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Convergent amino acid signatures in polyphyletic Campylobacter jejuni sub-populations suggest human niche tropism.

Méric G, McNally A, Pessia A, Mourkas E, Pascoe B, Mageiros L, Vehkala M, Corander J, Sheppard SK.

Genome Biol Evol. 2018 Feb 14. doi: 10.1093/gbe/evy026. [Epub ahead of print]


Comparative genomic survey of Bacillus cereus sensu stricto isolates from the dairy production chain in Brazil.

Rossi GAM, Silva HO, Aguilar CEG, Rochetti AL, Pascoe B, Méric G, Mourkas E, Hitchings MD, Mathias LA, de Azevedo Ruiz VL, Fukumasu H, Sheppard SK, Vidal AMC.

FEMS Microbiol Lett. 2018 Feb 1;365(3). doi: 10.1093/femsle/fnx283.


Molecular epidemiology and comparative genomics of Campylobacter concisus strains from saliva, faeces and gut mucosal biopsies in inflammatory bowel disease.

Kirk KF, Méric G, Nielsen HL, Pascoe B, Sheppard SK, Thorlacius-Ussing O, Nielsen H.

Sci Rep. 2018 Jan 30;8(1):1902. doi: 10.1038/s41598-018-20135-4.


Genome Comparison of Erythromycin Resistant Campylobacter from Turkeys Identifies Hosts and Pathways for Horizontal Spread of erm(B) Genes.

Florez-Cuadrado D, Ugarte-Ruiz M, Meric G, Quesada A, Porrero MC, Pascoe B, Sáez-Llorente JL, Orozco GL, Domínguez L, Sheppard SK.

Front Microbiol. 2017 Nov 15;8:2240. doi: 10.3389/fmicb.2017.02240. eCollection 2017.


Genomic plasticity and rapid host switching can promote the evolution of generalism: a case study in the zoonotic pathogen Campylobacter.

Woodcock DJ, Krusche P, Strachan NJC, Forbes KJ, Cohan FM, Méric G, Sheppard SK.

Sci Rep. 2017 Aug 29;7(1):9650. doi: 10.1038/s41598-017-09483-9.


Comparative Genomics Study of Staphylococcus epidermidis Isolates from Orthopedic-Device-Related Infections Correlated with Patient Outcome.

Post V, Harris LG, Morgenstern M, Mageiros L, Hitchings MD, Méric G, Pascoe B, Sheppard SK, Richards RG, Moriarty TF.

J Clin Microbiol. 2017 Oct;55(10):3089-3103. doi: 10.1128/JCM.00881-17. Epub 2017 Aug 9.


Driving Forces for Nonnative Protein Aggregation and Approaches to Predict Aggregation-Prone Regions.

Meric G, Robinson AS, Roberts CJ.

Annu Rev Chem Biomol Eng. 2017 Jun 7;8:139-159. doi: 10.1146/annurev-chembioeng-060816-101404. Review.


Effectiveness of non-fluoride and fluoride dentifrices for denture hygiene.

Meriç G, Güvenir M, Suer K.

Acta Odontol Scand. 2017 Aug;75(6):437-441. doi: 10.1080/00016357.2017.1331374. Epub 2017 May 24.


Local genes for local bacteria: Evidence of allopatry in the genomes of transatlantic Campylobacter populations.

Pascoe B, Méric G, Yahara K, Wimalarathna H, Murray S, Hitchings MD, Sproston EL, Carrillo CD, Taboada EN, Cooper KK, Huynh S, Cody AJ, Jolley KA, Maiden MCJ, McCarthy ND, Didelot X, Parker CT, Sheppard SK.

Mol Ecol. 2017 Sep;26(17):4497-4508. doi: 10.1111/mec.14176. Epub 2017 Jun 19.


Bayesian identification of bacterial strains from sequencing data.

Sankar A, Malone B, Bayliss SC, Pascoe B, Méric G, Hitchings MD, Sheppard SK, Feil EJ, Corander J, Honkela A.

Microb Genom. 2016 Aug 25;2(8):e000075. doi: 10.1099/mgen.0.000075. eCollection 2016 Aug.


Population-genomic insights into emergence, crop adaptation and dissemination of Pseudomonas syringae pathogens.

Monteil CL, Yahara K, Studholme DJ, Mageiros L, Méric G, Swingle B, Morris CE, Vinatzer BA, Sheppard SK.

Microb Genom. 2016 Oct 21;2(10):e000089. doi: 10.1099/mgen.0.000089. eCollection 2016 Oct.


Recombination-Mediated Host Adaptation by Avian Staphylococcus aureus.

Murray S, Pascoe B, Méric G, Mageiros L, Yahara K, Hitchings MD, Friedmann Y, Wilkinson TS, Gormley FJ, Mack D, Bray JE, Lamble S, Bowden R, Jolley KA, Maiden MCJ, Wendlandt S, Schwarz S, Corander J, Fitzgerald JR, Sheppard SK.

Genome Biol Evol. 2017 Apr 1;9(4):830-842. doi: 10.1093/gbe/evx037.


Identification and initial characterisation of a protein involved in Campylobacter jejuni cell shape.

Esson D, Gupta S, Bailey D, Wigley P, Wedley A, Mather AE, Méric G, Mastroeni P, Sheppard SK, Thomson NR, Parkhill J, Maskell DJ, Christie G, Grant AJ.

Microb Pathog. 2017 Mar;104:202-211. doi: 10.1016/j.micpath.2017.01.042. Epub 2017 Jan 25.


Genome-Wide Identification of Host-Segregating Epidemiological Markers for Source Attribution in Campylobacter jejuni.

Thépault A, Méric G, Rivoal K, Pascoe B, Mageiros L, Touzain F, Rose V, Béven V, Chemaly M, Sheppard SK.

Appl Environ Microbiol. 2017 Mar 17;83(7). pii: e03085-16. doi: 10.1128/AEM.03085-16. Print 2017 Apr 1.


Genomic variations leading to alterations in cell morphology of Campylobacter spp.

Esson D, Mather AE, Scanlan E, Gupta S, de Vries SP, Bailey D, Harris SR, McKinley TJ, Méric G, Berry SK, Mastroeni P, Sheppard SK, Christie G, Thomson NR, Parkhill J, Maskell DJ, Grant AJ.

Sci Rep. 2016 Dec 2;6:38303. doi: 10.1038/srep38303.


Genome-wide association of functional traits linked with Campylobacter jejuni survival from farm to fork.

Yahara K, Méric G, Taylor AJ, de Vries SP, Murray S, Pascoe B, Mageiros L, Torralbo A, Vidal A, Ridley A, Komukai S, Wimalarathna H, Cody AJ, Colles FM, McCarthy N, Harris D, Bray JE, Jolley KA, Maiden MC, Bentley SD, Parkhill J, Bayliss CD, Grant A, Maskell D, Didelot X, Kelly DJ, Sheppard SK.

Environ Microbiol. 2017 Jan;19(1):361-380. doi: 10.1111/1462-2920.13628.


Comparative Genomics of Campylobacter fetus from Reptiles and Mammals Reveals Divergent Evolution in Host-Associated Lineages.

Gilbert MJ, Miller WG, Yee E, Zomer AL, van der Graaf-van Bloois L, Fitzgerald C, Forbes KJ, Méric G, Sheppard SK, Wagenaar JA, Duim B.

Genome Biol Evol. 2016 Jul 2;8(6):2006-19. doi: 10.1093/gbe/evw146.


From Escherich to the Escherichia coli genome.

Méric G, Hitchings MD, Pascoe B, Sheppard SK.

Lancet Infect Dis. 2016 Jun;16(6):634-636. doi: 10.1016/S1473-3099(16)30066-4. No abstract available.


Correction: Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

Harris LG, Murray S, Pascoe B, Bray J, Meric G, Mageiros L, Wilkinson TS, Jeeves R, Rohde H, Schwarz S, de Lencastre H, Miragaia M, Rolo J, Bowden R, Jolley KA, Maiden MC, Mack D, Sheppard SK.

PLoS One. 2016 Apr 21;11(4):e0154510. doi: 10.1371/journal.pone.0154510. eCollection 2016. No abstract available.


Bonding strategies of resin cement to Er,Cr:YSGG lased dentin: micro-CT evaluation and microshear bond strength testing.

Meriç G, Taşar S, Orhan K.

Int J Artif Organs. 2016 Feb;39(2):72-6. doi: 10.5301/ijao.5000483. Epub 2016 Mar 14.


Biofilm Morphotypes and Population Structure among Staphylococcus epidermidis from Commensal and Clinical Samples.

Harris LG, Murray S, Pascoe B, Bray J, Meric G, Mageiros L, Wilkinson TS, Jeeves R, Rohde H, Schwarz S, de Lencastre H, Miragaia M, Rolo J, Bowden R, Jolley KA, Maiden MC, Mack D, Sheppard SK.

PLoS One. 2016 Mar 15;11(3):e0151240. doi: 10.1371/journal.pone.0151240. eCollection 2016. Erratum in: PLoS One. 2016;11(4):e0154510. Magerios, Leonardos [corrected to Mageiros, Leonardos].


The impact of host metapopulation structure on the population genetics of colonizing bacteria.

Numminen E, Gutmann M, Shubin M, Marttinen P, Méric G, van Schaik W, Coque TM, Baquero F, Willems RJ, Sheppard SK, Feil EJ, Hanage WP, Corander J.

J Theor Biol. 2016 May 7;396:53-62. doi: 10.1016/j.jtbi.2016.02.019. Epub 2016 Feb 23.


Enhanced biofilm formation and multi-host transmission evolve from divergent genetic backgrounds in Campylobacter jejuni.

Pascoe B, Méric G, Murray S, Yahara K, Mageiros L, Bowen R, Jones NH, Jeeves RE, Lappin-Scott HM, Asakura H, Sheppard SK.

Environ Microbiol. 2015 Nov;17(11):4779-89. doi: 10.1111/1462-2920.13051. Epub 2015 Oct 14.


Rapid host switching in generalist Campylobacter strains erodes the signal for tracing human infections.

Dearlove BL, Cody AJ, Pascoe B, Méric G, Wilson DJ, Sheppard SK.

ISME J. 2016 Mar;10(3):721-9. doi: 10.1038/ismej.2015.149. Epub 2015 Aug 25.


In Reply.

Meric G, Gracitelli GC, Bugbee WD.

J Arthroplasty. 2016 Feb;31(2):550-1. doi: 10.1016/j.arth.2015.07.005. Epub 2015 Jul 10. No abstract available.


Outcomes of anatomic shoulder arthroplasty in primary osteoarthritis in type B glenoids.

Chin PC, Hachadorian ME, Pulido PA, Munro ML, Meric G, Hoenecke HR Jr.

J Shoulder Elbow Surg. 2015 Dec;24(12):1888-93. doi: 10.1016/j.jse.2015.05.052. Epub 2015 Aug 4.


Draft Genomes, Phylogenetic Reconstruction, and Comparative Genomics of Two Novel Cohabiting Bacterial Symbionts Isolated from Frankliniella occidentalis.

Facey PD, Méric G, Hitchings MD, Pachebat JA, Hegarty MJ, Chen X, Morgan LV, Hoeppner JE, Whitten MM, Kirk WD, Dyson PJ, Sheppard SK, Del Sol R.

Genome Biol Evol. 2015 Jul 15;7(8):2188-202. doi: 10.1093/gbe/evv136.


Osteochondral Allograft MRI Scoring System (OCAMRISS) in the Knee: Interobserver Agreement and Clinical Application.

Meric G, Gracitelli GC, McCauley JC, Pulido PA, Chang EY, Chung CB, Bugbee WD.

Cartilage. 2015 Jul;6(3):142-9. doi: 10.1177/1947603515573987.


Congenital Pseudarthrosis of Index Metacarpal Bone Treated with Distraction Osteogenesis Followed by Autologous Grafting.

Atik A, Ozyurek S, Meric G, Sargin S, Kose O, Ulusal AE.

J Hand Microsurg. 2015 Jun;7(1):152-6. doi: 10.1007/s12593-014-0128-4. Epub 2014 Mar 27. No abstract available.


Osteochondral Allograft Transplantation for Knee Lesions after Failure of Cartilage Repair Surgery.

Gracitelli GC, Meric G, Pulido PA, McCauley JC, Bugbee WD.

Cartilage. 2015 Apr;6(2):98-105. doi: 10.1177/1947603514566298.


Variability in Distal Femoral Anatomy in Patients Undergoing Total Knee Arthroplasty: Measurements on 13,546 Computed Tomography Scans.

Meric G, Gracitelli GC, Aram LJ, Swank ML, Bugbee WD.

J Arthroplasty. 2015 Oct;30(10):1835-8. doi: 10.1016/j.arth.2015.04.024. Epub 2015 Apr 25.


Utilization of the bicipital groove axis for confirming alignment of the humerus with transepicondylar and ulnar shaft axes during intramedullary nailing.

Meriç G, Zeybek G, Kıray A, Atik A, Budeyri A, Koşay C.

Acta Orthop Traumatol Turc. 2015;49(2):184-9. doi: 10.3944/AOTT.2015.14.0188.


The BstUI and DpnII Variants of the COL5A1 Gene Are Associated With Tennis Elbow.

Altinisik J, Meric G, Erduran M, Ates O, Ulusal AE, Akseki D.

Am J Sports Med. 2015 Jul;43(7):1784-9. doi: 10.1177/0363546515578661. Epub 2015 Apr 20.


Ecological Overlap and Horizontal Gene Transfer in Staphylococcus aureus and Staphylococcus epidermidis.

Méric G, Miragaia M, de Been M, Yahara K, Pascoe B, Mageiros L, Mikhail J, Harris LG, Wilkinson TS, Rolo J, Lamble S, Bray JE, Jolley KA, Hanage WP, Bowden R, Maiden MC, Mack D, de Lencastre H, Feil EJ, Corander J, Sheppard SK.

Genome Biol Evol. 2015 Apr 16;7(5):1313-28. doi: 10.1093/gbe/evv066.


Fresh osteochondral allografts in the knee: comparison of primary transplantation versus transplantation after failure of previous subchondral marrow stimulation.

Gracitelli GC, Meric G, Briggs DT, Pulido PA, McCauley JC, Belloti JC, Bugbee WD.

Am J Sports Med. 2015 Apr;43(4):885-91. doi: 10.1177/0363546514565770.


Basal cell carcinoma with halo phenomenon in a young female: significance of dermatoscopy in early diagnosis.

Basak PY, Meric G, Ciris M.

Indian J Dermatol. 2015 Mar-Apr;60(2):214. doi: 10.4103/0019-5154.152592.


Gene Loss and Lineage-Specific Restriction-Modification Systems Associated with Niche Differentiation in the Campylobacter jejuni Sequence Type 403 Clonal Complex.

Morley L, McNally A, Paszkiewicz K, Corander J, Méric G, Sheppard SK, Blom J, Manning G.

Appl Environ Microbiol. 2015 Jun;81(11):3641-7. doi: 10.1128/AEM.00546-15. Epub 2015 Mar 20.


Tibial Slope is Highly Variable in Patients Undergoing Primary Total Knee Arthroplasty: Analysis of 13,546 Computed Tomography Scans.

Meric G, Gracitelli GC, Aram L, Swank M, Bugbee WD.

J Arthroplasty. 2015 Jul;30(7):1228-32. doi: 10.1016/j.arth.2015.02.012. Epub 2015 Feb 17.


Higher resistance of Campylobacter coli compared to Campylobacter jejuni at chicken slaughterhouse.

Torralbo A, Borge C, García-Bocanegra I, Méric G, Perea A, Carbonero A.

Comp Immunol Microbiol Infect Dis. 2015 Apr;39:47-52. doi: 10.1016/j.cimid.2015.02.003. Epub 2015 Mar 6.


Variation in siderophore biosynthetic gene distribution and production across environmental and faecal populations of Escherichia coli.

Searle LJ, Méric G, Porcelli I, Sheppard SK, Lucchini S.

PLoS One. 2015 Mar 10;10(3):e0117906. doi: 10.1371/journal.pone.0117906. eCollection 2015.


The complete type of suprapatellar plica and lipoma arborescens: a case report.

Erduran M, Meriç G, Ulusal AE, Akseki D.

Acta Orthop Traumatol Turc. 2014;48(6):703-6. doi: 10.3944/AOTT.2014.13.0139. Review.


Fresh osteochondral allograft transplantation for isolated patellar cartilage injury.

Gracitelli GC, Meric G, Pulido PA, Görtz S, De Young AJ, Bugbee WD.

Am J Sports Med. 2015 Apr;43(4):879-84. doi: 10.1177/0363546514564144. Epub 2015 Jan 16.


Fresh osteochondral allograft transplantation for bipolar reciprocal osteochondral lesions of the knee.

Meric G, Gracitelli GC, Görtz S, De Young AJ, Bugbee WD.

Am J Sports Med. 2015 Mar;43(3):709-14. doi: 10.1177/0363546514562549. Epub 2015 Jan 8.


Evaluating the efficiency of humic acid to remove micro-organisms from denture base material.

Meriç G, Güvenir M, Süer K.

Gerodontology. 2016 Sep;33(3):395-401. doi: 10.1111/ger.12175. Epub 2014 Dec 19.


Short-term clinical outcomes after first metatarsal head resurfacing hemiarthroplasty for late stage hallux rigidus.

Meriç G, Erduran M, Atik A, Köse Ö, Ulusal AE, Akseki D.

J Foot Ankle Surg. 2015 Mar-Apr;54(2):173-8. doi: 10.1053/j.jfas.2014.10.016. Epub 2014 Dec 6.


Evidence of land-sea transfer of the zoonotic pathogen Campylobacter to a wildlife marine sentinel species.

Baily JL, Méric G, Bayliss S, Foster G, Moss SE, Watson E, Pascoe B, Mikhail J, Pizzi R, Goldstone RJ, Smith DG, Willoughby K, Hall AJ, Sheppard SK, Dagleish MP.

Mol Ecol. 2015 Jan;24(1):208-21. doi: 10.1111/mec.13001. Epub 2014 Dec 31.


Microshear bond strength according to dentin cleansing methods before recementation.

Taşar S, Ulusoy MM, Merıç G.

J Adv Prosthodont. 2014 Apr;6(2):79-87. doi: 10.4047/jap.2014.6.2.79. Epub 2014 Apr 22.


A usual cause of tumoural mass of the index finger.

Atik A, Ozyurek S, Meric G.

BMJ Case Rep. 2014 May 19;2014. pii: bcr2014204248. doi: 10.1136/bcr-2014-204248.


Cryptic ecology among host generalist Campylobacter jejuni in domestic animals.

Sheppard SK, Cheng L, Méric G, de Haan CP, Llarena AK, Marttinen P, Vidal A, Ridley A, Clifton-Hadley F, Connor TR, Strachan NJ, Forbes K, Colles FM, Jolley KA, Bentley SD, Maiden MC, Hänninen ML, Parkhill J, Hanage WP, Corander J.

Mol Ecol. 2014 May;23(10):2442-51. doi: 10.1111/mec.12742. Epub 2014 Apr 25.


A reference pan-genome approach to comparative bacterial genomics: identification of novel epidemiological markers in pathogenic Campylobacter.

Méric G, Yahara K, Mageiros L, Pascoe B, Maiden MC, Jolley KA, Sheppard SK.

PLoS One. 2014 Mar 27;9(3):e92798. doi: 10.1371/journal.pone.0092798. eCollection 2014.

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