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Items: 19

1.

Tuning Gene Activity by Inducible and Targeted Regulation of Gene Expression in Minimal Bacterial Cells.

Mariscal AM, Kakizawa S, Hsu JY, Tanaka K, González-González L, Broto A, Querol E, Lluch-Senar M, Piñero-Lambea C, Sun L, Weyman PD, Wise KS, Merryman C, Tse G, Moore AJ, Hutchison CA 3rd, Smith HO, Tomita M, Venter JC, Glass JI, Piñol J, Suzuki Y.

ACS Synth Biol. 2018 Jun 15;7(6):1538-1552. doi: 10.1021/acssynbio.8b00028. Epub 2018 May 22.

PMID:
29786424
2.

Cryo-electron tomography analyses of terminal organelle mutants suggest the motility mechanism of Mycoplasma genitalium.

Seybert A, Gonzalez-Gonzalez L, Scheffer MP, Lluch-Senar M, Mariscal AM, Querol E, Matthaeus F, Piñol J, Frangakis AS.

Mol Microbiol. 2018 May;108(3):319-329. doi: 10.1111/mmi.13938. Epub 2018 Mar 24.

PMID:
29470847
3.

Defined chromosome structure in the genome-reduced bacterium Mycoplasma pneumoniae.

Trussart M, Yus E, Martinez S, Baù D, Tahara YO, Pengo T, Widjaja M, Kretschmer S, Swoger J, Djordjevic S, Turnbull L, Whitchurch C, Miyata M, Marti-Renom MA, Lluch-Senar M, Serrano L.

Nat Commun. 2017 Mar 8;8:14665. doi: 10.1038/ncomms14665.

4.

Bacterial antisense RNAs are mainly the product of transcriptional noise.

Lloréns-Rico V, Cano J, Kamminga T, Gil R, Latorre A, Chen WH, Bork P, Glass JI, Serrano L, Lluch-Senar M.

Sci Adv. 2016 Mar 4;2(3):e1501363. doi: 10.1126/sciadv.1501363. eCollection 2016 Mar.

5.

Integration of multi-omics data of a genome-reduced bacterium: Prevalence of post-transcriptional regulation and its correlation with protein abundances.

Chen WH, van Noort V, Lluch-Senar M, Hennrich ML, Wodke JA, Yus E, Alibés A, Roma G, Mende DR, Pesavento C, Typas A, Gavin AC, Serrano L, Bork P.

Nucleic Acids Res. 2016 Feb 18;44(3):1192-202. doi: 10.1093/nar/gkw004. Epub 2016 Jan 14.

6.

Rescuing discarded spectra: Full comprehensive analysis of a minimal proteome.

Lluch-Senar M, Mancuso FM, Climente-González H, Peña-Paz MI, Sabido E, Serrano L.

Proteomics. 2016 Feb;16(4):554-63. doi: 10.1002/pmic.201500187.

PMID:
26702875
7.

Comparative "-omics" in Mycoplasma pneumoniae Clinical Isolates Reveals Key Virulence Factors.

Lluch-Senar M, Cozzuto L, Cano J, Delgado J, Llórens-Rico V, Pereyre S, Bebear C, Serrano L.

PLoS One. 2015 Sep 3;10(9):e0137354. doi: 10.1371/journal.pone.0137354. eCollection 2015.

8.

Distinguishing between productive and abortive promoters using a random forest classifier in Mycoplasma pneumoniae.

Lloréns-Rico V, Lluch-Senar M, Serrano L.

Nucleic Acids Res. 2015 Apr 20;43(7):3442-53. doi: 10.1093/nar/gkv170. Epub 2015 Mar 16.

9.

Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium.

Lluch-Senar M, Delgado J, Chen WH, Lloréns-Rico V, O'Reilly FJ, Wodke JA, Unal EB, Yus E, Martínez S, Nichols RJ, Ferrar T, Vivancos A, Schmeisky A, Stülke J, van Noort V, Gavin AC, Bork P, Serrano L.

Mol Syst Biol. 2015 Jan 21;11(1):780. doi: 10.15252/msb.20145558.

10.

MyMpn: a database for the systems biology model organism Mycoplasma pneumoniae.

Wodke JA, Alibés A, Cozzuto L, Hermoso A, Yus E, Lluch-Senar M, Serrano L, Roma G.

Nucleic Acids Res. 2015 Jan;43(Database issue):D618-23. doi: 10.1093/nar/gku1105. Epub 2014 Nov 6.

11.

Assessing the hodgepodge of non-mapped reads in bacterial transcriptomes: real or artifactual RNA chimeras?

Lloréns-Rico V, Serrano L, Lluch-Senar M.

BMC Genomics. 2014 Jul 29;15:633. doi: 10.1186/1471-2164-15-633.

12.

In situ overlap and sequence synthesis during DNA assembly.

Paetzold B, Carolis C, Ferrar T, Serrano L, Lluch-Senar M.

ACS Synth Biol. 2013 Dec 20;2(12):750-5. doi: 10.1021/sb400067v. Epub 2013 Nov 6.

13.

Dissecting the energy metabolism in Mycoplasma pneumoniae through genome-scale metabolic modeling.

Wodke JA, Puchałka J, Lluch-Senar M, Marcos J, Yus E, Godinho M, Gutiérrez-Gallego R, dos Santos VA, Serrano L, Klipp E, Maier T.

Mol Syst Biol. 2013;9:653. doi: 10.1038/msb.2013.6.

14.

Comprehensive methylome characterization of Mycoplasma genitalium and Mycoplasma pneumoniae at single-base resolution.

Lluch-Senar M, Luong K, Lloréns-Rico V, Delgado J, Fang G, Spittle K, Clark TA, Schadt E, Turner SW, Korlach J, Serrano L.

PLoS Genet. 2013;9(1):e1003191. doi: 10.1371/journal.pgen.1003191. Epub 2013 Jan 3.

15.

Transcription start site associated RNAs in bacteria.

Yus E, Güell M, Vivancos AP, Chen WH, Lluch-Senar M, Delgado J, Gavin AC, Bork P, Serrano L.

Mol Syst Biol. 2012 May 22;8:585. doi: 10.1038/msb.2012.16.

16.

A trigger enzyme in Mycoplasma pneumoniae: impact of the glycerophosphodiesterase GlpQ on virulence and gene expression.

Schmidl SR, Otto A, Lluch-Senar M, Piñol J, Busse J, Becher D, Stülke J.

PLoS Pathog. 2011 Sep;7(9):e1002263. doi: 10.1371/journal.ppat.1002263. Epub 2011 Sep 22.

17.

Bacterial transcriptomics: what is beyond the RNA horiz-ome?

Güell M, Yus E, Lluch-Senar M, Serrano L.

Nat Rev Microbiol. 2011 Aug 12;9(9):658-69. doi: 10.1038/nrmicro2620. Review.

PMID:
21836626
18.

Cell division in a minimal bacterium in the absence of ftsZ.

Lluch-Senar M, Querol E, Piñol J.

Mol Microbiol. 2010 Oct;78(2):278-89. doi: 10.1111/j.1365-2958.2010.07306.x. Epub 2010 Aug 17.

19.

A new promoterless reporter vector reveals antisense transcription in Mycoplasma genitalium.

Lluch-Senar M, Vallmitjana M, Querol E, Piñol J.

Microbiology. 2007 Aug;153(Pt 8):2743-52.

PMID:
17660438

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