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Genetic fingerprinting of salmon louse (Lepeophtheirus salmonis) populations in the North-East Atlantic using a random forest classification approach.

Jacobs A, De Noia M, Praebel K, Kanstad-Hanssen Ø, Paterno M, Jackson D, McGinnity P, Sturm A, Elmer KR, Llewellyn MS.

Sci Rep. 2018 Jan 19;8(1):1203. doi: 10.1038/s41598-018-19323-z.


High Trypanosoma spp. diversity is maintained by bats and triatomines in Espírito Santo state, Brazil.

Dario MA, Lisboa CV, Costa LM, Moratelli R, Nascimento MP, Costa LP, Leite YLR, Llewellyn MS, Xavier SCDC, Roque ALR, Jansen AM.

PLoS One. 2017 Nov 27;12(11):e0188412. doi: 10.1371/journal.pone.0188412. eCollection 2017.


Variability of Cutaneous Leishmaniasis Lesions Is Not Associated with Genetic Diversity of Leishmania tropica in Khyber Pakhtunkhwa Province of Pakistan.

Khan NH, Llewellyn MS, Schönian G, Sutherland CJ.

Am J Trop Med Hyg. 2017 Nov;97(5):1489-1497. doi: 10.4269/ajtmh.16-0887. Epub 2017 Oct 10.


Small subunit ribosomal metabarcoding reveals extraordinary trypanosomatid diversity in Brazilian bats.

Dario MA, Moratelli R, Schwabl P, Jansen AM, Llewellyn MS.

PLoS Negl Trop Dis. 2017 Jul 20;11(7):e0005790. doi: 10.1371/journal.pntd.0005790. eCollection 2017 Jul.


2b-RAD genotyping for population genomic studies of Chagas disease vectors: Rhodnius ecuadoriensis in Ecuador.

Hernandez-Castro LE, Paterno M, Villacís AG, Andersson B, Costales JA, De Noia M, Ocaña-Mayorga S, Yumiseva CA, Grijalva MJ, Llewellyn MS.

PLoS Negl Trop Dis. 2017 Jul 19;11(7):e0005710. doi: 10.1371/journal.pntd.0005710. eCollection 2017 Jul.


Parasitism perturbs the mucosal microbiome of Atlantic Salmon.

Llewellyn MS, Leadbeater S, Garcia C, Sylvain FE, Custodio M, Ang KP, Powell F, Carvalho GR, Creer S, Elliot J, Derome N.

Sci Rep. 2017 Mar 7;7:43465. doi: 10.1038/srep43465.


Hosts and vectors of Trypanosoma cruzi discrete typing units in the Chagas disease endemic region of the Paraguayan Chaco.

Acosta N, López E, Lewis MD, Llewellyn MS, Gómez A, Román F, Miles MA, Yeo M.

Parasitology. 2017 Jun;144(7):884-898. doi: 10.1017/S0031182016002663. Epub 2017 Feb 9.


Modeling Diversity in Structures of Bacterial Outer Membrane Lipids.

Ma H, Cummins DD, Edelstein NB, Gomez J, Khan A, Llewellyn MD, Picudella T, Willsey SR, Nangia S.

J Chem Theory Comput. 2017 Feb 14;13(2):811-824. doi: 10.1021/acs.jctc.6b00856. Epub 2017 Jan 31.


Prediction and Prevention of Parasitic Diseases Using a Landscape Genomics Framework.

Schwabl P, Llewellyn MS, Landguth EL, Andersson B, Kitron U, Costales JA, Ocaña S, Grijalva MJ.

Trends Parasitol. 2017 Apr;33(4):264-275. doi: 10.1016/ Epub 2016 Nov 16. Review.


pH drop impacts differentially skin and gut microbiota of the Amazonian fish tambaqui (Colossoma macropomum).

Sylvain FÉ, Cheaib B, Llewellyn M, Gabriel Correia T, Barros Fagundes D, Luis Val A, Derome N.

Sci Rep. 2016 Aug 18;6:32032. doi: 10.1038/srep32032.


Importation of Hybrid Human-Associated Trypanosoma cruzi Strains of Southern South American Origin, Colombia.

Messenger LA, Ramirez JD, Llewellyn MS, Guhl F, Miles MA.

Emerg Infect Dis. 2016 Aug;22(8):1452-5. doi: 10.3201/eid2208.150786.


Multiple cutaneous reticulohistiocytomas successfully treated with topical psoralen plus ultraviolet A therapy combined with intralesional injections of triamcinolone acetonide.

Harris AG, Wijayanti A, Llewellyn M, Muhaidat J, Kossard S, Murrell DF.

JAAD Case Rep. 2015 May 25;1(3):157-9. doi: 10.1016/j.jdcr.2015.03.006. eCollection 2015 May. No abstract available.


Response to Tibayrenc and Ayala: Reproductive clonality in protozoan pathogens--truth or artefact?

Ramírez JD, Llewellyn MS.

Mol Ecol. 2015 Dec;24(23):5782-4. doi: 10.1111/mec.13442.


The biogeography of the atlantic salmon (Salmo salar) gut microbiome.

Llewellyn MS, McGinnity P, Dionne M, Letourneau J, Thonier F, Carvalho GR, Creer S, Derome N.

ISME J. 2016 May;10(5):1280-4. doi: 10.1038/ismej.2015.189. Epub 2015 Oct 30.


Chagas disease reactivation in a heart transplant patient infected by domestic Trypanosoma cruzi discrete typing unit I (TcIDOM).

Costales JA, Kotton CN, Zurita-Leal AC, Garcia-Perez J, Llewellyn MS, Messenger LA, Bhattacharyya T, Burleigh BA.

Parasit Vectors. 2015 Aug 25;8:435. doi: 10.1186/s13071-015-1039-3.


The Chagas disease domestic transmission cycle in Guatemala: Parasite-vector switches and lack of mitochondrial co-diversification between Triatoma dimidiata and Trypanosoma cruzi subpopulations suggest non-vectorial parasite dispersal across the Motagua valley.

Pennington PM, Messenger LA, Reina J, Juárez JG, Lawrence GG, Dotson EM, Llewellyn MS, Cordón-Rosales C.

Acta Trop. 2015 Nov;151:80-7. doi: 10.1016/j.actatropica.2015.07.014. Epub 2015 Jul 26.


Trypanosoma cruzi population dynamics in the Central Ecuadorian Coast.

Costales JA, Jara-Palacios MA, Llewellyn MS, Messenger LA, Ocaña-Mayorga S, Villacís AG, Tibayrenc M, Grijalva MJ.

Acta Trop. 2015 Nov;151:88-93. doi: 10.1016/j.actatropica.2015.07.017. Epub 2015 Jul 19.


Deep sequencing of the Trypanosoma cruzi GP63 surface proteases reveals diversity and diversifying selection among chronic and congenital Chagas disease patients.

Llewellyn MS, Messenger LA, Luquetti AO, Garcia L, Torrico F, Tavares SB, Cheaib B, Derome N, Delepine M, Baulard C, Deleuze JF, Sauer S, Miles MA.

PLoS Negl Trop Dis. 2015 Apr 7;9(4):e0003458. doi: 10.1371/journal.pntd.0003458. eCollection 2015 Apr.


Ecological host fitting of Trypanosoma cruzi TcI in Bolivia: mosaic population structure, hybridization and a role for humans in Andean parasite dispersal.

Messenger LA, Garcia L, Vanhove M, Huaranca C, Bustamante M, Torrico M, Torrico F, Miles MA, Llewellyn MS.

Mol Ecol. 2015 May;24(10):2406-22. doi: 10.1111/mec.13186. Epub 2015 Apr 22.


Leishmania donovani populations in Eastern Sudan: temporal structuring and a link between human and canine transmission.

Baleela R, Llewellyn MS, Fitzpatrick S, Kuhls K, Schönian G, Miles MA, Mauricio IL.

Parasit Vectors. 2014 Nov 20;7:496. doi: 10.1186/s13071-014-0496-4.


Molecular genotyping of Trypanosoma cruzi for lineage assignment and population genetics.

Messenger LA, Yeo M, Lewis MD, Llewellyn MS, Miles MA.

Methods Mol Biol. 2015;1201:297-337. doi: 10.1007/978-1-4939-1438-8_19.


Optimized multilocus sequence typing (MLST) scheme for Trypanosoma cruzi.

Diosque P, Tomasini N, Lauthier JJ, Messenger LA, Monje Rumi MM, Ragone PG, Alberti-D'Amato AM, Pérez Brandán C, Barnabé C, Tibayrenc M, Lewis MD, Llewellyn MS, Miles MA, Yeo M.

PLoS Negl Trop Dis. 2014 Aug 28;8(8):e3117. doi: 10.1371/journal.pntd.0003117. eCollection 2014 Aug.


Reproductive clonality in protozoan pathogens--truth or artefact?

Ramírez JD, Llewellyn MS.

Mol Ecol. 2014 Sep;23(17):4195-202. doi: 10.1111/mec.12872. Review.


Teleost microbiomes: the state of the art in their characterization, manipulation and importance in aquaculture and fisheries.

Llewellyn MS, Boutin S, Hoseinifar SH, Derome N.

Front Microbiol. 2014 Jun 2;5:207. doi: 10.3389/fmicb.2014.00207. eCollection 2014. Review.


Wild Trypanosoma cruzi I genetic diversity in Brazil suggests admixture and disturbance in parasite populations from the Atlantic Forest region.

Lima VS, Jansen AM, Messenger LA, Miles MA, Llewellyn MS.

Parasit Vectors. 2014 Jun 5;7:263. doi: 10.1186/1756-3305-7-263.


The sonographic "bright band sign" of splenic infarction.

Llewellyn ME, Jeffrey RB, DiMaio MA, Olcott EW.

J Ultrasound Med. 2014 Jun;33(6):929-38. doi: 10.7863/ultra.33.6.929.


Rejuvenation of the muscle stem cell population restores strength to injured aged muscles.

Cosgrove BD, Gilbert PM, Porpiglia E, Mourkioti F, Lee SP, Corbel SY, Llewellyn ME, Delp SL, Blau HM.

Nat Med. 2014 Mar;20(3):255-64. doi: 10.1038/nm.3464. Epub 2014 Feb 16.


MLSTest: novel software for multi-locus sequence data analysis in eukaryotic organisms.

Tomasini N, Lauthier JJ, Llewellyn MS, Diosque P.

Infect Genet Evol. 2013 Dec;20:188-96. doi: 10.1016/j.meegid.2013.08.029. Epub 2013 Sep 8.


Evaluating the role of Cardiac Genetics Nurses in inherited cardiac conditions services using a Maturity Matrix.

Kirk M, Simpson A, Llewellyn M, Tonkin E, Cohen D, Longley M.

Eur J Cardiovasc Nurs. 2014 Oct;13(5):418-28. doi: 10.1177/1474515113502748. Epub 2013 Sep 6.


Molecular epidemiologic source tracking of orally transmitted Chagas disease, Venezuela.

Segovia M, Carrasco HJ, Martínez CE, Messenger LA, Nessi A, Londoño JC, Espinosa R, Martínez C, Alfredo M, Bonfante-Cabarcas R, Lewis MD, de Noya BA, Miles MA, Llewellyn MS.

Emerg Infect Dis. 2013 Jul;19(7):1098-101. doi: 10.3201/eid1907.121576.


North American import? Charting the origins of an enigmatic Trypanosoma cruzi domestic genotype.

Zumaya-Estrada FA, Messenger LA, Lopez-Ordonez T, Lewis MD, Flores-Lopez CA, Martínez-Ibarra AJ, Pennington PM, Cordon-Rosales C, Carrasco HV, Segovia M, Miles MA, Llewellyn MS.

Parasit Vectors. 2012 Oct 10;5:226. doi: 10.1186/1756-3305-5-226.


Comparative genomic analysis of human infective Trypanosoma cruzi lineages with the bat-restricted subspecies T. cruzi marinkellei.

Franzén O, Talavera-López C, Ochaya S, Butler CE, Messenger LA, Lewis MD, Llewellyn MS, Marinkelle CJ, Tyler KM, Miles MA, Andersson B.

BMC Genomics. 2012 Oct 5;13:531. doi: 10.1186/1471-2164-13-531.


Contemporary cryptic sexuality in Trypanosoma cruzi.

Ramírez JD, Guhl F, Messenger LA, Lewis MD, Montilla M, Cucunuba Z, Miles MA, Llewellyn MS.

Mol Ecol. 2012 Sep;21(17):4216-26. doi: 10.1111/j.1365-294X.2012.05699.x. Epub 2012 Jul 9. Erratum in: Mol Ecol. 2013 Mar;22(5):1482.


Reversible mental status change and renal dysfunction associated with the use of high-dose oral valaciclovir therapy for acute retinal necrosis.

Lee RM, Llewellyn M, Houston A, Hughes EH.

Retin Cases Brief Rep. 2012 Summer;6(3):266-8. doi: 10.1097/ICB.0b013e3182252859.


Geographical distribution of Trypanosoma cruzi genotypes in Venezuela.

Carrasco HJ, Segovia M, Llewellyn MS, Morocoima A, Urdaneta-Morales S, Martínez C, Martínez CE, Garcia C, Rodríguez M, Espinosa R, de Noya BA, Díaz-Bello Z, Herrera L, Fitzpatrick S, Yeo M, Miles MA, Feliciangeli MD.

PLoS Negl Trop Dis. 2012;6(6):e1707. doi: 10.1371/journal.pntd.0001707. Epub 2012 Jun 26.


Multiple mitochondrial introgression events and heteroplasmy in trypanosoma cruzi revealed by maxicircle MLST and next generation sequencing.

Messenger LA, Llewellyn MS, Bhattacharyya T, Franzén O, Lewis MD, Ramírez JD, Carrasco HJ, Andersson B, Miles MA.

PLoS Negl Trop Dis. 2012;6(4):e1584. doi: 10.1371/journal.pntd.0001584. Epub 2012 Apr 10.


The revised Trypanosoma cruzi subspecific nomenclature: rationale, epidemiological relevance and research applications.

Zingales B, Miles MA, Campbell DA, Tibayrenc M, Macedo AM, Teixeira MM, Schijman AG, Llewellyn MS, Lages-Silva E, Machado CR, Andrade SG, Sturm NR.

Infect Genet Evol. 2012 Mar;12(2):240-53. doi: 10.1016/j.meegid.2011.12.009. Epub 2011 Dec 27. Review.


Candidate targets for Multilocus Sequence Typing of Trypanosoma cruzi: validation using parasite stocks from the Chaco Region and a set of reference strains.

Lauthier JJ, Tomasini N, Barnabé C, Rumi MM, D'Amato AM, Ragone PG, Yeo M, Lewis MD, Llewellyn MS, Basombrío MA, Miles MA, Tibayrenc M, Diosque P.

Infect Genet Evol. 2012 Mar;12(2):350-8. doi: 10.1016/j.meegid.2011.12.008. Epub 2011 Dec 22.


Recent, independent and anthropogenic origins of Trypanosoma cruzi hybrids.

Lewis MD, Llewellyn MS, Yeo M, Acosta N, Gaunt MW, Miles MA.

PLoS Negl Trop Dis. 2011 Oct;5(10):e1363. doi: 10.1371/journal.pntd.0001363. Epub 2011 Oct 11.


A national health inequalities fund for Wales: concept, design and implementation.

Longley M, Llewellyn M, Beddow T, Cohen D, Corson J, Warner M.

Health Policy. 2011 Dec;103(2-3):141-8. doi: 10.1016/j.healthpol.2011.08.001. Epub 2011 Sep 15.


Invasion mechanisms among emerging food-borne protozoan parasites.

Yoshida N, Tyler KM, Llewellyn MS.

Trends Parasitol. 2011 Oct;27(10):459-66. doi: 10.1016/ Epub 2011 Aug 15. Review.


Multilocus sequence typing (MLST) for lineage assignment and high resolution diversity studies in Trypanosoma cruzi.

Yeo M, Mauricio IL, Messenger LA, Lewis MD, Llewellyn MS, Acosta N, Bhattacharyya T, Diosque P, Carrasco HJ, Miles MA.

PLoS Negl Trop Dis. 2011 Jun;5(6):e1049. doi: 10.1371/journal.pntd.0001049. Epub 2011 Jun 21.


Shotgun sequencing analysis of Trypanosoma cruzi I Sylvio X10/1 and comparison with T. cruzi VI CL Brener.

Franzén O, Ochaya S, Sherwood E, Lewis MD, Llewellyn MS, Miles MA, Andersson B.

PLoS Negl Trop Dis. 2011 Mar 8;5(3):e984. doi: 10.1371/journal.pntd.0000984.


Extraordinary Trypanosoma cruzi diversity within single mammalian reservoir hosts implies a mechanism of diversifying selection.

Llewellyn MS, Rivett-Carnac JB, Fitzpatrick S, Lewis MD, Yeo M, Gaunt MW, Miles MA.

Int J Parasitol. 2011 May;41(6):609-14. doi: 10.1016/j.ijpara.2010.12.004. Epub 2011 Jan 11.


Sex, subdivision, and domestic dispersal of Trypanosoma cruzi lineage I in southern Ecuador.

Ocaña-Mayorga S, Llewellyn MS, Costales JA, Miles MA, Grijalva MJ.

PLoS Negl Trop Dis. 2010 Dec 14;4(12):e915. doi: 10.1371/journal.pntd.0000915.


Short telomeres and stem cell exhaustion model Duchenne muscular dystrophy in mdx/mTR mice.

Sacco A, Mourkioti F, Tran R, Choi J, Llewellyn M, Kraft P, Shkreli M, Delp S, Pomerantz JH, Artandi SE, Blau HM.

Cell. 2010 Dec 23;143(7):1059-71. doi: 10.1016/j.cell.2010.11.039. Epub 2010 Dec 9.


Identification and lineage genotyping of South American trypanosomes using fluorescent fragment length barcoding.

Hamilton PB, Lewis MD, Cruickshank C, Gaunt MW, Yeo M, Llewellyn MS, Valente SA, Maia da Silva F, Stevens JR, Miles MA, Teixeira MM.

Infect Genet Evol. 2011 Jan;11(1):44-51. doi: 10.1016/j.meegid.2010.10.012. Epub 2010 Oct 26.


Orderly recruitment of motor units under optical control in vivo.

Llewellyn ME, Thompson KR, Deisseroth K, Delp SL.

Nat Med. 2010 Oct;16(10):1161-5. doi: 10.1038/nm.2228. Epub 2010 Sep 26.


Analysis of molecular diversity of the Trypanosoma cruzi trypomastigote small surface antigen reveals novel epitopes, evidence of positive selection and potential implications for lineage-specific serology.

Bhattacharyya T, Brooks J, Yeo M, Carrasco HJ, Lewis MD, Llewellyn MS, Miles MA.

Int J Parasitol. 2010 Jul;40(8):921-8. doi: 10.1016/j.ijpara.2010.01.002. Epub 2010 Jan 22.


Genotyping of Trypanosoma cruzi: systematic selection of assays allowing rapid and accurate discrimination of all known lineages.

Lewis MD, Ma J, Yeo M, Carrasco HJ, Llewellyn MS, Miles MA.

Am J Trop Med Hyg. 2009 Dec;81(6):1041-9. doi: 10.4269/ajtmh.2009.09-0305.

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