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Items: 23

1.

Extreme Mitogenomic Variation in Natural Populations of Chaetognaths.

Marlétaz F, Le Parco Y, Liu S, Peijnenburg KTCA.

Genome Biol Evol. 2017 Jun 1;9(6):1374-1384. doi: 10.1093/gbe/evx090.

2.

Genome sequence of a diabetes-prone rodent reveals a mutation hotspot around the ParaHox gene cluster.

Hargreaves AD, Zhou L, Christensen J, Marlétaz F, Liu S, Li F, Jansen PG, Spiga E, Hansen MT, Pedersen SVH, Biswas S, Serikawa K, Fox BA, Taylor WR, Mulley JF, Zhang G, Heller RS, Holland PWH.

Proc Natl Acad Sci U S A. 2017 Jul 18;114(29):7677-7682. doi: 10.1073/pnas.1702930114. Epub 2017 Jul 3.

3.

Time-calibrated molecular phylogeny of pteropods.

Burridge AK, Hörnlein C, Janssen AW, Hughes M, Bush SL, Marlétaz F, Gasca R, Pierrot-Bults AC, Michel E, Todd JA, Young JR, Osborn KJ, Menken SBJ, Peijnenburg KTCA.

PLoS One. 2017 Jun 12;12(6):e0177325. doi: 10.1371/journal.pone.0177325. eCollection 2017.

4.

New genes from old: asymmetric divergence of gene duplicates and the evolution of development.

Holland PW, Marlétaz F, Maeso I, Dunwell TL, Paps J.

Philos Trans R Soc Lond B Biol Sci. 2017 Feb 5;372(1713). pii: 20150480. Review.

5.

Evolutionary origin and functional divergence of totipotent cell homeobox genes in eutherian mammals.

Maeso I, Dunwell TL, Wyatt CD, Marlétaz F, Vető B, Bernal JA, Quah S, Irimia M, Holland PW.

BMC Biol. 2016 Jun 13;14:45. doi: 10.1186/s12915-016-0267-0.

6.

Conservation, Duplication, and Divergence of Five Opsin Genes in Insect Evolution.

Feuda R, Marlétaz F, Bentley MA, Holland PW.

Genome Biol Evol. 2016 Feb 9;8(3):579-87. doi: 10.1093/gbe/evw015.

7.

A single three-dimensional chromatin compartment in amphioxus indicates a stepwise evolution of vertebrate Hox bimodal regulation.

Acemel RD, Tena JJ, Irastorza-Azcarate I, Marlétaz F, Gómez-Marín C, de la Calle-Mustienes E, Bertrand S, Diaz SG, Aldea D, Aury JM, Mangenot S, Holland PW, Devos DP, Maeso I, Escrivá H, Gómez-Skarmeta JL.

Nat Genet. 2016 Mar;48(3):336-41. doi: 10.1038/ng.3497. Epub 2016 Feb 1.

PMID:
26829752
8.

Hemichordate genomes and deuterostome origins.

Simakov O, Kawashima T, Marlétaz F, Jenkins J, Koyanagi R, Mitros T, Hisata K, Bredeson J, Shoguchi E, Gyoja F, Yue JX, Chen YC, Freeman RM Jr, Sasaki A, Hikosaka-Katayama T, Sato A, Fujie M, Baughman KW, Levine J, Gonzalez P, Cameron C, Fritzenwanker JH, Pani AM, Goto H, Kanda M, Arakaki N, Yamasaki S, Qu J, Cree A, Ding Y, Dinh HH, Dugan S, Holder M, Jhangiani SN, Kovar CL, Lee SL, Lewis LR, Morton D, Nazareth LV, Okwuonu G, Santibanez J, Chen R, Richards S, Muzny DM, Gillis A, Peshkin L, Wu M, Humphreys T, Su YH, Putnam NH, Schmutz J, Fujiyama A, Yu JK, Tagawa K, Worley KC, Gibbs RA, Kirschner MW, Lowe CJ, Satoh N, Rokhsar DS, Gerhart J.

Nature. 2015 Nov 26;527(7579):459-65. doi: 10.1038/nature16150. Epub 2015 Nov 18.

9.

Draft genome assemblies and predicted microRNA complements of the intertidal lophotrochozoans Patella vulgata (Mollusca, Patellogastropoda) and Spirobranchus (Pomatoceros) lamarcki (Annelida, Serpulida).

Kenny NJ, Namigai EK, Marlétaz F, Hui JH, Shimeld SM.

Mar Genomics. 2015 Dec;24 Pt 2:139-46. doi: 10.1016/j.margen.2015.07.004. Epub 2015 Aug 28.

PMID:
26319627
10.

Cdx ParaHox genes acquired distinct developmental roles after gene duplication in vertebrate evolution.

Marlétaz F, Maeso I, Faas L, Isaacs HV, Holland PW.

BMC Biol. 2015 Aug 1;13:56. doi: 10.1186/s12915-015-0165-x.

11.

Ancient expansion of the hox cluster in lepidoptera generated four homeobox genes implicated in extra-embryonic tissue formation.

Ferguson L, Marlétaz F, Carter JM, Taylor WR, Gibbs M, Breuker CJ, Holland PW.

PLoS Genet. 2014 Oct 23;10(10):e1004698. doi: 10.1371/journal.pgen.1004698. eCollection 2014 Oct.

12.

Discovery and classification of homeobox genes in animal genomes.

Marlétaz F, Paps J, Maeso I, Holland PW.

Methods Mol Biol. 2014;1196:3-18. doi: 10.1007/978-1-4939-1242-1_1.

PMID:
25151154
13.

Insights into bilaterian evolution from three spiralian genomes.

Simakov O, Marletaz F, Cho SJ, Edsinger-Gonzales E, Havlak P, Hellsten U, Kuo DH, Larsson T, Lv J, Arendt D, Savage R, Osoegawa K, de Jong P, Grimwood J, Chapman JA, Shapiro H, Aerts A, Otillar RP, Terry AY, Boore JL, Grigoriev IV, Lindberg DR, Seaver EC, Weisblat DA, Putnam NH, Rokhsar DS.

Nature. 2013 Jan 24;493(7433):526-31. doi: 10.1038/nature11696. Epub 2012 Dec 19.

14.

Erratum: Multigene phylogeny of the green lineage reveals the origin and diversification of land plants.

Finet C, Timme RE, Delwiche CF, Marletaz F.

Curr Biol. 2012 Aug 7;22(15):1456-7. No abstract available.

15.

Evolution of the ARF gene family in land plants: old domains, new tricks.

Finet C, Berne-Dedieu A, Scutt CP, Marlétaz F.

Mol Biol Evol. 2013 Jan;30(1):45-56. doi: 10.1093/molbev/mss220. Epub 2012 Sep 12.

PMID:
22977118
16.

Structural shifts of aldehyde dehydrogenase enzymes were instrumental for the early evolution of retinoid-dependent axial patterning in metazoans.

Sobreira TJ, Marlétaz F, Simões-Costa M, Schechtman D, Pereira AC, Brunet F, Sweeney S, Pani A, Aronowicz J, Lowe CJ, Davidson B, Laudet V, Bronner M, de Oliveira PS, Schubert M, Xavier-Neto J.

Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):226-31. doi: 10.1073/pnas.1011223108. Epub 2010 Dec 17.

17.

Multigene phylogeny of the green lineage reveals the origin and diversification of land plants.

Finet C, Timme RE, Delwiche CF, Marlétaz F.

Curr Biol. 2010 Dec 21;20(24):2217-22. doi: 10.1016/j.cub.2010.11.035. Epub 2010 Dec 9. Erratum in: Curr Biol. 2012 Aug 7;22(15):1456-7.

18.

High level of structural polymorphism driven by mobile elements in the Hox genomic region of the Chaetognath Spadella cephaloptera.

Marlétaz F, Gyapay G, Le Parco Y.

Genome Biol Evol. 2010;2:665-77. doi: 10.1093/gbe/evq047. Epub 2010 Aug 1.

19.

Retinoic acid signaling in development: tissue-specific functions and evolutionary origins.

Campo-Paysaa F, Marlétaz F, Laudet V, Schubert M.

Genesis. 2008 Nov;46(11):640-56. doi: 10.1002/dvg.20444. Review.

PMID:
19003929
20.

Careful with understudied phyla: the case of chaetognath.

Marlétaz F, Le Parco Y.

BMC Evol Biol. 2008 Sep 17;8:251. doi: 10.1186/1471-2148-8-251.

21.

Chaetognath transcriptome reveals ancestral and unique features among bilaterians.

Marlétaz F, Gilles A, Caubit X, Perez Y, Dossat C, Samain S, Gyapay G, Wincker P, Le Parco Y.

Genome Biol. 2008;9(6):R94. doi: 10.1186/gb-2008-9-6-r94. Epub 2008 Jun 4.

22.

Chaetognath phylogenomics: a protostome with deuterostome-like development.

Marlétaz F, Martin E, Perez Y, Papillon D, Caubit X, Lowe CJ, Freeman B, Fasano L, Dossat C, Wincker P, Weissenbach J, Le Parco Y.

Curr Biol. 2006 Aug 8;16(15):R577-8. No abstract available.

23.

Retinoic acid signaling and the evolution of chordates.

Marlétaz F, Holland LZ, Laudet V, Schubert M.

Int J Biol Sci. 2006;2(2):38-47. Epub 2006 Apr 10. Review.

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