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Items: 1 to 50 of 110

1.

Using YFP as a Reporter of Gene Expression in the Green Alga Chlamydomonas reinhardtii.

Blaby-Haas CE, Page MD, Merchant SS.

Methods Mol Biol. 2018;1755:135-148. doi: 10.1007/978-1-4939-7724-6_10.

PMID:
29671268
2.

RAF2 is a RuBisCO assembly factor in Arabidopsis thaliana.

Fristedt R, Hu C, Wheatley N, Roy LM, Wachter RM, Savage L, Harbinson J, Kramer DM, Merchant SS, Yeates T, Croce R.

Plant J. 2018 Apr;94(1):146-156. doi: 10.1111/tpj.13849. Epub 2018 Mar 12.

PMID:
29396988
3.

The Plant Cell Welcomes Assistant Features Editors.

Eckardt NA, Williams M, Merchant SS.

Plant Cell. 2018 Jan;30(1):1-2. doi: 10.1105/tpc.18.00048. Epub 2018 Jan 19. No abstract available.

4.

Thank You, Editors and Reviewers of The Plant Cell.

Eckardt NA, Merchant SS.

Plant Cell. 2017 Dec;29(12):2941-2947. doi: 10.1105/tpc.17.00964. No abstract available.

5.
6.

Bilin-Dependent Photoacclimation in Chlamydomonas reinhardtii.

Wittkopp TM, Schmollinger S, Saroussi S, Hu W, Zhang W, Fan Q, Gallaher SD, Leonard MT, Soubeyrand E, Basset GJ, Merchant SS, Grossman AR, Duanmu D, Lagarias JC.

Plant Cell. 2017 Nov;29(11):2711-2726. doi: 10.1105/tpc.17.00149. Epub 2017 Oct 30.

7.

Journal Impact: Brave New World.

Eckardt NA, Merchant SS.

Plant Cell. 2017 Sep;29(9):2071-2074. doi: 10.1105/tpc.17.00680. Epub 2017 Aug 25. No abstract available.

8.

Chlamydomonas reinhardtii LFO1 Is an IsdG Family Heme Oxygenase.

Lojek LJ, Farrand AJ, Wisecaver JH, Blaby-Haas CE, Michel BW, Merchant SS, Rokas A, Skaar EP.

mSphere. 2017 Aug 16;2(4). pii: e00176-17. doi: 10.1128/mSphere.00176-17. eCollection 2017 Jul-Aug.

9.

Regulating cellular trace metal economy in algae.

Blaby-Haas CE, Merchant SS.

Curr Opin Plant Biol. 2017 Oct;39:88-96. doi: 10.1016/j.pbi.2017.06.005. Epub 2017 Jun 30. Review.

PMID:
28672168
10.

Endoplasmic reticulum-mitochondria junction is required for iron homeostasis.

Xue Y, Schmollinger S, Attar N, Campos OA, Vogelauer M, Carey MF, Merchant SS, Kurdistani SK.

J Biol Chem. 2017 Aug 11;292(32):13197-13204. doi: 10.1074/jbc.M117.784249. Epub 2017 Jun 21.

PMID:
28637866
11.

A bioactive peptide amidating enzyme is required for ciliogenesis.

Kumar D, Strenkert D, Patel-King RS, Leonard MT, Merchant SS, Mains RE, King SM, Eipper BA.

Elife. 2017 May 17;6. pii: e25728. doi: 10.7554/eLife.25728.

12.

Chromosome-level genome assembly and transcriptome of the green alga Chromochloris zofingiensis illuminates astaxanthin production.

Roth MS, Cokus SJ, Gallaher SD, Walter A, Lopez D, Erickson E, Endelman B, Westcott D, Larabell CA, Merchant SS, Pellegrini M, Niyogi KK.

Proc Natl Acad Sci U S A. 2017 May 23;114(21):E4296-E4305. doi: 10.1073/pnas.1619928114. Epub 2017 May 8.

13.

Algae as nutritional and functional food sources: revisiting our understanding.

Wells ML, Potin P, Craigie JS, Raven JA, Merchant SS, Helliwell KE, Smith AG, Camire ME, Brawley SH.

J Appl Phycol. 2017;29(2):949-982. doi: 10.1007/s10811-016-0974-5. Epub 2016 Nov 21. Review.

14.

The Influence of Oblique Angle Forced Exercise in Surgically Destabilized Stifle Joints Is Synergistic with Bone, but Antagonistic with Cartilage in an Ovine Model of Osteoarthritis.

Hill RJ, Mason HM, Yeip G, Merchant SS, Olsen AL, Stott RD, Van Wettere AJ, Bressel E, Mason JB.

Arthritis. 2017;2017:7481619. doi: 10.1155/2017/7481619. Epub 2017 Feb 27.

15.

Genome and methylome of the oleaginous diatom Cyclotella cryptica reveal genetic flexibility toward a high lipid phenotype.

Traller JC, Cokus SJ, Lopez DA, Gaidarenko O, Smith SR, McCrow JP, Gallaher SD, Podell S, Thompson M, Cook O, Morselli M, Jaroszewicz A, Allen EE, Allen AE, Merchant SS, Pellegrini M, Hildebrand M.

Biotechnol Biofuels. 2016 Nov 25;9:258. eCollection 2016.

16.

Genetically Programmed Changes in Photosynthetic Cofactor Metabolism in Copper-deficient Chlamydomonas.

Strenkert D, Limso CA, Fatihi A, Schmollinger S, Basset GJ, Merchant SS.

J Biol Chem. 2016 Sep 2;291(36):19118-31. doi: 10.1074/jbc.M116.717413. Epub 2016 Jul 20.

17.

Micro-Computed Tomography for the Quantitative 3-Dimensional Assessment of the Compact Myocardium in the Mouse Embryo.

Merchant SS, Kosaka Y, Yost HJ, Hsu EW, Brunelli L.

Circ J. 2016 Jul 25;80(8):1795-803. doi: 10.1253/circj.CJ-16-0180. Epub 2016 Jun 15.

18.

Ni induces the CRR1-dependent regulon revealing overlap and distinction between hypoxia and Cu deficiency responses in Chlamydomonas reinhardtii.

Blaby-Haas CE, Castruita M, Fitz-Gibbon ST, Kropat J, Merchant SS.

Metallomics. 2016 Jul 13;8(7):679-91. doi: 10.1039/c6mt00063k.

19.

Parametric Modeling of the Mouse Left Ventricular Myocardial Fiber Structure.

Merchant SS, Gomez AD, Morgan JL, Hsu EW.

Ann Biomed Eng. 2016 Sep;44(9):2661-73. doi: 10.1007/s10439-016-1574-x. Epub 2016 Mar 4.

PMID:
26942586
20.

Early eukaryotic origins for cilia-associated bioactive peptide-amidating activity.

Kumar D, Blaby-Haas CE, Merchant SS, Mains RE, King SM, Eipper BA.

J Cell Sci. 2016 Mar 1;129(5):943-56. doi: 10.1242/jcs.177410. Epub 2016 Jan 19.

21.

Manipulation of Ovarian Function Significantly Influenced Trabecular and Cortical Bone Volume, Architecture and Density in Mice at Death.

Mason JB, Terry BC, Merchant SS, Mason HM, Nazokkarmaher M.

PLoS One. 2015 Dec 30;10(12):e0145821. doi: 10.1371/journal.pone.0145821. eCollection 2015.

22.

Critical role of Chlamydomonas reinhardtii ferredoxin-5 in maintaining membrane structure and dark metabolism.

Yang W, Wittkopp TM, Li X, Warakanont J, Dubini A, Catalanotti C, Kim RG, Nowack EC, Mackinder LC, Aksoy M, Page MD, D'Adamo S, Saroussi S, Heinnickel M, Johnson X, Richaud P, Alric J, Boehm M, Jonikas MC, Benning C, Merchant SS, Posewitz MC, Grossman AR.

Proc Natl Acad Sci U S A. 2015 Dec 1;112(48):14978-83. doi: 10.1073/pnas.1515240112. Epub 2015 Nov 16.

23.

Genome-wide analysis on Chlamydomonas reinhardtii reveals the impact of hydrogen peroxide on protein stress responses and overlap with other stress transcriptomes.

Blaby IK, Blaby-Haas CE, Pérez-Pérez ME, Schmollinger S, Fitz-Gibbon S, Lemaire SD, Merchant SS.

Plant J. 2015 Dec;84(5):974-988. doi: 10.1111/tpj.13053.

24.

Dynamic Changes in the Transcriptome and Methylome of Chlamydomonas reinhardtii throughout Its Life Cycle.

Lopez D, Hamaji T, Kropat J, De Hoff P, Morselli M, Rubbi L, Fitz-Gibbon S, Gallaher SD, Merchant SS, Umen J, Pellegrini M.

Plant Physiol. 2015 Dec;169(4):2730-43. doi: 10.1104/pp.15.00861. Epub 2015 Oct 8.

25.

High-Resolution Profiling of a Synchronized Diurnal Transcriptome from Chlamydomonas reinhardtii Reveals Continuous Cell and Metabolic Differentiation.

Zones JM, Blaby IK, Merchant SS, Umen JG.

Plant Cell. 2015 Oct;27(10):2743-69. doi: 10.1105/tpc.15.00498. Epub 2015 Oct 2.

26.

Dissecting the contributions of GC content and codon usage to gene expression in the model alga Chlamydomonas reinhardtii.

Barahimipour R, Strenkert D, Neupert J, Schroda M, Merchant SS, Bock R.

Plant J. 2015 Nov;84(4):704-17. doi: 10.1111/tpj.13033. Epub 2015 Oct 16.

27.

Copper status of exposed microorganisms influences susceptibility to metallic nanoparticles.

Reyes VC, Spitzmiller MR, Hong-Hermesdorf A, Kropat J, Damoiseaux RD, Merchant SS, Mahendra S.

Environ Toxicol Chem. 2016 May;35(5):1148-58. doi: 10.1002/etc.3254. Epub 2016 Mar 9.

28.

Chlamydomonas Genome Resource for Laboratory Strains Reveals a Mosaic of Sequence Variation, Identifies True Strain Histories, and Enables Strain-Specific Studies.

Gallaher SD, Fitz-Gibbon ST, Glaesener AG, Pellegrini M, Merchant SS.

Plant Cell. 2015 Sep;27(9):2335-52. doi: 10.1105/tpc.15.00508. Epub 2015 Aug 25.

29.

Activation of Autophagy by Metals in Chlamydomonas reinhardtii.

Pérez-Martín M, Blaby-Haas CE, Pérez-Pérez ME, Andrés-Garrido A, Blaby IK, Merchant SS, Crespo JL.

Eukaryot Cell. 2015 Sep;14(9):964-73. doi: 10.1128/EC.00081-15. Epub 2015 Jul 10.

30.

Redesigning photosynthesis to sustainably meet global food and bioenergy demand.

Ort DR, Merchant SS, Alric J, Barkan A, Blankenship RE, Bock R, Croce R, Hanson MR, Hibberd JM, Long SP, Moore TA, Moroney J, Niyogi KK, Parry MA, Peralta-Yahya PP, Prince RC, Redding KE, Spalding MH, van Wijk KJ, Vermaas WF, von Caemmerer S, Weber AP, Yeates TO, Yuan JS, Zhu XG.

Proc Natl Acad Sci U S A. 2015 Jul 14;112(28):8529-36. doi: 10.1073/pnas.1424031112. Epub 2015 Jun 29.

31.

A Dedicated Type II NADPH Dehydrogenase Performs the Penultimate Step in the Biosynthesis of Vitamin K1 in Synechocystis and Arabidopsis.

Fatihi A, Latimer S, Schmollinger S, Block A, Dussault PH, Vermaas WF, Merchant SS, Basset GJ.

Plant Cell. 2015 Jun;27(6):1730-41. doi: 10.1105/tpc.15.00103. Epub 2015 May 28.

32.

Kinetics and Products of Vinyl + 1,3-Butadiene, a Potential Route to Benzene.

Buras ZJ, Dames EE, Merchant SS, Liu G, Elsamra RM, Green WH.

J Phys Chem A. 2015 Jul 16;119(28):7325-38. doi: 10.1021/jp512705r. Epub 2015 May 12.

PMID:
25919855
33.

The thylakoid membrane protein CGL160 supports CF1CF0 ATP synthase accumulation in Arabidopsis thaliana.

Fristedt R, Martins NF, Strenkert D, Clarke CA, Suchoszek M, Thiele W, Schöttler MA, Merchant SS.

PLoS One. 2015 Apr 2;10(4):e0121658. doi: 10.1371/journal.pone.0121658. eCollection 2015.

34.

Subcellular metal imaging identifies dynamic sites of Cu accumulation in Chlamydomonas.

Hong-Hermesdorf A, Miethke M, Gallaher SD, Kropat J, Dodani SC, Chan J, Barupala D, Domaille DW, Shirasaki DI, Loo JA, Weber PK, Pett-Ridge J, Stemmler TL, Chang CJ, Merchant SS.

Nat Chem Biol. 2015 Mar;11(3):235. doi: 10.1038/nchembio0315-235c. No abstract available.

PMID:
25689337
35.

Copper economy in Chlamydomonas: prioritized allocation and reallocation of copper to respiration vs. photosynthesis.

Kropat J, Gallaher SD, Urzica EI, Nakamoto SS, Strenkert D, Tottey S, Mason AZ, Merchant SS.

Proc Natl Acad Sci U S A. 2015 Mar 3;112(9):2644-51. doi: 10.1073/pnas.1422492112. Epub 2015 Feb 2.

36.

Exploiting algal NADPH oxidase for biophotovoltaic energy.

Anderson A, Laohavisit A, Blaby IK, Bombelli P, Howe CJ, Merchant SS, Davies JM, Smith AG.

Plant Biotechnol J. 2016 Jan;14(1):22-8. doi: 10.1111/pbi.12332. Epub 2015 Jan 29.

37.

Identification of Coq11, a new coenzyme Q biosynthetic protein in the CoQ-synthome in Saccharomyces cerevisiae.

Allan CM, Awad AM, Johnson JS, Shirasaki DI, Wang C, Blaby-Haas CE, Merchant SS, Loo JA, Clarke CF.

J Biol Chem. 2015 Mar 20;290(12):7517-34. doi: 10.1074/jbc.M114.633131. Epub 2015 Jan 28.

38.

PHOTOSYSTEM II PROTEIN33, a protein conserved in the plastid lineage, is associated with the chloroplast thylakoid membrane and provides stability to photosystem II supercomplexes in Arabidopsis.

Fristedt R, Herdean A, Blaby-Haas CE, Mamedov F, Merchant SS, Last RL, Lundin B.

Plant Physiol. 2015 Feb;167(2):481-92. doi: 10.1104/pp.114.253336. Epub 2014 Dec 15. Erratum in: Plant Physiol. 2017 Apr;173(4):2411.

39.

Evolution of a plant-specific copper chaperone family for chloroplast copper homeostasis.

Blaby-Haas CE, Padilla-Benavides T, Stübe R, Argüello JM, Merchant SS.

Proc Natl Acad Sci U S A. 2014 Dec 16;111(50):E5480-7. doi: 10.1073/pnas.1421545111. Epub 2014 Dec 2.

40.

Subcellular metal imaging identifies dynamic sites of Cu accumulation in Chlamydomonas.

Hong-Hermesdorf A, Miethke M, Gallaher SD, Kropat J, Dodani SC, Chan J, Barupala D, Domaille DW, Shirasaki DI, Loo JA, Weber PK, Pett-Ridge J, Stemmler TL, Chang CJ, Merchant SS.

Nat Chem Biol. 2014 Dec;10(12):1034-42. doi: 10.1038/nchembio.1662. Epub 2014 Oct 26. Erratum in: Nat Chem Biol. 2015 Mar;11(3):235.

41.

A thylakoid membrane protein harboring a DnaJ-type zinc finger domain is required for photosystem I accumulation in plants.

Fristedt R, Williams-Carrier R, Merchant SS, Barkan A.

J Biol Chem. 2014 Oct 31;289(44):30657-67. doi: 10.1074/jbc.M114.587758. Epub 2014 Sep 16.

42.

Lysosome-related organelles as mediators of metal homeostasis.

Blaby-Haas CE, Merchant SS.

J Biol Chem. 2014 Oct 10;289(41):28129-36. doi: 10.1074/jbc.R114.592618. Epub 2014 Aug 26. Review.

43.

The Chlamydomonas genome project: a decade on.

Blaby IK, Blaby-Haas CE, Tourasse N, Hom EF, Lopez D, Aksoy M, Grossman A, Umen J, Dutcher S, Porter M, King S, Witman GB, Stanke M, Harris EH, Goodstein D, Grimwood J, Schmutz J, Vallon O, Merchant SS, Prochnik S.

Trends Plant Sci. 2014 Oct;19(10):672-80. doi: 10.1016/j.tplants.2014.05.008. Epub 2014 Jun 17. Review.

44.

Phosphoprotein SAK1 is a regulator of acclimation to singlet oxygen in Chlamydomonas reinhardtii.

Wakao S, Chin BL, Ledford HK, Dent RM, Casero D, Pellegrini M, Merchant SS, Niyogi KK.

Elife. 2014 May 23;3:e02286. doi: 10.7554/eLife.02286.

45.

Accurate high-resolution measurements of 3-D tissue dynamics with registration-enhanced displacement encoded MRI.

Gomez AD, Merchant SS, Hsu EW.

IEEE Trans Med Imaging. 2014 Jun;33(6):1350-62. doi: 10.1109/TMI.2014.2311755. Epub 2014 Mar 14.

46.

Nitrogen-Sparing Mechanisms in Chlamydomonas Affect the Transcriptome, the Proteome, and Photosynthetic Metabolism.

Schmollinger S, Mühlhaus T, Boyle NR, Blaby IK, Casero D, Mettler T, Moseley JL, Kropat J, Sommer F, Strenkert D, Hemme D, Pellegrini M, Grossman AR, Stitt M, Schroda M, Merchant SS.

Plant Cell. 2014 Apr;26(4):1410-1435. Epub 2014 Apr 18.

47.

The path to triacylglyceride obesity in the sta6 strain of Chlamydomonas reinhardtii.

Goodenough U, Blaby I, Casero D, Gallaher SD, Goodson C, Johnson S, Lee JH, Merchant SS, Pellegrini M, Roth R, Rusch J, Singh M, Umen JG, Weiss TL, Wulan T.

Eukaryot Cell. 2014 May;13(5):591-613. doi: 10.1128/EC.00013-14. Epub 2014 Feb 28.

48.

Systems-level analysis of nitrogen starvation-induced modifications of carbon metabolism in a Chlamydomonas reinhardtii starchless mutant.

Blaby IK, Glaesener AG, Mettler T, Fitz-Gibbon ST, Gallaher SD, Liu B, Boyle NR, Kropat J, Stitt M, Johnson S, Benning C, Pellegrini M, Casero D, Merchant SS.

Plant Cell. 2013 Nov;25(11):4305-23. doi: 10.1105/tpc.113.117580. Epub 2013 Nov 26.

49.

RBF1, a plant homolog of the bacterial ribosome-binding factor RbfA, acts in processing of the chloroplast 16S ribosomal RNA.

Fristedt R, Scharff LB, Clarke CA, Wang Q, Lin C, Merchant SS, Bock R.

Plant Physiol. 2014 Jan;164(1):201-15. doi: 10.1104/pp.113.228338. Epub 2013 Nov 8. Erratum in: Plant Physiol. 2015 Oct;169(2):1419.

50.

Iron economy in Chlamydomonas reinhardtii.

Glaesener AG, Merchant SS, Blaby-Haas CE.

Front Plant Sci. 2013 Sep 2;4:337. doi: 10.3389/fpls.2013.00337. Review.

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