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Items: 6

1.

Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments.

Durand NC, Shamim MS, Machol I, Rao SS, Huntley MH, Lander ES, Aiden EL.

Cell Syst. 2016 Jul;3(1):95-8. doi: 10.1016/j.cels.2016.07.002.

2.

Deletion of DXZ4 on the human inactive X chromosome alters higher-order genome architecture.

Darrow EM, Huntley MH, Dudchenko O, Stamenova EK, Durand NC, Sun Z, Huang SC, Sanborn AL, Machol I, Shamim M, Seberg AP, Lander ES, Chadwick BP, Aiden EL.

Proc Natl Acad Sci U S A. 2016 Aug 2;113(31):E4504-12. doi: 10.1073/pnas.1609643113. Epub 2016 Jul 18.

3.

Information capacity of specific interactions.

Huntley MH, Murugan A, Brenner MP.

Proc Natl Acad Sci U S A. 2016 May 24;113(21):5841-6. doi: 10.1073/pnas.1520969113. Epub 2016 May 6.

4.

Chromatin extrusion explains key features of loop and domain formation in wild-type and engineered genomes.

Sanborn AL, Rao SS, Huang SC, Durand NC, Huntley MH, Jewett AI, Bochkov ID, Chinnappan D, Cutkosky A, Li J, Geeting KP, Gnirke A, Melnikov A, McKenna D, Stamenova EK, Lander ES, Aiden EL.

Proc Natl Acad Sci U S A. 2015 Nov 24;112(47):E6456-65. doi: 10.1073/pnas.1518552112. Epub 2015 Oct 23.

5.

A 3D map of the human genome at kilobase resolution reveals principles of chromatin looping.

Rao SS, Huntley MH, Durand NC, Stamenova EK, Bochkov ID, Robinson JT, Sanborn AL, Machol I, Omer AD, Lander ES, Aiden EL.

Cell. 2014 Dec 18;159(7):1665-80. doi: 10.1016/j.cell.2014.11.021. Epub 2014 Dec 11. Erratum in: Cell. 2015 Jul 30;162(3):687-8.

6.

Exact numerical study of pair formation with imbalanced fermion populations.

Batrouni GG, Huntley MH, Rousseau VG, Scalettar RT.

Phys Rev Lett. 2008 Mar 21;100(11):116405. Epub 2008 Mar 21.

PMID:
18517807

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