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Items: 14


Intergenic disease-associated regions are abundant in novel transcripts.

Bartonicek N, Clark MB, Quek XC, Torpy JR, Pritchard AL, Maag JLV, Gloss BS, Crawford J, Taft RJ, Hayward NK, Montgomery GW, Mattick JS, Mercer TR, Dinger ME.

Genome Biol. 2017 Dec 28;18(1):241. doi: 10.1186/s13059-017-1363-3.


CCR6 Defines Memory B Cell Precursors in Mouse and Human Germinal Centers, Revealing Light-Zone Location and Predominant Low Antigen Affinity.

Suan D, Kräutler NJ, Maag JLV, Butt D, Bourne K, Hermes JR, Avery DT, Young C, Statham A, Elliott M, Dinger ME, Basten A, Tangye SG, Brink R.

Immunity. 2017 Dec 19;47(6):1142-1153.e4. doi: 10.1016/j.immuni.2017.11.022.


Novel Aberrations Uncovered in Barrett's Esophagus and Esophageal Adenocarcinoma Using Whole Transcriptome Sequencing.

Maag JLV, Fisher OM, Levert-Mignon A, Kaczorowski DC, Thomas ML, Hussey DJ, Watson DI, Wettstein A, Bobryshev YV, Edwards M, Dinger ME, Lord RV.

Mol Cancer Res. 2017 Nov;15(11):1558-1569. doi: 10.1158/1541-7786.MCR-17-0332. Epub 2017 Jul 27.


Benchmarking of RNA-sequencing analysis workflows using whole-transcriptome RT-qPCR expression data.

Everaert C, Luypaert M, Maag JLV, Cheng QX, Dinger ME, Hellemans J, Mestdagh P.

Sci Rep. 2017 May 8;7(1):1559. doi: 10.1038/s41598-017-01617-3.


Widespread promoter methylation of synaptic plasticity genes in long-term potentiation in the adult brain in vivo.

Maag JL, Kaczorowski DC, Panja D, Peters TJ, Bramham CR, Wibrand K, Dinger ME.

BMC Genomics. 2017 Mar 23;18(1):250. doi: 10.1186/s12864-017-3621-x.


The long non-coding RNA NEAT1 is responsive to neuronal activity and is associated with hyperexcitability states.

Barry G, Briggs JA, Hwang DW, Nayler SP, Fortuna PR, Jonkhout N, Dachet F, Maag JL, Mestdagh P, Singh EM, Avesson L, Kaczorowski DC, Ozturk E, Jones NC, Vetter I, Arriola-Martinez L, Hu J, Franco GR, Warn VM, Gong A, Dinger ME, Rigo F, Lipovich L, Morris MJ, O'Brien TJ, Lee DS, Loeb JA, Blackshaw S, Mattick JS, Wolvetang EJ.

Sci Rep. 2017 Jan 5;7:40127. doi: 10.1038/srep40127.


CD151 Gene and Protein Expression Provides Independent Prognostic Information for Patients with Adenocarcinoma of the Esophagus and Gastroesophageal Junction Treated by Esophagectomy.

Fisher OM, Levert-Mignon AJ, Lehane CW, Botelho NK, Maag JL, Thomas ML, Edwards M, Lord SJ, Bobryshev YV, Whiteman DC, Lord RV.

Ann Surg Oncol. 2016 Dec;23(Suppl 5):746-754. Epub 2016 Aug 30.


Corrigendum: Dynamic expression of long noncoding RNAs and repeat elements in synaptic plasticity.

Maag JL, Panja D, Sporild I, Patil SS, Kaczorowski DC, Bramham CR, Dinger ME, Wibrand K.

Front Neurosci. 2016 Jul 27;10:354. doi: 10.3389/fnins.2016.00354. eCollection 2016.


Long noncoding RNAs in cancer: mechanisms of action and technological advancements.

Bartonicek N, Maag JL, Dinger ME.

Mol Cancer. 2016 May 27;15(1):43. doi: 10.1186/s12943-016-0530-6. Review.


Dynamic expression of long noncoding RNAs and repeat elements in synaptic plasticity.

Maag JL, Panja D, Sporild I, Patil S, Kaczorowski DC, Bramham CR, Dinger ME, Wibrand K.

Front Neurosci. 2015 Oct 1;9:351. doi: 10.3389/fnins.2015.00351. eCollection 2015. Erratum in: Front Neurosci. 2016;10:354.


lncRNAdb v2.0: expanding the reference database for functional long noncoding RNAs.

Quek XC, Thomson DW, Maag JL, Bartonicek N, Signal B, Clark MB, Gloss BS, Dinger ME.

Nucleic Acids Res. 2015 Jan;43(Database issue):D168-73. doi: 10.1093/nar/gku988. Epub 2014 Oct 20.


Cannabinoid effects on β amyloid fibril and aggregate formation, neuronal and microglial-activated neurotoxicity in vitro.

Janefjord E, Mååg JL, Harvey BS, Smid SD.

Cell Mol Neurobiol. 2014 Jan;34(1):31-42. doi: 10.1007/s10571-013-9984-x. Epub 2013 Sep 13.


Dietary polyphenol-derived protection against neurotoxic β-amyloid protein: from molecular to clinical.

Smid SD, Maag JL, Musgrave IF.

Food Funct. 2012 Dec;3(12):1242-50. doi: 10.1039/c2fo30075c. Review.


Contrasting protective effects of cannabinoids against oxidative stress and amyloid-β evoked neurotoxicity in vitro.

Harvey BS, Ohlsson KS, Mååg JL, Musgrave IF, Smid SD.

Neurotoxicology. 2012 Jan;33(1):138-46. doi: 10.1016/j.neuro.2011.12.015. Epub 2012 Jan 3.


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