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Items: 11

1.

Targeting Ligand Specificity Linked to Tumor Tissue Topological Heterogeneity via Single-Cell Micro-Pharmacological Modeling.

Karolak A, Estrella VC, Huynh AS, Chen T, Vagner J, Morse DL, Rejniak KA.

Sci Rep. 2018 Feb 26;8(1):3638. doi: 10.1038/s41598-018-21883-z.

2.

Micropharmacology: An In Silico Approach for Assessing Drug Efficacy Within a Tumor Tissue.

Karolak A, Rejniak KA.

Bull Math Biol. 2018 Feb 8. doi: 10.1007/s11538-018-0402-x. [Epub ahead of print]

PMID:
29423880
3.

Towards personalized computational oncology: from spatial models of tumour spheroids, to organoids, to tissues.

Karolak A, Markov DA, McCawley LJ, Rejniak KA.

J R Soc Interface. 2018 Jan;15(138). pii: 20170703. doi: 10.1098/rsif.2017.0703. Review.

4.

Molecular Dynamics Simulations of Membrane-Bound STIM1 to Investigate Conformational Changes during STIM1 Activation upon Calcium Release.

Mukherjee S, Karolak A, Debant M, Buscaglia P, Renaudineau Y, Mignen O, Guida WC, Brooks WH.

J Chem Inf Model. 2017 Feb 27;57(2):335-344. doi: 10.1021/acs.jcim.6b00475. Epub 2017 Feb 15.

PMID:
28151650
5.

Microenvironmental Niches and Sanctuaries: A Route to Acquired Resistance.

Pérez-Velázquez J, Gevertz JL, Karolak A, Rejniak KA.

Adv Exp Med Biol. 2016;936:149-164.

6.

Molecular Dynamics Simulations of 5-Hydroxycytosine Damaged DNA.

Karolak A, van der Vaart A.

J Phys Chem B. 2016 Jan 14;120(1):42-8. doi: 10.1021/acs.jpcb.5b09250. Epub 2015 Dec 22.

PMID:
26654566
7.

BII stability and base step flexibility of N6-adenine methylated GATC motifs.

Karolak A, van der Vaart A.

Biophys Chem. 2015 Aug-Sep;203-204:22-7. doi: 10.1016/j.bpc.2015.05.001. Epub 2015 May 12.

PMID:
26004863
8.

Enhanced sampling simulations of DNA step parameters.

Karolak A, van der Vaart A.

J Comput Chem. 2014 Dec 15;35(32):2297-304. doi: 10.1002/jcc.23751. Epub 2014 Oct 10.

PMID:
25303338
9.

Importance of local interactions for the stability of inhibitory helix 1 in apo Ets-1.

Karolak A, van der Vaart A.

Biophys Chem. 2012 May;165-166:74-8. doi: 10.1016/j.bpc.2012.03.007. Epub 2012 Mar 23.

PMID:
22494801
10.
11.

Urinary mucoprotein fractions and 17-ketosteroids in healthy women and in patients with the stein-leventhal syndrome.

Jabloński K, Bauer A, Karolak A, Dobryszycka W.

Arch Immunol Ther Exp (Warsz). 1969;17(2):253-60. No abstract available.

PMID:
5796718

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