093/gbe/evu195.

19.

Polysome profiling shows the identity of human adipose-derived stromal/stem cells in detail and clearly distinguishes them from dermal fibroblasts.

Zych J, Spangenberg L, Stimamiglio MA, Abud AP, Shigunov P, Marchini FK, Kuligovski C, Cofré AR, Schittini AV, Aguiar AM, Senegaglia A, Brofman PR, Goldenberg S, Dallagiovanna B, Naya H, Correa A.

Stem Cells Dev. 2014 Nov 15;23(22):2791-802. doi: 10.1089/scd.2013.0496. Epub 2014 Jul 28.

20.

Whole-Genome Sequencing of an Isoniazid-Resistant Clinical Isolate of Mycobacterium tuberculosis Strain MtURU-002 from Uruguay.

Berná L, Iraola G, Greif G, Coitinho C, Rivas CM, Naya H, Robello C.

Genome Announc. 2014 Jul 17;2(4). pii: e00655-14. doi: 10.1128/genomeA.00655-14.

21.

Activation of the PI3K/AKT pathway by microRNA-22 results in CLL B-cell proliferation.

Palacios F, Abreu C, Prieto D, Morande P, Ruiz S, Fernández-Calero T, Naya H, Libisch G, Robello C, Landoni AI, Gabus R, Dighiero G, Oppezzo P.

Leukemia. 2015 Jan;29(1):115-25. doi: 10.1038/leu.2014.158. Epub 2014 May 14.

PMID:
24825182
22.

Mining of public sequencing databases supports a non-dietary origin for putative foreign miRNAs: underestimated effects of contamination in NGS.

Tosar JP, Rovira C, Naya H, Cayota A.

RNA. 2014 Jun;20(6):754-7. doi: 10.1261/rna.044263.114. Epub 2014 Apr 11.

23.

Complete Genome Sequence of Mycobacterium tuberculosis Strain MtURU-001, Isolated from a Rapidly Progressing Outbreak in Uruguay.

Greif G, Iraola G, Berná L, Coitinho C, Rivas CM, Naya H, Robello C.

Genome Announc. 2014 Jan 23;2(1). pii: e01220-13. doi: 10.1128/genomeA.01220-13.

24.

Liver functional genomics in beef cows on grazing systems: novel genes and pathways revealed.

Laporta J, Rosa GJ, Naya H, Carriquiry M.

Physiol Genomics. 2014 Feb 15;46(4):138-47. doi: 10.1152/physiolgenomics.00120.2013. Epub 2013 Dec 10.

PMID:
24326346
25.

Extracellular vesicles shed by Trypanosoma cruzi are linked to small RNA pathways, life cycle regulation, and susceptibility to infection of mammalian cells.

Garcia-Silva MR, das Neves RF, Cabrera-Cabrera F, Sanguinetti J, Medeiros LC, Robello C, Naya H, Fernandez-Calero T, Souto-Padron T, de Souza W, Cayota A.

Parasitol Res. 2014 Jan;113(1):285-304. doi: 10.1007/s00436-013-3655-1. Epub 2013 Nov 17.

PMID:
24241124
26.

Role of alternative polyadenylation during adipogenic differentiation: an in silico approach.

Spangenberg L, Correa A, Dallagiovanna B, Naya H.

PLoS One. 2013 Oct 15;8(10):e75578. doi: 10.1371/journal.pone.0075578. eCollection 2013. Erratum in: PLoS One. 2014;9(5):e91409.

27.

Complete Genome Sequence of Campylobacter fetus subsp. venerealis Biovar Intermedius, Isolated from the Prepuce of a Bull.

Iraola G, Pérez R, Naya H, Paolicchi F, Harris D, Lawley TD, Rego N, Hernández M, Calleros L, Carretto L, Velilla A, Morsella C, Méndez A, Gioffre A.

Genome Announc. 2013 Aug 1;1(4). pii: e00526-13. doi: 10.1128/genomeA.00526-13.

28.

Thermal conductance and basal metabolic rate are part of a coordinated system for heat transfer regulation.

Naya DE, Spangenberg L, Naya H, Bozinovic F.

Proc Biol Sci. 2013 Jul 31;280(1767):20131629. doi: 10.1098/rspb.2013.1629. Print 2013 Sep 22.

29.

Polysome profiling shows extensive posttranscriptional regulation during human adipocyte stem cell differentiation into adipocytes.

Spangenberg L, Shigunov P, Abud AP, Cofré AR, Stimamiglio MA, Kuligovski C, Zych J, Schittini AV, Costa AD, Rebelatto CK, Brofman PR, Goldenberg S, Correa A, Naya H, Dallagiovanna B.

Stem Cell Res. 2013 Sep;11(2):902-12. doi: 10.1016/j.scr.2013.06.002. Epub 2013 Jun 10.

30.

How does evolutionary variation in Basal metabolic rates arise? A statistical assessment and a mechanistic model.

Naya DE, Spangenberg L, Naya H, Bozinovic F.

Evolution. 2013 May;67(5):1463-76. doi: 10.1111/evo.12042. Epub 2013 Jan 23.

PMID:
23617921
31.

Detecting signatures of selection through haplotype differentiation among hierarchically structured populations.

Fariello MI, Boitard S, Naya H, SanCristobal M, Servin B.

Genetics. 2013 Mar;193(3):929-41. doi: 10.1534/genetics.112.147231. Epub 2013 Jan 10.

32.

Reduced set of virulence genes allows high accuracy prediction of bacterial pathogenicity in humans.

Iraola G, Vazquez G, Spangenberg L, Naya H.

PLoS One. 2012;7(8):e42144. doi: 10.1371/journal.pone.0042144. Epub 2012 Aug 6.

33.

Translational selection on codon usage in the genus Aspergillus.

Iriarte A, Sanguinetti M, Fernández-Calero T, Naya H, Ramón A, Musto H.

Gene. 2012 Sep 10;506(1):98-105. doi: 10.1016/j.gene.2012.06.027. Epub 2012 Jun 26.

PMID:
22742978
34.

Latitudinal patterns in rodent metabolic flexibility.

Naya DE, Spangenberg L, Naya H, Bozinovic F.

Am Nat. 2012 Jun;179(6):E172-9. doi: 10.1086/665646. Epub 2012 Apr 27.

PMID:
22617269
35.

Search for an aetiological virus candidate in chronic lymphocytic leukaemia by extensive transcriptome analysis.

Rego N, Bianchi S, Moreno P, Persson H, Kvist A, Pena A, Oppezzo P, Naya H, Rovira C, Dighiero G, Pritsch O.

Br J Haematol. 2012 Jun;157(6):709-17. doi: 10.1111/j.1365-2141.2012.09116.x. Epub 2012 Apr 10.

PMID:
22489537
36.

Direct role of Bardet-Biedl syndrome proteins in transcriptional regulation.

Gascue C, Tan PL, Cardenas-Rodriguez M, Libisch G, Fernandez-Calero T, Liu YP, Astrada S, Robello C, Naya H, Katsanis N, Badano JL.

J Cell Sci. 2012 Jan 15;125(Pt 2):362-75. doi: 10.1242/jcs.089375. Epub 2012 Feb 2.

37.

Gene expression analysis identifies new candidate genes associated with the development of black skin spots in Corriedale sheep.

Peñagaricano F, Zorrilla P, Naya H, Robello C, Urioste JI.

J Appl Genet. 2012 Feb;53(1):99-106. doi: 10.1007/s13353-011-0066-9. Epub 2011 Sep 28.

PMID:
21952730
38.

Identifying associations between amino acid changes and meta information in alignments.

Spangenberg L, Battke F, Graña M, Nieselt K, Naya H.

Bioinformatics. 2011 Oct 15;27(20):2782-9. doi: 10.1093/bioinformatics/btr476. Epub 2011 Aug 16.

PMID:
21846738
39.

Comparative genomic analysis of dinucleotide repeats in Tritryps.

Duhagon MA, Smircich P, Forteza D, Naya H, Williams N, Garat B.

Gene. 2011 Nov 1;487(1):29-37. doi: 10.1016/j.gene.2011.07.022. Epub 2011 Jul 28.

40.

Assessment of Poisson, probit and linear models for genetic analysis of presence and number of black spots in Corriedale sheep.

Peñagaricano F, Urioste JI, Naya H, de los Campos G, Gianola D.

J Anim Breed Genet. 2011 Apr;128(2):105-13. doi: 10.1111/j.1439-0388.2010.00893.x. Epub 2010 Dec 22.

PMID:
21385225
41.

Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene.

Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C.

Cancer Res. 2011 Jan 1;71(1):78-86. doi: 10.1158/0008-5472.CAN-10-1869.

42.

Immunoglobulin heavy chain V-D-J gene rearrangement and mutational status in Uruguayan patients with chronic lymphocytic leukemia.

Bianchi S, Moreno P, Landoni AI, Naya H, Oppezzo P, Dighiero G, Gabús R, Pritsch O.

Leuk Lymphoma. 2010 Nov;51(11):2070-8. doi: 10.3109/10428194.2010.522283. Epub 2010 Oct 7.

PMID:
20929321
43.

Identification of relations between risk factors and their pathologies or health conditions by mining scientific literature.

Hamon T, Graña M, Raggio V, Grabar N, Naya H.

Stud Health Technol Inform. 2010;160(Pt 2):964-8.

PMID:
20841827
44.

L2-Boosting algorithm applied to high-dimensional problems in genomic selection.

González-Recio O, Weigel KA, Gianola D, Naya H, Rosa GJ.

Genet Res (Camb). 2010 Jun;92(3):227-37. doi: 10.1017/S0016672310000261.

PMID:
20667166
45.

Composition profile of the human genome at the chromosome level.

Sabbia V, Romero H, Musto H, Naya H.

J Biomol Struct Dyn. 2009 Dec;27(3):361-70.

PMID:
19795918
46.

Predictive ability of direct genomic values for lifetime net merit of Holstein sires using selected subsets of single nucleotide polymorphism markers.

Weigel KA, de los Campos G, González-Recio O, Naya H, Wu XL, Long N, Rosa GJ, Gianola D.

J Dairy Sci. 2009 Oct;92(10):5248-57. doi: 10.3168/jds.2009-2092.

PMID:
19762843
47.

Oxygen and guanine-cytosine profiles in marine environments.

Romero H, Pereira E, Naya H, Musto H.

J Mol Evol. 2009 Aug;69(2):203-6. doi: 10.1007/s00239-009-9230-9. Epub 2009 Jun 25.

48.

Predicting quantitative traits with regression models for dense molecular markers and pedigree.

de los Campos G, Naya H, Gianola D, Crossa J, Legarra A, Manfredi E, Weigel K, Cotes JM.

Genetics. 2009 May;182(1):375-85. doi: 10.1534/genetics.109.101501. Epub 2009 Mar 16.

49.

High-throughput screening using pseudotyped lentiviral particles: a strategy for the identification of HIV-1 inhibitors in a cell-based assay.

Garcia JM, Gao A, He PL, Choi J, Tang W, Bruzzone R, Schwartz O, Naya H, Nan FJ, Li J, Altmeyer R, Zuo JP.

Antiviral Res. 2009 Mar;81(3):239-47. doi: 10.1016/j.antiviral.2008.12.004. Epub 2008 Dec 30.

PMID:
19118579
50.

A comparison between Poisson and zero-inflated Poisson regression models with an application to number of black spots in Corriedale sheep.

Naya H, Urioste JI, Chang YM, Rodrigues-Motta M, Kremer R, Gianola D.

Genet Sel Evol. 2008 Jul-Aug;40(4):379-94. doi: 10.1051/gse:2008010. Epub 2008 Jun 17.

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