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Items: 20

1.

Microbial ecology perturbation in human IgA deficiency.

Fadlallah J, El Kafsi H, Sterlin D, Juste C, Parizot C, Dorgham K, Autaa G, Gouas D, Almeida M, Lepage P, Pons N, Le Chatelier E, Levenez F, Kennedy S, Galleron N, de Barros JP, Malphettes M, Galicier L, Boutboul D, Mathian A, Miyara M, Oksenhendler E, Amoura Z, Doré J, Fieschi C, Ehrlich SD, Larsen M, Gorochov G.

Sci Transl Med. 2018 May 2;10(439). pii: eaan1217. doi: 10.1126/scitranslmed.aan1217.

PMID:
29720448
2.

Gut microbiome influences efficacy of PD-1-based immunotherapy against epithelial tumors.

Routy B, Le Chatelier E, Derosa L, Duong CPM, Alou MT, Daillère R, Fluckiger A, Messaoudene M, Rauber C, Roberti MP, Fidelle M, Flament C, Poirier-Colame V, Opolon P, Klein C, Iribarren K, Mondragón L, Jacquelot N, Qu B, Ferrere G, Clémenson C, Mezquita L, Masip JR, Naltet C, Brosseau S, Kaderbhai C, Richard C, Rizvi H, Levenez F, Galleron N, Quinquis B, Pons N, Ryffel B, Minard-Colin V, Gonin P, Soria JC, Deutsch E, Loriot Y, Ghiringhelli F, Zalcman G, Goldwasser F, Escudier B, Hellmann MD, Eggermont A, Raoult D, Albiges L, Kroemer G, Zitvogel L.

Science. 2018 Jan 5;359(6371):91-97. doi: 10.1126/science.aan3706. Epub 2017 Nov 2.

PMID:
29097494
3.

Lactobacillus delbrueckii ssp. lactis and ssp. bulgaricus: a chronicle of evolution in action.

El Kafsi H, Binesse J, Loux V, Buratti J, Boudebbouze S, Dervyn R, Kennedy S, Galleron N, Quinquis B, Batto JM, Moumen B, Maguin E, van de Guchte M.

BMC Genomics. 2014 May 28;15:407. doi: 10.1186/1471-2164-15-407.

4.

Dietary intervention impact on gut microbial gene richness.

Cotillard A, Kennedy SP, Kong LC, Prifti E, Pons N, Le Chatelier E, Almeida M, Quinquis B, Levenez F, Galleron N, Gougis S, Rizkalla S, Batto JM, Renault P; ANR MicroObes consortium, Doré J, Zucker JD, Clément K, Ehrlich SD.

Nature. 2013 Aug 29;500(7464):585-8. doi: 10.1038/nature12480. Erratum in: Nature. 2013 Oct 24;502(7472)580.

PMID:
23985875
5.

Complete genome sequence of the highly hemolytic strain Bacillus cereus F837/76.

Auger S, Galleron N, Ségurens B, Dossat C, Bolotin A, Wincker P, Sorokin A.

J Bacteriol. 2012 Mar;194(6):1630. doi: 10.1128/JB.06719-11.

6.

Bacillus cytotoxicus sp. nov. is a novel thermotolerant species of the Bacillus cereus Group occasionally associated with food poisoning.

Guinebretière MH, Auger S, Galleron N, Contzen M, De Sarrau B, De Buyser ML, Lamberet G, Fagerlund A, Granum PE, Lereclus D, De Vos P, Nguyen-The C, Sorokin A.

Int J Syst Evol Microbiol. 2013 Jan;63(Pt 1):31-40. doi: 10.1099/ijs.0.030627-0. Epub 2012 Feb 10.

PMID:
22328607
7.

Complete genome sequence of the commensal Streptococcus salivarius strain JIM8777.

Guédon E, Delorme C, Pons N, Cruaud C, Loux V, Couloux A, Gautier C, Sanchez N, Layec S, Galleron N, Almeida M, van de Guchte M, Kennedy SP, Ehrlich SD, Gibrat JF, Wincker P, Renault P.

J Bacteriol. 2011 Sep;193(18):5024-5. doi: 10.1128/JB.05390-11. Epub 2011 Jul 8.

8.

The genetically remote pathogenic strain NVH391-98 of the Bacillus cereus group is representative of a cluster of thermophilic strains.

Auger S, Galleron N, Bidnenko E, Ehrlich SD, Lapidus A, Sorokin A.

Appl Environ Microbiol. 2008 Feb;74(4):1276-80. Epub 2007 Dec 21.

9.

Extending the Bacillus cereus group genomics to putative food-borne pathogens of different toxicity.

Lapidus A, Goltsman E, Auger S, Galleron N, Ségurens B, Dossat C, Land ML, Broussolle V, Brillard J, Guinebretiere MH, Sanchis V, Nguen-The C, Lereclus D, Richardson P, Wincker P, Weissenbach J, Ehrlich SD, Sorokin A.

Chem Biol Interact. 2008 Jan 30;171(2):236-49. Epub 2007 Mar 12.

PMID:
17434157
10.

Multiple-locus sequence typing analysis of Bacillus cereus and Bacillus thuringiensis reveals separate clustering and a distinct population structure of psychrotrophic strains.

Sorokin A, Candelon B, Guilloux K, Galleron N, Wackerow-Kouzova N, Ehrlich SD, Bourguet D, Sanchis V.

Appl Environ Microbiol. 2006 Feb;72(2):1569-78.

11.

Complete genome sequence of the industrial bacterium Bacillus licheniformis and comparisons with closely related Bacillus species.

Rey MW, Ramaiya P, Nelson BA, Brody-Karpin SD, Zaretsky EJ, Tang M, Lopez de Leon A, Xiang H, Gusti V, Clausen IG, Olsen PB, Rasmussen MD, Andersen JT, Jørgensen PL, Larsen TS, Sorokin A, Bolotin A, Lapidus A, Galleron N, Ehrlich SD, Berka RM.

Genome Biol. 2004;5(10):R77. Epub 2004 Sep 13.

12.

Genome sequence of Bacillus cereus and comparative analysis with Bacillus anthracis.

Ivanova N, Sorokin A, Anderson I, Galleron N, Candelon B, Kapatral V, Bhattacharyya A, Reznik G, Mikhailova N, Lapidus A, Chu L, Mazur M, Goltsman E, Larsen N, D'Souza M, Walunas T, Grechkin Y, Pusch G, Haselkorn R, Fonstein M, Ehrlich SD, Overbeek R, Kyrpides N.

Nature. 2003 May 1;423(6935):87-91.

PMID:
12721630
13.

Co-linear scaffold of the Bacillus licheniformis and Bacillus subtilis genomes and its use to compare their competence genes.

Lapidus A, Galleron N, Andersen JT, Jørgensen PL, Ehrlich SD, Sorokin A.

FEMS Microbiol Lett. 2002 Mar 19;209(1):23-30.

14.

The complete genome sequence of the gram-positive bacterium Bacillus subtilis.

Kunst F, Ogasawara N, Moszer I, Albertini AM, Alloni G, Azevedo V, Bertero MG, Bessières P, Bolotin A, Borchert S, Borriss R, Boursier L, Brans A, Braun M, Brignell SC, Bron S, Brouillet S, Bruschi CV, Caldwell B, Capuano V, Carter NM, Choi SK, Cordani JJ, Connerton IF, Cummings NJ, Daniel RA, Denziot F, Devine KM, Düsterhöft A, Ehrlich SD, Emmerson PT, Entian KD, Errington J, Fabret C, Ferrari E, Foulger D, Fritz C, Fujita M, Fujita Y, Fuma S, Galizzi A, Galleron N, Ghim SY, Glaser P, Goffeau A, Golightly EJ, Grandi G, Guiseppi G, Guy BJ, Haga K, Haiech J, Harwood CR, Hènaut A, Hilbert H, Holsappel S, Hosono S, Hullo MF, Itaya M, Jones L, Joris B, Karamata D, Kasahara Y, Klaerr-Blanchard M, Klein C, Kobayashi Y, Koetter P, Koningstein G, Krogh S, Kumano M, Kurita K, Lapidus A, Lardinois S, Lauber J, Lazarevic V, Lee SM, Levine A, Liu H, Masuda S, Mauël C, Médigue C, Medina N, Mellado RP, Mizuno M, Moestl D, Nakai S, Noback M, Noone D, O'Reilly M, Ogawa K, Ogiwara A, Oudega B, Park SH, Parro V, Pohl TM, Portelle D, Porwollik S, Prescott AM, Presecan E, Pujic P, Purnelle B, Rapoport G, Rey M, Reynolds S, Rieger M, Rivolta C, Rocha E, Roche B, Rose M, Sadaie Y, Sato T, Scanlan E, Schleich S, Schroeter R, Scoffone F, Sekiguchi J, Sekowska A, Seror SJ, Serror P, Shin BS, Soldo B, Sorokin A, Tacconi E, Takagi T, Takahashi H, Takemaru K, Takeuchi M, Tamakoshi A, Tanaka T, Terpstra P, Togoni A, Tosato V, Uchiyama S, Vandebol M, Vannier F, Vassarotti A, Viari A, Wambutt R, Wedler H, Weitzenegger T, Winters P, Wipat A, Yamamoto H, Yamane K, Yasumoto K, Yata K, Yoshida K, Yoshikawa HF, Zumstein E, Yoshikawa H, Danchin A.

Nature. 1997 Nov 20;390(6657):249-56.

PMID:
9384377
15.

Sequencing and functional annotation of the Bacillus subtilis genes in the 200 kb rrnB-dnaB region.

Lapidus A, Galleron N, Sorokin A, Ehrlich SD.

Microbiology. 1997 Nov;143 ( Pt 11):3431-41.

PMID:
9387221
17.

Sequence analysis of the Bacillus subtilis chromosome region between the serA and kdg loci cloned in a yeast artificial chromosome.

Sorokin A, Azevedo V, Zumstein E, Galleron N, Ehrlich SD, Serror P.

Microbiology. 1996 Aug;142 ( Pt 8):2005-16.

PMID:
8760912
18.

A new approach using multiplex long accurate PCR and yeast artificial chromosomes for bacterial chromosome mapping and sequencing.

Sorokin A, Lapidus A, Capuano V, Galleron N, Pujic P, Ehrlich SD.

Genome Res. 1996 May;6(5):448-53.

19.

Specificity of insertion of Tn1545 transposon family in Lactococcus lactis subsp. lactis.

Renault P, Nogrette JF, Galleron N, Godon JJ, Ehrlich SD.

Dev Biol Stand. 1995;85:535-41.

PMID:
8586228
20.

Insertion and amplification of foreign genes in the Lactococcus lactis subsp. lactis chromosome.

Chopin MC, Chopin A, Rouault A, Galleron N.

Appl Environ Microbiol. 1989 Jul;55(7):1769-74.

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