Format
Sort by
Items per page

Send to

Choose Destination

Search results

Items: 1 to 50 of 70

1.

AllSome Sequence Bloom Trees.

Sun C, Harris RS, Chikhi R, Medvedev P.

J Comput Biol. 2018 May;25(5):467-479. doi: 10.1089/cmb.2017.0258. Epub 2018 Apr 5.

PMID:
29620920
2.

Two-billion-year-old evaporites capture Earth's great oxidation.

Blättler CL, Claire MW, Prave AR, Kirsimäe K, Higgins JA, Medvedev PV, Romashkin AE, Rychanchik DV, Zerkle AL, Paiste K, Kreitsmann T, Millar IL, Hayles JA, Bao H, Turchyn AV, Warke MR, Lepland A.

Science. 2018 Apr 20;360(6386):320-323. doi: 10.1126/science.aar2687. Epub 2018 Mar 22.

PMID:
29567810
3.

Global Variation in Use of Enteral Nutrition for Pediatric Crohn Disease.

Lawley M, Wu JW, Navas-López VM, Huynh HQ, Carroll MW, Chen M, Medvedev P, Day AS, Hussey S, Sigall-Boneh R, Levine A, Wine E.

J Pediatr Gastroenterol Nutr. 2018 Mar 14. doi: 10.1097/MPG.0000000000001946. [Epub ahead of print]

PMID:
29543696
4.

Modeling biological problems in computer science: a case study in genome assembly.

Medvedev P.

Brief Bioinform. 2018 Jan 30. doi: 10.1093/bib/bby003. [Epub ahead of print]

PMID:
29394324
5.

Vitamin D status and risk for sarcopenia in youth with inflammatory bowel diseases.

Mager DR, Carroll MW, Wine E, Siminoski K, MacDonald K, Kluthe CL, Medvedev P, Chen M, Wu J, Turner JM, Huynh HQ.

Eur J Clin Nutr. 2018 Apr;72(4):623-626. doi: 10.1038/s41430-018-0105-2. Epub 2018 Feb 1.

PMID:
29391593
6.

RecoverY: k-mer-based read classification for Y-chromosome-specific sequencing and assembly.

Rangavittal S, Harris RS, Cechova M, Tomaszkiewicz M, Chikhi R, Makova KD, Medvedev P.

Bioinformatics. 2018 Apr 1;34(7):1125-1131. doi: 10.1093/bioinformatics/btx771.

PMID:
29194476
7.

[Diagnostic Possibilities of Speckle-Tracking Echocardiography].

Medvedev PI, Alekhin MN, Sidorenko BA.

Kardiologiia. 2016 Feb;56(2):79-84. Review. Russian.

PMID:
28294755
8.

Y and W Chromosome Assemblies: Approaches and Discoveries.

Tomaszkiewicz M, Medvedev P, Makova KD.

Trends Genet. 2017 Apr;33(4):266-282. doi: 10.1016/j.tig.2017.01.008. Epub 2017 Feb 22. Review.

PMID:
28236503
9.

VarMatch: robust matching of small variant datasets using flexible scoring schemes.

Sun C, Medvedev P.

Bioinformatics. 2017 May 1;33(9):1301-1308. doi: 10.1093/bioinformatics/btw797.

PMID:
28011786
10.

Safe and Complete Contig Assembly Through Omnitigs.

Tomescu AI, Medvedev P.

J Comput Biol. 2017 Jun;24(6):590-602. doi: 10.1089/cmb.2016.0141. Epub 2016 Oct 17.

PMID:
27749096
11.

TwoPaCo: an efficient algorithm to build the compacted de Bruijn graph from many complete genomes.

Minkin I, Pham S, Medvedev P.

Bioinformatics. 2017 Dec 15;33(24):4024-4032. doi: 10.1093/bioinformatics/btw609.

PMID:
27659452
12.

Compacting de Bruijn graphs from sequencing data quickly and in low memory.

Chikhi R, Limasset A, Medvedev P.

Bioinformatics. 2016 Jun 15;32(12):i201-i208. doi: 10.1093/bioinformatics/btw279.

13.

Giraffe genome sequence reveals clues to its unique morphology and physiology.

Agaba M, Ishengoma E, Miller WC, McGrath BC, Hudson CN, Bedoya Reina OC, Ratan A, Burhans R, Chikhi R, Medvedev P, Praul CA, Wu-Cavener L, Wood B, Robertson H, Penfold L, Cavener DR.

Nat Commun. 2016 May 17;7:11519. doi: 10.1038/ncomms11519.

14.

A time- and cost-effective strategy to sequence mammalian Y Chromosomes: an application to the de novo assembly of gorilla Y.

Tomaszkiewicz M, Rangavittal S, Cechova M, Campos Sanchez R, Fescemyer HW, Harris R, Ye D, O'Brien PC, Chikhi R, Ryder OA, Ferguson-Smith MA, Medvedev P, Makova KD.

Genome Res. 2016 Apr;26(4):530-40. doi: 10.1101/gr.199448.115. Epub 2016 Mar 2.

15.

[Application of CAVI Index in Clinical Practice: Calculated Vascular Age as a Tool for Decision on Additional Examination of Patients With Cardiovascular Diseases].

Gaisenok OV, Medvedev PA, Trifonova SS, Shatalova IV, Martsevich SY, Sidorenko BA.

Kardiologiia. 2015;55(7):51-6. Russian.

PMID:
26688926
16.

Improving the Power of Structural Variation Detection by Augmenting the Reference.

Schröder J, Girirajan S, Papenfuss AT, Medvedev P.

PLoS One. 2015 Aug 31;10(8):e0136771. doi: 10.1371/journal.pone.0136771. eCollection 2015.

17.

Accurate typing of short tandem repeats from genome-wide sequencing data and its applications.

Fungtammasan A, Ananda G, Hile SE, Su MS, Sun C, Harris R, Medvedev P, Eckert K, Makova KD.

Genome Res. 2015 May;25(5):736-49. doi: 10.1101/gr.185892.114. Epub 2015 Mar 30.

18.

On the representation of de Bruijn graphs.

Chikhi R, Limasset A, Jackman S, Simpson JT, Medvedev P.

J Comput Biol. 2015 May;22(5):336-52. doi: 10.1089/cmb.2014.0160. Epub 2015 Jan 28.

PMID:
25629448
19.

A combinatorial approach to the design of vaccines.

Martínez L, Milanič M, Legarreta L, Medvedev P, Malaina I, de la Fuente IM.

J Math Biol. 2015 May;70(6):1327-58. doi: 10.1007/s00285-014-0797-4. Epub 2014 May 25.

PMID:
24859149
20.

Immunogenicity of quadrivalent human papillomavirus vaccine in organ transplant recipients.

Kumar D, Unger ER, Panicker G, Medvedev P, Wilson L, Humar A.

Am J Transplant. 2013 Sep;13(9):2411-7. doi: 10.1111/ajt.12329. Epub 2013 Jul 9.

21.

Using state machines to model the Ion Torrent sequencing process and to improve read error rates.

Golan D, Medvedev P.

Bioinformatics. 2013 Jul 1;29(13):i344-51. doi: 10.1093/bioinformatics/btt212.

22.

Informed and automated k-mer size selection for genome assembly.

Chikhi R, Medvedev P.

Bioinformatics. 2014 Jan 1;30(1):31-7. doi: 10.1093/bioinformatics/btt310. Epub 2013 Jun 3.

PMID:
23732276
23.

Reprever: resolving low-copy duplicated sequences using template driven assembly.

Kim S, Medvedev P, Paton TA, Bafna V.

Nucleic Acids Res. 2013 Jul;41(12):e128. doi: 10.1093/nar/gkt339. Epub 2013 May 8.

24.

Paired de bruijn graphs: a novel approach for incorporating mate pair information into genome assemblers.

Medvedev P, Pham S, Chaisson M, Tesler G, Pevzner P.

J Comput Biol. 2011 Nov;18(11):1625-34. doi: 10.1089/cmb.2011.0151. Epub 2011 Oct 14.

25.

Error correction of high-throughput sequencing datasets with non-uniform coverage.

Medvedev P, Scott E, Kakaradov B, Pevzner P.

Bioinformatics. 2011 Jul 1;27(13):i137-41. doi: 10.1093/bioinformatics/btr208.

26.

Rearrangement models and single-cut operations.

Bergeron A, Medvedev P, Stoye J.

J Comput Biol. 2010 Sep;17(9):1213-25. doi: 10.1089/cmb.2010.0091.

PMID:
20874405
27.

Detecting copy number variation with mated short reads.

Medvedev P, Fiume M, Dzamba M, Smith T, Brudno M.

Genome Res. 2010 Nov;20(11):1613-22. doi: 10.1101/gr.106344.110. Epub 2010 Aug 30.

28.

Computational methods for discovering structural variation with next-generation sequencing.

Medvedev P, Stanciu M, Brudno M.

Nat Methods. 2009 Nov;6(11 Suppl):S13-20. doi: 10.1038/nmeth.1374. Review.

PMID:
19844226
29.

A report on the 2009 SIG on short read sequencing and algorithms (Short-SIG).

Brudno M, Medvedev P, Stoye J, De La Vega FM.

Bioinformatics. 2009 Nov 1;25(21):2863-4. doi: 10.1093/bioinformatics/btp525. Epub 2009 Sep 24. No abstract available.

PMID:
19783529
30.

Maximum likelihood genome assembly.

Medvedev P, Brudno M.

J Comput Biol. 2009 Aug;16(8):1101-16. doi: 10.1089/cmb.2009.0047.

31.

Doxorubicin pharmacokinetics in lymphoma patients treated with doxorubicin-loaded eythrocytes.

Skorokhod O, Kulikova EV, Galkina NM, Medvedev PV, Zybunova EE, Vitvitsky VM, Pivnik AV, Ataullakhanov FI.

Haematologica. 2007 Apr;92(4):570-1.

32.
33.

[The therapeutic efficacy and toxicity of the liposomal form of daunorubicin (Daunoxome) in lymphosarcoma patients].

Medvedev PV, Nikitin EA, Pivnik AV.

Ter Arkh. 2000;72(7):38-42. Russian.

PMID:
10983319
34.

[Liposomal daunorubicin (daunosom) in the treatment of recurrent acute promyelocytic leukemia].

Pivnik AV, Shtroiakovskiĭ DL, Medvedev PV, Moiseeva TN, Shklovskiĭ-Kordi NE, Skorokhod AA.

Ter Arkh. 1999;71(7):24-7. Russian. No abstract available.

PMID:
10481863
35.

[The immune system and factors of natural resistance in patients with cancer of the stomach].

Zyrianov BN, Vasil'ev NV, Smol'ianinov ES, Tikhonov VI, Medvedev PS.

Vopr Onkol. 1987;33(11):23-9. Russian.

PMID:
3500538
36.

[Assessment of the morphofunctional health indices of pupils in general education boarding schools].

Berenshteĭn GF, Karavaev AG, Nurbaeva MN, Medvedev PA.

Gig Sanit. 1985 Oct;(10):88-9. Russian. No abstract available.

PMID:
2935455
37.

[Evaluation of the educational achievement and physical development of rural schoolchildren].

Berenshteĭn GF, Nurbaeva MN, Medvedev PA, Karavaev AG.

Gig Sanit. 1984 Oct;(10):72-3. Russian. No abstract available.

PMID:
6519470
38.

[Various morphofunctional indicators in 4th-8th grade schoolchildren in Vitebsk during school year].

Berenshteĭn GF, Nurbaeva MN, Karavaev AG, Medvedev PA.

Gig Sanit. 1984 Aug;(8):87-8. Russian. No abstract available.

PMID:
6237959
39.

[Circulatory system function in rural schoolchildren in the process of adapting to the school load].

Berenshteĭn GF, Karavaev AG, Nurbaeva MN, Medvedev PA.

Gig Sanit. 1983 Aug;(8):89. Review. Russian. No abstract available.

PMID:
6226566
40.

[Physical development of preschoolers in Vitebsk].

Karavaev AG, Medvedev PA, Berenshteĭn GF, Nurbaeva MN, Karavaeva GS.

Gig Sanit. 1983 Jul;(7):89-90. Russian. No abstract available.

PMID:
6225710
41.

[Age-related dynamics of physiometric indices of the physical development in rural schoolchildren].

Berenshteĭn GF, Karavaev AG, Medvedev PA, Nurbaeva MN.

Gig Sanit. 1982 Nov;(11):82. Russian. No abstract available.

PMID:
6218020
42.

[Use of the radiochemical methods for evaluation of viability of bone marrow cells].

Kiselev BN, Medvedev PM, Rakov AA, Andreeva NE.

Probl Gematol Pereliv Krovi. 1977 Oct;22(10):58-60. Russian. No abstract available.

PMID:
605114
43.

[Dynamics of formation of the fibroblast-like cells in the monolayer culture of cadaveric (postmortem) bone marrow].

Moshkin SA, Medvedev PM.

Probl Gematol Pereliv Krovi. 1976 May;21(5):39-42. Russian. No abstract available.

PMID:
1024214
44.

[Transporting bone marrow preserved by freezing].

Kholodnyĭ AIa, Medvedev PM, Kargin VD, Mamysheva TK, Bagautdinov ShM.

Voen Med Zh. 1976 Mar;(3):23-7. Russian. No abstract available.

PMID:
1274206
45.

[Water structure in the cell (literature survey)].

Medvedev PM, Fisanovich TI.

Probl Gematol Pereliv Krovi. 1975 Apr;20(4):38-43. Review. Russian. No abstract available.

PMID:
778828
46.

[Study of cryoprotective action of gelatin and gelatinol].

Medvedev PM, Fisanovich TI.

Probl Gematol Pereliv Krovi. 1973 Dec;18(12):27-30. Russian. No abstract available.

PMID:
4789367
47.

[Study of thermograms of cooling and thawing of cadaveric bone marrow during cryopreservation].

Medvedev PM, Fisanovich TI, Nedel'skiĭ GT.

Probl Gematol Pereliv Krovi. 1973 Dec;18(12):21-4. Russian. No abstract available.

PMID:
4789366
48.

[Traumatization of blood cells and bone marrow during deep cooling].

Medvedev PM, Fisanovich TI.

Tsitologiia. 1973 Feb;15(2):129-43. Review. Russian. No abstract available.

PMID:
4586908
49.

[Role of cryoprotectors as stabilizers of water in biological media].

Medvedev PM, Fisanovich TI.

Usp Sovrem Biol. 1973 Jan-Feb;75(1):46-60. Review. Russian. No abstract available.

PMID:
4575503
50.

[Principles for conserving tissues and organs for transplantation purposes].

Medvedev PM.

Khirurgiia (Mosk). 1972 Aug;48(8):46-51. Russian. No abstract available.

PMID:
4664765

Supplemental Content

Loading ...
Support Center