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Items: 1 to 50 of 245

1.

Complete Genome Sequence of the Amino Acid-Fermenting Clostridium propionicum X2 (DSM 1682).

Poehlein A, Schlien K, Chowdhury NP, Gottschalk G, Buckel W, Daniel R.

Genome Announc. 2016 Apr 14;4(2). pii: e00294-16. doi: 10.1128/genomeA.00294-16.

2.

The Complete Genome Sequence of Clostridium aceticum: a Missing Link between Rnf- and Cytochrome-Containing Autotrophic Acetogens.

Poehlein A, Cebulla M, Ilg MM, Bengelsdorf FR, Schiel-Bengelsdorf B, Whited G, Andreesen JR, Gottschalk G, Daniel R, Dürre P.

MBio. 2015 Sep 8;6(5):e01168-15. doi: 10.1128/mBio.01168-15.

3.

Complete Genome Sequence of Rnf- and Cytochrome-Containing Autotrophic Acetogen Clostridium aceticum DSM 1496.

Poehlein A, Bengelsdorf FR, Schiel-Bengelsdorf B, Gottschalk G, Daniel R, Dürre P.

Genome Announc. 2015 Jul 16;3(4). pii: e00786-15. doi: 10.1128/genomeA.00786-15.

4.

Cytokines in the cerebrospinal fluids of patients with chronic fatigue syndrome/myalgic encephalomyelitis.

Peterson D, Brenu EW, Gottschalk G, Ramos S, Nguyen T, Staines D, Marshall-Gradisnik S.

Mediators Inflamm. 2015;2015:929720. doi: 10.1155/2015/929720. Epub 2015 Mar 5.

5.

Cytokine network analysis of cerebrospinal fluid in myalgic encephalomyelitis/chronic fatigue syndrome.

Hornig M, Gottschalk G, Peterson DL, Knox KK, Schultz AF, Eddy ML, Che X, Lipkin WI.

Mol Psychiatry. 2016 Feb;21(2):261-9. doi: 10.1038/mp.2015.29. Epub 2015 Mar 31.

PMID:
25824300
6.

Genomic avenue to avian colisepticemia.

Huja S, Oren Y, Trost E, Brzuszkiewicz E, Biran D, Blom J, Goesmann A, Gottschalk G, Hacker J, Ron EZ, Dobrindt U.

MBio. 2015 Jan 13;6(1). pii: e01681-14. doi: 10.1128/mBio.01681-14.

7.

Generation of a vancomycin-intermediate Staphylococcus aureus (VISA) strain by two amino acid exchanges in VraS.

Berscheid A, François P, Strittmatter A, Gottschalk G, Schrenzel J, Sass P, Bierbaum G.

J Antimicrob Chemother. 2014 Dec;69(12):3190-8. doi: 10.1093/jac/dku297. Epub 2014 Aug 6.

PMID:
25103491
8.

VOC emission of various Serratia species and isolates and genome analysis of Serratia plymuthica 4Rx13.

Weise T, Thürmer A, Brady S, Kai M, Daniel R, Gottschalk G, Piechulla B.

FEMS Microbiol Lett. 2014 Mar;352(1):45-53. doi: 10.1111/1574-6968.12359. Epub 2014 Jan 7.

9.

Complete Genome Sequence of the Solvent Producer Clostridium saccharobutylicum NCP262 (DSM 13864).

Poehlein A, Hartwich K, Krabben P, Ehrenreich A, Liebl W, Dürre P, Gottschalk G, Daniel R.

Genome Announc. 2013 Nov 27;1(6). pii: e00997-13. doi: 10.1128/genomeA.00997-13.

10.

First Insights into the Genome of the Gram-Negative, Endospore-Forming Organism Sporomusa ovata Strain H1 DSM 2662.

Poehlein A, Gottschalk G, Daniel R.

Genome Announc. 2013 Sep 12;1(5). pii: e00734-13. doi: 10.1128/genomeA.00734-13.

11.

Genome-guided analysis of physiological and morphological traits of the fermentative acetate oxidizer Thermacetogenium phaeum.

Oehler D, Poehlein A, Leimbach A, Müller N, Daniel R, Gottschalk G, Schink B.

BMC Genomics. 2012 Dec 23;13:723. doi: 10.1186/1471-2164-13-723.

12.

An ancient pathway combining carbon dioxide fixation with the generation and utilization of a sodium ion gradient for ATP synthesis.

Poehlein A, Schmidt S, Kaster AK, Goenrich M, Vollmers J, Thürmer A, Bertsch J, Schuchmann K, Voigt B, Hecker M, Daniel R, Thauer RK, Gottschalk G, Müller V.

PLoS One. 2012;7(3):e33439. doi: 10.1371/journal.pone.0033439. Epub 2012 Mar 29.

13.

Genome sequence of Staphylococcus aureus VC40, a vancomycin- and daptomycin-resistant strain, to study the genetics of development of resistance to currently applied last-resort antibiotics.

Sass P, Berscheid A, Jansen A, Oedenkoven M, Szekat C, Strittmatter A, Gottschalk G, Bierbaum G.

J Bacteriol. 2012 Apr;194(8):2107-8. doi: 10.1128/JB.06631-11.

14.

Sequence of the hyperplastic genome of the naturally competent Thermus scotoductus SA-01.

Gounder K, Brzuszkiewicz E, Liesegang H, Wollherr A, Daniel R, Gottschalk G, Reva O, Kumwenda B, Srivastava M, Bricio C, Berenguer J, van Heerden E, Litthauer D.

BMC Genomics. 2011 Nov 24;12:577. doi: 10.1186/1471-2164-12-577.

15.

DNA sequence analysis of the composite plasmid pTC conferring virulence and antimicrobial resistance for porcine enterotoxigenic Escherichia coli.

Fekete PZ, Brzuszkiewicz E, Blum-Oehler G, Olasz F, Szabó M, Gottschalk G, Hacker J, Nagy B.

Int J Med Microbiol. 2012 Jan;302(1):4-9. doi: 10.1016/j.ijmm.2011.07.003. Epub 2011 Oct 13.

PMID:
22000740
16.

Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5.

Volland S, Rachinger M, Strittmatter A, Daniel R, Gottschalk G, Meyer O.

J Bacteriol. 2011 Sep;193(18):5043. doi: 10.1128/JB.05619-11. Epub 2011 Jul 8.

17.

Comparative genomics and transcriptomics of Propionibacterium acnes.

Brzuszkiewicz E, Weiner J, Wollherr A, Thürmer A, Hüpeden J, Lomholt HB, Kilian M, Gottschalk G, Daniel R, Mollenkopf HJ, Meyer TF, Brüggemann H.

PLoS One. 2011;6(6):e21581. doi: 10.1371/journal.pone.0021581. Epub 2011 Jun 27.

18.

Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC).

Brzuszkiewicz E, Thürmer A, Schuldes J, Leimbach A, Liesegang H, Meyer FD, Boelter J, Petersen H, Gottschalk G, Daniel R.

Arch Microbiol. 2011 Dec;193(12):883-91. doi: 10.1007/s00203-011-0725-6. Epub 2011 Jun 29.

19.

More than 200 genes required for methane formation from H₂ and CO₂ and energy conservation are present in Methanothermobacter marburgensis and Methanothermobacter thermautotrophicus.

Kaster AK, Goenrich M, Seedorf H, Liesegang H, Wollherr A, Gottschalk G, Thauer RK.

Archaea. 2011;2011:973848. doi: 10.1155/2011/973848. Epub 2011 Apr 27.

20.

Genomic features and insights into the biology of Mycoplasma fermentans.

Rechnitzer H, Brzuszkiewicz E, Strittmatter A, Liesegang H, Lysnyansky I, Daniel R, Gottschalk G, Rottem S.

Microbiology. 2011 Mar;157(Pt 3):760-73. doi: 10.1099/mic.0.043208-0. Epub 2010 Nov 25.

PMID:
21109561
21.

Host imprints on bacterial genomes--rapid, divergent evolution in individual patients.

Zdziarski J, Brzuszkiewicz E, Wullt B, Liesegang H, Biran D, Voigt B, Grönberg-Hernandez J, Ragnarsdottir B, Hecker M, Ron EZ, Daniel R, Gottschalk G, Hacker J, Svanborg C, Dobrindt U.

PLoS Pathog. 2010 Aug 26;6(8):e1001078. doi: 10.1371/journal.ppat.1001078.

22.

Complete genome sequence of Methanothermobacter marburgensis, a methanoarchaeon model organism.

Liesegang H, Kaster AK, Wiezer A, Goenrich M, Wollherr A, Seedorf H, Gottschalk G, Thauer RK.

J Bacteriol. 2010 Nov;192(21):5850-1. doi: 10.1128/JB.00844-10. Epub 2010 Aug 27.

23.

The genome of a Bacillus isolate causing anthrax in chimpanzees combines chromosomal properties of B. cereus with B. anthracis virulence plasmids.

Klee SR, Brzuszkiewicz EB, Nattermann H, Brüggemann H, Dupke S, Wollherr A, Franz T, Pauli G, Appel B, Liebl W, Couacy-Hymann E, Boesch C, Meyer FD, Leendertz FH, Ellerbrok H, Gottschalk G, Grunow R, Liesegang H.

PLoS One. 2010 Jul 9;5(7):e10986. doi: 10.1371/journal.pone.0010986.

24.

Clostridium ljungdahlii represents a microbial production platform based on syngas.

Köpke M, Held C, Hujer S, Liesegang H, Wiezer A, Wollherr A, Ehrenreich A, Liebl W, Gottschalk G, Dürre P.

Proc Natl Acad Sci U S A. 2010 Jul 20;107(29):13087-92. doi: 10.1073/pnas.1004716107. Epub 2010 Jul 2. Erratum in: Proc Natl Acad Sci U S A. 2010 Aug 24;107(34):15305.

25.

Adaptation of Pathogenic E. coli to Various Niches: Genome Flexibility is the Key.

Brzuszkiewicz E, Gottschalk G, Ron E, Hacker J, Dobrindt U.

Genome Dyn. 2009;6:110-25. doi: 10.1159/000235766. Epub 2009 Aug 19.

PMID:
19696497
26.

Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems.

Schmeisser C, Liesegang H, Krysciak D, Bakkou N, Le Quéré A, Wollherr A, Heinemeyer I, Morgenstern B, Pommerening-Röser A, Flores M, Palacios R, Brenner S, Gottschalk G, Schmitz RA, Broughton WJ, Perret X, Strittmatter AW, Streit WR.

Appl Environ Microbiol. 2009 Jun;75(12):4035-45. doi: 10.1128/AEM.00515-09. Epub 2009 Apr 17.

27.

A universal strategy for high-yield production of soluble and functional clostridial collagenases in E. coli.

Ducka P, Eckhard U, Schönauer E, Kofler S, Gottschalk G, Brandstetter H, Nüss D.

Appl Microbiol Biotechnol. 2009 Jul;83(6):1055-65. doi: 10.1007/s00253-009-1953-4. Epub 2009 Mar 31.

28.

Genome sequence of Desulfobacterium autotrophicum HRM2, a marine sulfate reducer oxidizing organic carbon completely to carbon dioxide.

Strittmatter AW, Liesegang H, Rabus R, Decker I, Amann J, Andres S, Henne A, Fricke WF, Martinez-Arias R, Bartels D, Goesmann A, Krause L, Pühler A, Klenk HP, Richter M, Schüler M, Glöckner FO, Meyerdierks A, Gottschalk G, Amann R.

Environ Microbiol. 2009 May;11(5):1038-55. doi: 10.1111/j.1462-2920.2008.01825.x. Epub 2009 Jan 14.

29.

RamA, a protein required for reductive activation of corrinoid-dependent methylamine methyltransferase reactions in methanogenic archaea.

Ferguson T, Soares JA, Lienard T, Gottschalk G, Krzycki JA.

J Biol Chem. 2009 Jan 23;284(4):2285-95. doi: 10.1074/jbc.M807392200. Epub 2008 Nov 28. Erratum in: J Biol Chem. 2012 Mar 16;287(12):9328.

30.

Cell physiology and protein secretion of Bacillus licheniformis compared to Bacillus subtilis.

Voigt B, Antelmann H, Albrecht D, Ehrenreich A, Maurer KH, Evers S, Gottschalk G, van Dijl JM, Schweder T, Hecker M.

J Mol Microbiol Biotechnol. 2009;16(1-2):53-68. doi: 10.1159/000142894. Epub 2008 Oct 29.

PMID:
18957862
31.

Biotech genomics-genome-based analysis of biotechnologically relevant prokaryotes. Preface.

Gottschalk G.

J Mol Microbiol Biotechnol. 2009;16(1-2):5. doi: 10.1159/000142889. Epub 2008 Oct 29. No abstract available.

32.

Comparative genomics of clostridia: link between the ecological niche and cell surface properties.

Brüggemann H, Gottschalk G.

Ann N Y Acad Sci. 2008 Mar;1125:73-81. doi: 10.1196/annals.1419.021.

PMID:
18378588
33.

The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.

Seedorf H, Fricke WF, Veith B, Brüggemann H, Liesegang H, Strittmatter A, Miethke M, Buckel W, Hinderberger J, Li F, Hagemeier C, Thauer RK, Gottschalk G.

Proc Natl Acad Sci U S A. 2008 Feb 12;105(6):2128-33. doi: 10.1073/pnas.0711093105. Epub 2008 Jan 24.

34.

Identification of genes involved in salt adaptation in the archaeon Methanosarcina mazei Gö1 using genome-wide gene expression profiling.

Pflüger K, Ehrenreich A, Salmon K, Gunsalus RP, Deppenmeier U, Gottschalk G, Müller V.

FEMS Microbiol Lett. 2007 Dec;277(1):79-89.

35.

Metagenomics of the deep Mediterranean, a warm bathypelagic habitat.

Martín-Cuadrado AB, López-García P, Alba JC, Moreira D, Monticelli L, Strittmatter A, Gottschalk G, Rodríguez-Valera F.

PLoS One. 2007 Sep 19;2(9):e914.

36.

Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42.

Chen XH, Koumoutsi A, Scholz R, Eisenreich A, Schneider K, Heinemeyer I, Morgenstern B, Voss B, Hess WR, Reva O, Junge H, Voigt B, Jungblut PR, Vater J, Süssmuth R, Liesegang H, Strittmatter A, Gottschalk G, Borriss R.

Nat Biotechnol. 2007 Sep;25(9):1007-14. Epub 2007 Aug 19.

PMID:
17704766
37.

Class I and class II lysyl-tRNA synthetase mutants and the genetic encoding of pyrrolysine in Methanosarcina spp.

Mahapatra A, Srinivasan G, Richter KB, Meyer A, Lienard T, Zhang JK, Zhao G, Kang PT, Chan M, Gottschalk G, Metcalf WW, Krzycki JA.

Mol Microbiol. 2007 Jun;64(5):1306-18.

38.
39.

Molecular analysis of vitiligo lesions reveals sporadic melanocyte survival.

Gottschalk GM, Kidson SH.

Int J Dermatol. 2007 Mar;46(3):268-72.

PMID:
17343582
40.
41.

Pediatric HIV/AIDS and the skin: an update.

Gottschalk GM.

Dermatol Clin. 2006 Oct;24(4):531-6, vii. Review.

PMID:
17010781
42.

Genome sequence of the bioplastic-producing "Knallgas" bacterium Ralstonia eutropha H16.

Pohlmann A, Fricke WF, Reinecke F, Kusian B, Liesegang H, Cramm R, Eitinger T, Ewering C, Pötter M, Schwartz E, Strittmatter A, Voss I, Gottschalk G, Steinbüchel A, Friedrich B, Bowien B.

Nat Biotechnol. 2006 Oct;24(10):1257-62. Epub 2006 Sep 10. Erratum in: Nat Biotechnol. 2007 Apr;25(4):478.

PMID:
16964242
43.

How to become a uropathogen: comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains.

Brzuszkiewicz E, Brüggemann H, Liesegang H, Emmerth M, Olschläger T, Nagy G, Albermann K, Wagner C, Buchrieser C, Emody L, Gottschalk G, Hacker J, Dobrindt U.

Proc Natl Acad Sci U S A. 2006 Aug 22;103(34):12879-84. Epub 2006 Aug 15.

44.

Escherichia coli induces DNA double-strand breaks in eukaryotic cells.

Nougayrède JP, Homburg S, Taieb F, Boury M, Brzuszkiewicz E, Gottschalk G, Buchrieser C, Hacker J, Dobrindt U, Oswald E.

Science. 2006 Aug 11;313(5788):848-51.

45.

Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536.

Hochhut B, Wilde C, Balling G, Middendorf B, Dobrindt U, Brzuszkiewicz E, Gottschalk G, Carniel E, Hacker J.

Mol Microbiol. 2006 Aug;61(3):584-95.

46.

Structural and functional characterization of three polyketide synthase gene clusters in Bacillus amyloliquefaciens FZB 42.

Chen XH, Vater J, Piel J, Franke P, Scholz R, Schneider K, Koumoutsi A, Hitzeroth G, Grammel N, Strittmatter AW, Gottschalk G, Süssmuth RD, Borriss R.

J Bacteriol. 2006 Jun;188(11):4024-36.

47.

The phosphate-starvation response of Bacillus licheniformis.

Hoi le T, Voigt B, Jürgen B, Ehrenreich A, Gottschalk G, Evers S, Feesche J, Maurer KH, Hecker M, Schweder T.

Proteomics. 2006 Jun;6(12):3582-601.

PMID:
16705752
48.
49.

The genome sequence of Methanosphaera stadtmanae reveals why this human intestinal archaeon is restricted to methanol and H2 for methane formation and ATP synthesis.

Fricke WF, Seedorf H, Henne A, Krüer M, Liesegang H, Hedderich R, Gottschalk G, Thauer RK.

J Bacteriol. 2006 Jan;188(2):642-58.

50.

The extracellular proteome of Bacillus licheniformis grown in different media and under different nutrient starvation conditions.

Voigt B, Schweder T, Sibbald MJ, Albrecht D, Ehrenreich A, Bernhardt J, Feesche J, Maurer KH, Gottschalk G, van Dijl JM, Hecker M.

Proteomics. 2006 Jan;6(1):268-81. Erratum in: Proteomics. 2006 Mar;6(5):1704-5.

PMID:
16317772

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