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Items: 1 to 50 of 81

1.

Elastic strain and twist analysis of protein structural data and allostery of the transmembrane channel KcsA.

Mitchell MR, Leibler S.

Phys Biol. 2017 Nov 8. doi: 10.1088/1478-3975/aa9906. [Epub ahead of print]

PMID:
29116053
2.

Bet Hedging against Demographic Fluctuations.

Xue B, Leibler S.

Phys Rev Lett. 2017 Sep 8;119(10):108103. doi: 10.1103/PhysRevLett.119.108103. Epub 2017 Sep 8.

PMID:
28949168
3.

Strain analysis of protein structures and low dimensionality of mechanical allosteric couplings.

Mitchell MR, Tlusty T, Leibler S.

Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):E5847-E5855. Epub 2016 Sep 21.

4.

Evolutionary learning of adaptation to varying environments through a transgenerational feedback.

Xue B, Leibler S.

Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):11266-11271. Epub 2016 Sep 19.

5.

Protein sectors: statistical coupling analysis versus conservation.

Teşileanu T, Colwell LJ, Leibler S.

PLoS Comput Biol. 2015 Feb 27;11(2):e1004091. doi: 10.1371/journal.pcbi.1004091. eCollection 2015 Feb.

6.

Multifarious assembly mixtures: systems allowing retrieval of diverse stored structures.

Murugan A, Zeravcic Z, Brenner MP, Leibler S.

Proc Natl Acad Sci U S A. 2015 Jan 6;112(1):54-9. doi: 10.1073/pnas.1413941112. Epub 2014 Dec 22.

7.

A model for the generation and transmission of variations in evolution.

Rivoire O, Leibler S.

Proc Natl Acad Sci U S A. 2014 May 13;111(19):E1940-9. doi: 10.1073/pnas.1323901111. Epub 2014 Apr 24.

8.

Trend and fluctuations: analysis and design of population dynamics measurements in replicate ecosystems.

Hekstra DR, Cocco S, Monasson R, Leibler S.

Phys Rev E Stat Nonlin Soft Matter Phys. 2013 Dec;88(6):062714. Epub 2013 Dec 16.

PMID:
24483493
9.

Behavioral diversity in microbes and low-dimensional phenotypic spaces.

Jordan D, Kuehn S, Katifori E, Leibler S.

Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):14018-23. doi: 10.1073/pnas.1308282110. Epub 2013 Jul 29.

10.

Dynamic persistence of antibiotic-stressed mycobacteria.

Wakamoto Y, Dhar N, Chait R, Schneider K, Signorino-Gelo F, Leibler S, McKinney JD.

Science. 2013 Jan 4;339(6115):91-5. doi: 10.1126/science.1229858.

11.

Speed, dissipation, and error in kinetic proofreading.

Murugan A, Huse DA, Leibler S.

Proc Natl Acad Sci U S A. 2012 Jul 24;109(30):12034-9. doi: 10.1073/pnas.1119911109. Epub 2012 Jul 11.

12.

Contingency and statistical laws in replicate microbial closed ecosystems.

Hekstra DR, Leibler S.

Cell. 2012 May 25;149(5):1164-73. doi: 10.1016/j.cell.2012.03.040.

13.

Quantitation of cellular dynamics in growing Arabidopsis roots with light sheet microscopy.

Sena G, Frentz Z, Birnbaum KD, Leibler S.

PLoS One. 2011;6(6):e21303. doi: 10.1371/journal.pone.0021303. Epub 2011 Jun 22.

14.

An interdomain sector mediating allostery in Hsp70 molecular chaperones.

Smock RG, Rivoire O, Russ WP, Swain JF, Leibler S, Ranganathan R, Gierasch LM.

Mol Syst Biol. 2010 Sep 21;6:414. doi: 10.1038/msb.2010.65.

15.

Microbial population dynamics by digital in-line holographic microscopy.

Frentz Z, Kuehn S, Hekstra D, Leibler S.

Rev Sci Instrum. 2010 Aug;81(8):084301. doi: 10.1063/1.3473937.

16.

Cooperation and Hamilton's rule in a simple synthetic microbial system.

Chuang JS, Rivoire O, Leibler S.

Mol Syst Biol. 2010 Aug 10;6:398. doi: 10.1038/msb.2010.57.

17.

Individual histories and selection in heterogeneous populations.

Leibler S, Kussell E.

Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):13183-8. doi: 10.1073/pnas.0912538107. Epub 2010 Jul 2.

18.

Protein sectors: evolutionary units of three-dimensional structure.

Halabi N, Rivoire O, Leibler S, Ranganathan R.

Cell. 2009 Aug 21;138(4):774-86. doi: 10.1016/j.cell.2009.07.038.

19.

Neuronal couplings between retinal ganglion cells inferred by efficient inverse statistical physics methods.

Cocco S, Leibler S, Monasson R.

Proc Natl Acad Sci U S A. 2009 Aug 18;106(33):14058-62. doi: 10.1073/pnas.0906705106. Epub 2009 Jul 31.

20.

Simpson's paradox in a synthetic microbial system.

Chuang JS, Rivoire O, Leibler S.

Science. 2009 Jan 9;323(5911):272-5. doi: 10.1126/science.1166739.

21.

Printing multistrain bacterial patterns with a piezoelectric inkjet printer.

Merrin J, Leibler S, Chuang JS.

PLoS One. 2007 Jul 25;2(7):e663.

22.

Polymer-population mapping and localization in the space of phenotypes.

Kussell E, Leibler S, Grosberg A.

Phys Rev Lett. 2006 Aug 11;97(6):068101. Epub 2006 Aug 7.

PMID:
17026205
23.

Precise domain specification in the developing Drosophila embryo.

Houchmandzadeh B, Wieschaus E, Leibler S.

Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Dec;72(6 Pt 1):061920. Epub 2005 Dec 30.

PMID:
16485987
24.

Phenotypic diversity, population growth, and information in fluctuating environments.

Kussell E, Leibler S.

Science. 2005 Sep 23;309(5743):2075-8. Epub 2005 Aug 25.

25.

Bacterial persistence: a model of survival in changing environments.

Kussell E, Kishony R, Balaban NQ, Leibler S.

Genetics. 2005 Apr;169(4):1807-14. Epub 2005 Jan 31.

26.

Bacterial persistence as a phenotypic switch.

Balaban NQ, Merrin J, Chait R, Kowalik L, Leibler S.

Science. 2004 Sep 10;305(5690):1622-5. Epub 2004 Aug 12.

27.

Resilient circadian oscillator revealed in individual cyanobacteria.

Mihalcescu I, Hsing W, Leibler S.

Nature. 2004 Jul 1;430(6995):81-5.

PMID:
15229601
28.

DNA looping and physical constraints on transcription regulation.

Vilar JM, Leibler S.

J Mol Biol. 2003 Aug 29;331(5):981-9.

PMID:
12927535
29.

Environmental stresses can alleviate the average deleterious effect of mutations.

Kishony R, Leibler S.

J Biol. 2003;2(2):14. Epub 2003 May 29.

30.

Modeling network dynamics: the lac operon, a case study.

Vilar JM, Guet CC, Leibler S.

J Cell Biol. 2003 May 12;161(3):471-6. Review.

31.

Combinatorial synthesis of genetic networks.

Guet CC, Elowitz MB, Hsing W, Leibler S.

Science. 2002 May 24;296(5572):1466-70.

32.

Mechanisms of noise-resistance in genetic oscillators.

Vilar JM, Kueh HY, Barkai N, Leibler S.

Proc Natl Acad Sci U S A. 2002 Apr 30;99(9):5988-92. Epub 2002 Apr 23.

33.

Establishment of developmental precision and proportions in the early Drosophila embryo.

Houchmandzadeh B, Wieschaus E, Leibler S.

Nature. 2002 Feb 14;415(6873):798-802.

PMID:
11845210
34.

Ordering genes in a flagella pathway by analysis of expression kinetics from living bacteria.

Kalir S, McClure J, Pabbaraju K, Southward C, Ronen M, Leibler S, Surette MG, Alon U.

Science. 2001 Jun 15;292(5524):2080-3.

35.

Physical properties determining self-organization of motors and microtubules.

Surrey T, Nedelec F, Leibler S, Karsenti E.

Science. 2001 May 11;292(5519):1167-71.

36.

An ultrasensitive bacterial motor revealed by monitoring signaling proteins in single cells.

Cluzel P, Surette M, Leibler S.

Science. 2000 Mar 3;287(5458):1652-5.

37.

A synthetic oscillatory network of transcriptional regulators.

Elowitz MB, Leibler S.

Nature. 2000 Jan 20;403(6767):335-8.

PMID:
10659856
38.

Circadian clocks limited by noise.

Barkai N, Leibler S.

Nature. 2000 Jan 20;403(6767):267-8. No abstract available.

PMID:
10659837
39.

From molecular to modular cell biology.

Hartwell LH, Hopfield JJ, Leibler S, Murray AW.

Nature. 1999 Dec 2;402(6761 Suppl):C47-52.

PMID:
10591225
40.

Robustness in bacterial chemotaxis.

Alon U, Surette MG, Barkai N, Leibler S.

Nature. 1999 Jan 14;397(6715):168-71.

PMID:
9923680
41.

Protein mobility in the cytoplasm of Escherichia coli.

Elowitz MB, Surette MG, Wolf PE, Stock JB, Leibler S.

J Bacteriol. 1999 Jan;181(1):197-203.

42.

Response regulator output in bacterial chemotaxis.

Alon U, Camarena L, Surette MG, Aguera y Arcas B, Liu Y, Leibler S, Stock JB.

EMBO J. 1998 Aug 3;17(15):4238-48.

43.

Bacterial chemotaxis. United we sense...

Barkai N, Leibler S.

Nature. 1998 May 7;393(6680):18-9, 21. No abstract available.

PMID:
9590684
44.

Chromophore-assisted light inactivation and self-organization of microtubules and motors.

Surrey T, Elowitz MB, Wolf PE, Yang F, Nédélec F, Shokat K, Leibler S.

Proc Natl Acad Sci U S A. 1998 Apr 14;95(8):4293-8.

45.

Photoactivation turns green fluorescent protein red.

Elowitz MB, Surette MG, Wolf PE, Stock J, Leibler S.

Curr Biol. 1997 Oct 1;7(10):809-12.

46.

Self-organization of microtubules and motors.

Nédélec FJ, Surrey T, Maggs AC, Leibler S.

Nature. 1997 Sep 18;389(6648):305-8.

PMID:
9305848
47.

Robustness in simple biochemical networks.

Barkai N, Leibler S.

Nature. 1997 Jun 26;387(6636):913-7.

PMID:
9202124
48.

Assembly and positioning of microtubule asters in microfabricated chambers.

Holy TE, Dogterom M, Yurke B, Leibler S.

Proc Natl Acad Sci U S A. 1997 Jun 10;94(12):6228-31.

49.

Subdiffusion and Anomalous Local Viscoelasticity in Actin Networks.

Amblard F, Maggs AC, Yurke B, Pargellis A, Leibler S.

Phys Rev Lett. 1996 Nov 18;77(21):4470-4473. No abstract available.

PMID:
10062546
50.

Microtubule dynamics: Caps, catastrophes, and coupled hydrolysis.

Flyvbjerg H, Holy TE, Leibler S.

Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics. 1996 Nov;54(5):5538-5560. No abstract available.

PMID:
9965740

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