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Items: 1 to 50 of 145

1.

Assessment of the cPAS-based BGISEQ-500 platform for metagenomic sequencing.

Fang C, Zhong H, Lin Y, Chen B, Han M, Ren H, Lu H, Luber JM, Xia M, Li W, Stein S, Xu X, Zhang W, Drmanac R, Wang J, Yang H, Hammarström L, Kostic AD, Kristiansen K, Li J.

Gigascience. 2017 Dec 23. doi: 10.1093/gigascience/gix133. [Epub ahead of print]

PMID:
29293960
2.

Aether: Leveraging Linear Programming For Optimal Cloud Computing In Genomics.

Luber JM, Tierney BT, Cofer EM, Patel CJ, Kostic AD.

Bioinformatics. 2017 Dec 8. doi: 10.1093/bioinformatics/btx787. [Epub ahead of print]

PMID:
29228186
3.

A first-in-human pharmacodynamic and pharmacokinetic study of a fully human anti-glucagon receptor monoclonal antibody in normal healthy volunteers.

Kostic A, King TA, Yang F, Chan KC, Yancopoulos GD, Gromada J, Harp JB.

Diabetes Obes Metab. 2018 Feb;20(2):283-291. doi: 10.1111/dom.13075. Epub 2017 Sep 14.

4.

Intestinal virome changes precede autoimmunity in type I diabetes-susceptible children.

Zhao G, Vatanen T, Droit L, Park A, Kostic AD, Poon TW, Vlamakis H, Siljander H, Härkönen T, Hämäläinen AM, Peet A, Tillmann V, Ilonen J, Wang D, Knip M, Xavier RJ, Virgin HW.

Proc Natl Acad Sci U S A. 2017 Jul 25;114(30):E6166-E6175. doi: 10.1073/pnas.1706359114. Epub 2017 Jul 10.

5.

Gut Microbiota: Small Molecules Modulate Host Cellular Functions.

Luber JM, Kostic AD.

Curr Biol. 2017 Apr 24;27(8):R307-R310. doi: 10.1016/j.cub.2017.03.026.

PMID:
28441565
6.

A Microbiome Foundation for the Study of Crohn's Disease.

Gevers D, Kugathasan S, Knights D, Kostic AD, Knight R, Xavier RJ.

Cell Host Microbe. 2017 Mar 8;21(3):301-304. doi: 10.1016/j.chom.2017.02.012.

PMID:
28279336
7.

Association of Dietary Patterns With Risk of Colorectal Cancer Subtypes Classified by Fusobacterium nucleatum in Tumor Tissue.

Mehta RS, Nishihara R, Cao Y, Song M, Mima K, Qian ZR, Nowak JA, Kosumi K, Hamada T, Masugi Y, Bullman S, Drew DA, Kostic AD, Fung TT, Garrett WS, Huttenhower C, Wu K, Meyerhardt JA, Zhang X, Willett WC, Giovannucci EL, Fuchs CS, Chan AT, Ogino S.

JAMA Oncol. 2017 Jul 1;3(7):921-927. doi: 10.1001/jamaoncol.2016.6374.

PMID:
28125762
8.

Emerging Concepts and Technologies for the Discovery of Microorganisms Involved in Human Disease.

Bullman S, Meyerson M, Kostic AD.

Annu Rev Pathol. 2017 Jan 24;12:217-244. doi: 10.1146/annurev-pathol-012615-044305. Epub 2016 Dec 5. Review.

PMID:
27959634
9.

Fusobacterium nucleatum in Colorectal Carcinoma Tissue According to Tumor Location.

Mima K, Cao Y, Chan AT, Qian ZR, Nowak JA, Masugi Y, Shi Y, Song M, da Silva A, Gu M, Li W, Hamada T, Kosumi K, Hanyuda A, Liu L, Kostic AD, Giannakis M, Bullman S, Brennan CA, Milner DA, Baba H, Garraway LA, Meyerhardt JA, Garrett WS, Huttenhower C, Meyerson M, Giovannucci EL, Fuchs CS, Nishihara R, Ogino S.

Clin Transl Gastroenterol. 2016 Nov 3;7(11):e200. doi: 10.1038/ctg.2016.53.

10.

Preliminary investigation of mineral content of pollen collected from different Serbian maize hybrids - is there any potential nutritional value?

Kostić AŽ, Kaluđerović LM, Dojčinović BP, Barać MB, Babić VB, Mačukanović-Jocić MP.

J Sci Food Agric. 2017 Jul;97(9):2803-2809. doi: 10.1002/jsfa.8108. Epub 2016 Nov 25.

PMID:
27778338
11.

In response: The challenges of blood pressure assessment in schoolchildren.

Maric G, Dusanovic M, Kostic A, Pekmezovic T, Kisic Tepavcevic D.

Blood Press Monit. 2016 Oct;21(5):317-8. doi: 10.1097/MBP.0000000000000207. No abstract available.

PMID:
27603925
12.

Dysbiosis, inflammation, and response to treatment: a longitudinal study of pediatric subjects with newly diagnosed inflammatory bowel disease.

Shaw KA, Bertha M, Hofmekler T, Chopra P, Vatanen T, Srivatsa A, Prince J, Kumar A, Sauer C, Zwick ME, Satten GA, Kostic AD, Mulle JG, Xavier RJ, Kugathasan S.

Genome Med. 2016 Jul 13;8(1):75. doi: 10.1186/s13073-016-0331-y.

13.

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans.

Vatanen T, Kostic AD, d'Hennezel E, Siljander H, Franzosa EA, Yassour M, Kolde R, Vlamakis H, Arthur TD, Hämäläinen AM, Peet A, Tillmann V, Uibo R, Mokurov S, Dorshakova N, Ilonen J, Virtanen SM, Szabo SJ, Porter JA, Lähdesmäki H, Huttenhower C, Gevers D, Cullen TW, Knip M; DIABIMMUNE Study Group, Xavier RJ.

Cell. 2016 Jun 2;165(6):1551. doi: 10.1016/j.cell.2016.05.056. No abstract available.

14.

Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans.

Vatanen T, Kostic AD, d'Hennezel E, Siljander H, Franzosa EA, Yassour M, Kolde R, Vlamakis H, Arthur TD, Hämäläinen AM, Peet A, Tillmann V, Uibo R, Mokurov S, Dorshakova N, Ilonen J, Virtanen SM, Szabo SJ, Porter JA, Lähdesmäki H, Huttenhower C, Gevers D, Cullen TW, Knip M; DIABIMMUNE Study Group, Xavier RJ.

Cell. 2016 May 5;165(4):842-53. doi: 10.1016/j.cell.2016.04.007. Epub 2016 Apr 28. Erratum in: Cell. 2016 Jun 2;165(6):1551.

15.

Prevalence of hypertension in a sample of schoolchildren in the Belgrade district.

Maric GD, Dusanovic MG, Kostic AV, Pekmezovic TD, Kisic-Tepavcevic DB.

Blood Press Monit. 2016 Jun;21(3):155-9. doi: 10.1097/MBP.0000000000000179.

PMID:
26895304
16.

Mineral content of bee pollen from Serbia.

Kostić AŽ, Pešić MB, Mosić MD, Dojčinović BP, Natić MM, Trifković JĐ.

Arh Hig Rada Toksikol. 2015 Dec;66(4):251-8. doi: 10.1515/aiht-2015-66-2630.

PMID:
26751856
17.

A Phase I First-in-Human Study of Nesvacumab (REGN910), a Fully Human Anti-Angiopoietin-2 (Ang2) Monoclonal Antibody, in Patients with Advanced Solid Tumors.

Papadopoulos KP, Kelley RK, Tolcher AW, Razak AR, Van Loon K, Patnaik A, Bedard PL, Alfaro AA, Beeram M, Adriaens L, Brownstein CM, Lowy I, Kostic A, Trail PA, Gao B, DiCioccio AT, Siu LL.

Clin Cancer Res. 2016 Mar 15;22(6):1348-55. doi: 10.1158/1078-0432.CCR-15-1221. Epub 2015 Oct 21.

18.

Fusobacterium nucleatum in colorectal carcinoma tissue and patient prognosis.

Mima K, Nishihara R, Qian ZR, Cao Y, Sukawa Y, Nowak JA, Yang J, Dou R, Masugi Y, Song M, Kostic AD, Giannakis M, Bullman S, Milner DA, Baba H, Giovannucci EL, Garraway LA, Freeman GJ, Dranoff G, Garrett WS, Huttenhower C, Meyerson M, Meyerhardt JA, Chan AT, Fuchs CS, Ogino S.

Gut. 2016 Dec;65(12):1973-1980. doi: 10.1136/gutjnl-2015-310101. Epub 2015 Aug 26.

19.

Fusobacterium nucleatum and T Cells in Colorectal Carcinoma.

Mima K, Sukawa Y, Nishihara R, Qian ZR, Yamauchi M, Inamura K, Kim SA, Masuda A, Nowak JA, Nosho K, Kostic AD, Giannakis M, Watanabe H, Bullman S, Milner DA, Harris CC, Giovannucci E, Garraway LA, Freeman GJ, Dranoff G, Chan AT, Garrett WS, Huttenhower C, Fuchs CS, Ogino S.

JAMA Oncol. 2015 Aug;1(5):653-61. doi: 10.1001/jamaoncol.2015.1377.

20.

Analysis of the symmetric configuration of the circle of Willis in a series of autopsied corpses.

Stojanović N, Stefanović I, Kostić A, Radisavejević M, Stojanov D, Petrović S.

Vojnosanit Pregl. 2015 Apr;72(4):356-60.

PMID:
26040182
21.

An integrative view of microbiome-host interactions in inflammatory bowel diseases.

Wlodarska M, Kostic AD, Xavier RJ.

Cell Host Microbe. 2015 May 13;17(5):577-91. doi: 10.1016/j.chom.2015.04.008. Review.

22.

Comparative study of the functional properties of three legume seed isolates: adzuki, pea and soy bean.

Barac MB, Pesic MB, Stanojevic SP, Kostic AZ, Bivolarevic V.

J Food Sci Technol. 2015 May;52(5):2779-87. doi: 10.1007/s13197-014-1298-6. Epub 2014 Mar 5.

23.

A Phase I First-in-Human Study of Enoticumab (REGN421), a Fully Human Delta-like Ligand 4 (Dll4) Monoclonal Antibody in Patients with Advanced Solid Tumors.

Chiorean EG, LoRusso P, Strother RM, Diamond JR, Younger A, Messersmith WA, Adriaens L, Liu L, Kao RJ, DiCioccio AT, Kostic A, Leek R, Harris A, Jimeno A.

Clin Cancer Res. 2015 Jun 15;21(12):2695-703. doi: 10.1158/1078-0432.CCR-14-2797. Epub 2015 Feb 27.

24.

The dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes.

Kostic AD, Gevers D, Siljander H, Vatanen T, Hyötyläinen T, Hämäläinen AM, Peet A, Tillmann V, Pöhö P, Mattila I, Lähdesmäki H, Franzosa EA, Vaarala O, de Goffau M, Harmsen H, Ilonen J, Virtanen SM, Clish CB, Orešič M, Huttenhower C, Knip M; DIABIMMUNE Study Group, Xavier RJ.

Cell Host Microbe. 2015 Feb 11;17(2):260-73. doi: 10.1016/j.chom.2015.01.001. Epub 2015 Feb 5.

25.

Cervical epidural hematoma: case report.

Novak V, Stefanović I, Kostić A, Radisavljević M, Novak M, Jelenković B, Berilažić L.

Srp Arh Celok Lek. 2014 Sep-Oct;142(9-10):589-91.

26.

Dupilumab improves the molecular signature in skin of patients with moderate-to-severe atopic dermatitis.

Hamilton JD, Suárez-Fariñas M, Dhingra N, Cardinale I, Li X, Kostic A, Ming JE, Radin AR, Krueger JG, Graham N, Yancopoulos GD, Pirozzi G, Guttman-Yassky E.

J Allergy Clin Immunol. 2014 Dec;134(6):1293-1300. doi: 10.1016/j.jaci.2014.10.013.

27.

Inflammatory bowel disease as a model for translating the microbiome.

Huttenhower C, Kostic AD, Xavier RJ.

Immunity. 2014 Jun 19;40(6):843-54. doi: 10.1016/j.immuni.2014.05.013. Review.

28.

Barium-induced appendicitis in a 13-year old girl.

Djordjevic I, Krstic M, Slavkovic A, Marjanovic Z, Kostic A.

West Indian Med J. 2013 Sep;62(7):680-1. doi: 10.7727/wimj.2012.317. No abstract available.

PMID:
24831914
29.

Microbes and inflammation in colorectal cancer.

Kostic AD, Chun E, Meyerson M, Garrett WS.

Cancer Immunol Res. 2013 Sep;1(3):150-7. doi: 10.1158/2326-6066.CIR-13-0101. Review.

30.

The treatment-naive microbiome in new-onset Crohn's disease.

Gevers D, Kugathasan S, Denson LA, Vázquez-Baeza Y, Van Treuren W, Ren B, Schwager E, Knights D, Song SJ, Yassour M, Morgan XC, Kostic AD, Luo C, González A, McDonald D, Haberman Y, Walters T, Baker S, Rosh J, Stephens M, Heyman M, Markowitz J, Baldassano R, Griffiths A, Sylvester F, Mack D, Kim S, Crandall W, Hyams J, Huttenhower C, Knight R, Xavier RJ.

Cell Host Microbe. 2014 Mar 12;15(3):382-392. doi: 10.1016/j.chom.2014.02.005.

31.

Human genome-wide RNAi screen identifies an essential role for inositol pyrophosphates in Type-I interferon response.

Pulloor NK, Nair S, McCaffrey K, Kostic AD, Bist P, Weaver JD, Riley AM, Tyagi R, Uchil PD, York JD, Snyder SH, García-Sastre A, Potter BV, Lin R, Shears SB, Xavier RJ, Krishnan MN.

PLoS Pathog. 2014 Feb 27;10(2):e1003981. doi: 10.1371/journal.ppat.1003981. eCollection 2014 Feb. Erratum in: PLoS Pathog. 2014 Oct;10(10):e1004519. McCaffrey, Kathleen [added]. PLoS Pathog. 2014 Mar;10(3):e1004095.

32.

The microbiome in inflammatory bowel disease: current status and the future ahead.

Kostic AD, Xavier RJ, Gevers D.

Gastroenterology. 2014 May;146(6):1489-99. doi: 10.1053/j.gastro.2014.02.009. Epub 2014 Feb 19. Review.

33.

Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment.

Kostic AD, Chun E, Robertson L, Glickman JN, Gallini CA, Michaud M, Clancy TE, Chung DC, Lochhead P, Hold GL, El-Omar EM, Brenner D, Fuchs CS, Meyerson M, Garrett WS.

Cell Host Microbe. 2013 Aug 14;14(2):207-15. doi: 10.1016/j.chom.2013.07.007.

34.

Sequence-based discovery of Bradyrhizobium enterica in cord colitis syndrome.

Bhatt AS, Freeman SS, Herrera AF, Pedamallu CS, Gevers D, Duke F, Jung J, Michaud M, Walker BJ, Young S, Earl AM, Kostic AD, Ojesina AI, Hasserjian R, Ballen KK, Chen YB, Hobbs G, Antin JH, Soiffer RJ, Baden LR, Garrett WS, Hornick JL, Marty FM, Meyerson M.

N Engl J Med. 2013 Aug 8;369(6):517-28. doi: 10.1056/NEJMoa1211115.

35.

Exploring host-microbiota interactions in animal models and humans.

Kostic AD, Howitt MR, Garrett WS.

Genes Dev. 2013 Apr 1;27(7):701-18. doi: 10.1101/gad.212522.112. Review.

36.

Intestinal obstruction in children: could it be congenital abdominal bands?

Kostic A, Krstic M, Slavkovic A, Vacic N.

Pediatr Emerg Care. 2013 Apr;29(4):500-1. doi: 10.1097/PEC.0b013e31828a388f. Review.

PMID:
23558267
37.

Prognostically relevant gene signatures of high-grade serous ovarian carcinoma.

Verhaak RG, Tamayo P, Yang JY, Hubbard D, Zhang H, Creighton CJ, Fereday S, Lawrence M, Carter SL, Mermel CH, Kostic AD, Etemadmoghadam D, Saksena G, Cibulskis K, Duraisamy S, Levanon K, Sougnez C, Tsherniak A, Gomez S, Onofrio R, Gabriel S, Chin L, Zhang N, Spellman PT, Zhang Y, Akbani R, Hoadley KA, Kahn A, Köbel M, Huntsman D, Soslow RA, Defazio A, Birrer MJ, Gray JW, Weinstein JN, Bowtell DD, Drapkin R, Mesirov JP, Getz G, Levine DA, Meyerson M; Cancer Genome Atlas Research Network.

J Clin Invest. 2013 Jan;123(1):517-25. doi: 10.1172/JCI65833. Epub 2012 Dec 21.

38.

[Occlusion of maxillary artery in treatment of trigeminal neuralgia].

Novak V, Bosnjaković P, Ristić S, Kostić A, Jelenković B, Novak M.

Med Pregl. 2012 Jul-Aug;65(7-8):281-4. Serbian.

PMID:
22924246
39.

Duane type I retraction syndrome associated with Wyburn-Mason syndrome.

Vucic D, Kalezic T, Kostic A, Stojkovic M, Risimic D, Stankovic B.

Ophthalmic Genet. 2013 Mar-Jun;34(1-2):61-4. doi: 10.3109/13816810.2012.695422. Epub 2012 Jun 14.

PMID:
22697299
40.

[Risk of infection after placement of an extraventricular drainage catheter].

Novak V, Stefanović I, Kostić A, Novak M.

Srp Arh Celok Lek. 2012 Mar-Apr;140(3-4):138-41. Serbian.

41.

Semantic similarity influences early morphological priming in Serbian: a challenge to form-then-meaning accounts of word recognition.

Feldman LB, Kostić A, Gvozdenović V, O'Connor PA, Moscoso del Prado Martín F.

Psychon Bull Rev. 2012 Aug;19(4):668-76. doi: 10.3758/s13423-012-0250-x.

42.

Complications after angiogram-negative subarachnoid haemorrhage: comparative study of pretruncal and nonpretruncal hemorrhage patients.

Kostić A, Stojanov D, Stefanović I, Novak V, Kostić E, Benedeto-Stojanov D, Dragan V.

Srp Arh Celok Lek. 2012 Jan-Feb;140(1-2):8-13.

43.

Prognostic significance of intracranial pressure monitoring and intracranial hypertension in severe brain trauma patients.

Kostić A, Stefanović I, Novak V, Veselinović D, Ivanov G, Veselinović A.

Med Pregl. 2011 Sep-Oct;64(9-10):461-5.

PMID:
22097111
44.

The TPR-containing domain within Est1 homologs exhibits species-specific roles in telomerase interaction and telomere length homeostasis.

Sealey DC, Kostic AD, LeBel C, Pryde F, Harrington L.

BMC Mol Biol. 2011 Oct 18;12:45. doi: 10.1186/1471-2199-12-45.

45.

Genomic analysis identifies association of Fusobacterium with colorectal carcinoma.

Kostic AD, Gevers D, Pedamallu CS, Michaud M, Duke F, Earl AM, Ojesina AI, Jung J, Bass AJ, Tabernero J, Baselga J, Liu C, Shivdasani RA, Ogino S, Birren BW, Huttenhower C, Garrett WS, Meyerson M.

Genome Res. 2012 Feb;22(2):292-8. doi: 10.1101/gr.126573.111. Epub 2011 Oct 18.

46.

The mutational landscape of head and neck squamous cell carcinoma.

Stransky N, Egloff AM, Tward AD, Kostic AD, Cibulskis K, Sivachenko A, Kryukov GV, Lawrence MS, Sougnez C, McKenna A, Shefler E, Ramos AH, Stojanov P, Carter SL, Voet D, Cortés ML, Auclair D, Berger MF, Saksena G, Guiducci C, Onofrio RC, Parkin M, Romkes M, Weissfeld JL, Seethala RR, Wang L, Rangel-Escareño C, Fernandez-Lopez JC, Hidalgo-Miranda A, Melendez-Zajgla J, Winckler W, Ardlie K, Gabriel SB, Meyerson M, Lander ES, Getz G, Golub TR, Garraway LA, Grandis JR.

Science. 2011 Aug 26;333(6046):1157-60. doi: 10.1126/science.1208130. Epub 2011 Jul 28.

47.

PathSeq: software to identify or discover microbes by deep sequencing of human tissue.

Kostic AD, Ojesina AI, Pedamallu CS, Jung J, Verhaak RG, Getz G, Meyerson M.

Nat Biotechnol. 2011 May;29(5):393-6. doi: 10.1038/nbt.1868. No abstract available.

48.

Orbital dermoid and epidermoid cysts: case study.

Veselinović D, Krasić D, Stefanović I, Veselinović A, Radovanović Z, Kostić A, Cvetanović M.

Srp Arh Celok Lek. 2010 Nov-Dec;138(11-12):755-9.

49.

[Evaluation of using Alvarado score and C-reactive protein in diagnosing acute appendicitis in children].

Kostić A, Slavković A, Marjanović Z, Madić J, Krstić M, Zivanović D, Djerić D.

Vojnosanit Pregl. 2010 Aug;67(8):644-8. Serbian.

PMID:
20845667
50.

Morphological facilitation for regular and irregular verb formations in native and non-native speakers: Little evidence for two distinct mechanisms.

Feldman LB, Kostić A, Basnight-Brown DM, Durđević DF, Pastizzo MJ.

Biling (Camb Engl). 2010 Jan 1;13:119-135.

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