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Primary Renal Carcinoid - A Case Report.

O'Sullivan M, Gargan ML, Flynn R, Crowther S, Torreggiani W.

Ir Med J. 2018 Jan 10;111(1):677.


LRRK2 is a negative regulator of Mycobacterium tuberculosis phagosome maturation in macrophages.

Härtlova A, Herbst S, Peltier J, Rodgers A, Bilkei-Gorzo O, Fearns A, Dill BD, Lee H, Flynn R, Cowley SA, Davies P, Lewis PA, Ganley IG, Martinez J, Alessi DR, Reith AD, Trost M, Gutierrez MG.

EMBO J. 2018 Jun 15;37(12). pii: e98694. doi: 10.15252/embj.201798694. Epub 2018 May 22.


Regulation of Insulin Receptor Pathway and Glucose Metabolism by CD36 Signaling.

Samovski D, Dhule P, Pietka T, Jacome-Sosa M, Penrose E, Son NH, Flynn RC, Shoghi KI, Hyrc KL, Goldberg IJ, Gamazon ER, Abumrad NA.

Diabetes. 2018 May 10. pii: db171226. doi: 10.2337/db17-1226. [Epub ahead of print]


In response to: 'Thyroid hormone replacement - a counterblast to guidelines'.

Leese GP, Flynn RV, MacDonald TM, Schofield C, Mackie AD.

J R Coll Physicians Edinb. 2018 Mar;48(1):93. doi: 10.4997/JRCPE.2018.120. No abstract available.


External validation of ADO, DOSE, COTE and CODEX at predicting death in primary care patients with COPD using standard and machine learning approaches.

Morales DR, Flynn R, Zhang J, Trucco E, Quint JK, Zutis K.

Respir Med. 2018 May;138:150-155. doi: 10.1016/j.rmed.2018.04.003. Epub 2018 Apr 12.


What Is Lean Management in Health Care? Development of an Operational Definition for a Cochrane Systematic Review.

Rotter T, Plishka C, Lawal A, Harrison L, Sari N, Goodridge D, Flynn R, Chan J, Fiander M, Poksinska B, Willoughby K, Kinsman L.

Eval Health Prof. 2018 Jan 1:163278718756992. doi: 10.1177/0163278718756992. [Epub ahead of print]


MicroRNA-17-92 is required for T-cell and B-cell pathogenicity in chronic graft-versus-host disease in mice.

Wu Y, Schutt S, Paz K, Zhang M, Flynn RP, Bastian D, Sofi MH, Nguyen H, Dai M, Liu C, Chang YJ, Blazar BR, Yu XZ.

Blood. 2018 Apr 26;131(17):1974-1986. doi: 10.1182/blood-2017-06-789321. Epub 2018 Mar 12.


Does HIV pre-exposure prophylaxis use lead to a higher incidence of sexually transmitted infections? A case-crossover study of men who have sex with men in Los Angeles, California.

Beymer MR, DeVost MA, Weiss RE, Dierst-Davies R, Shover CL, Landovitz RJ, Beniasians C, Talan AJ, Flynn RP, Krysiak R, McLaughlin K, Bolan RK.

Sex Transm Infect. 2018 Feb 27. pii: sextrans-2017-053377. doi: 10.1136/sextrans-2017-053377. [Epub ahead of print]


Image guidance doses delivered during radiotherapy: Quantification, management, and reduction: Report of the AAPM Therapy Physics Committee Task Group 180.

Ding GX, Alaei P, Curran B, Flynn R, Gossman M, Mackie TR, Miften M, Morin R, Xu XG, Zhu TC.

Med Phys. 2018 May;45(5):e84-e99. doi: 10.1002/mp.12824. Epub 2018 Mar 24.


Tissue-selective effects of nucleolar stress and rDNA damage in developmental disorders.

Calo E, Gu B, Bowen ME, Aryan F, Zalc A, Liang J, Flynn RA, Swigut T, Chang HY, Attardi LD, Wysocka J.

Nature. 2018 Feb 1;554(7690):112-117. doi: 10.1038/nature25449. Epub 2018 Jan 24.


Murine chronic graft-versus-host disease proteome profiling discovers CCL15 as a novel biomarker in patients.

Du J, Flynn R, Paz K, Ren HG, Ogata Y, Zhang Q, Gafken PR, Storer BE, Roy NH, Burkhardt JK, Mathews W, Tolar J, Lee SJ, Blazar BR, Paczesny S.

Blood. 2018 Apr 12;131(15):1743-1754. doi: 10.1182/blood-2017-08-800623. Epub 2018 Jan 18.


SBRT to adrenal metastases provides high local control with minimal toxicity.

Plichta K, Camden N, Furqan M, Hejleh TA, Clamon GH, Zhang J, Flynn RT, Bhatia SK, Smith MC, Buatti JM, Allen BG.

Adv Radiat Oncol. 2017 Aug 4;2(4):581-587. doi: 10.1016/j.adro.2017.07.011. eCollection 2017 Oct-Dec.


Inhibition of NGLY1 Inactivates the Transcription Factor Nrf1 and Potentiates Proteasome Inhibitor Cytotoxicity.

Tomlin FM, Gerling-Driessen UIM, Liu YC, Flynn RA, Vangala JR, Lentz CS, Clauder-Muenster S, Jakob P, Mueller WF, Ordoñez-Rueda D, Paulsen M, Matsui N, Foley D, Rafalko A, Suzuki T, Bogyo M, Steinmetz LM, Radhakrishnan SK, Bertozzi CR.

ACS Cent Sci. 2017 Nov 22;3(11):1143-1155. doi: 10.1021/acscentsci.7b00224. Epub 2017 Oct 25.


Incidence of Visible Hematuria Among Antithrombotic Agents: A Systematic Review of Over 175,000 Patients.

Bhatt NR, Davis NF, Nolan WJ, Flynn RJ, McDermott T, Thomas AZ, Manecksha RP.

Urology. 2018 Apr;114:27-32. doi: 10.1016/j.urology.2017.11.023. Epub 2017 Nov 27.


Results from the post-exposure prophylaxis pilot program (P-QUAD) demonstration project in Los Angeles County.

Beymer MR, Kofron RM, Tseng CH, Bolan RK, Flynn RP, Sayles JM, Perez MJ, Jordan WC, Landovitz RJ.

Int J STD AIDS. 2018 May;29(6):557-562. doi: 10.1177/0956462417743158. Epub 2017 Nov 29.


The Treatment In Morning versus Evening (TIME) study: analysis of recruitment, follow-up and retention rates post-recruitment.

Rorie DA, Flynn RWV, Mackenzie IS, MacDonald TM, Rogers A.

Trials. 2017 Nov 23;18(1):557. doi: 10.1186/s13063-017-2318-4.


Author Reply.

Bhatt NR, Davis NF, Dalton DM, McDermott T, Flynn RJ, Thomas AZ, Manecksha RP.

Urology. 2018 Jan;111:237. doi: 10.1016/j.urology.2017.07.070. Epub 2017 Nov 20. No abstract available.


Design of a compact collimator and 3D imaging system for a scanning beam low-energy intraoperative radiation therapy system for pancreatic cancer.

Wears B, Mohiuddin I, Flynn R, Yusung Kim, Waldron T, Allen B, Junyi Xia.

Conf Proc IEEE Eng Med Biol Soc. 2017 Jul;2017:4325-4328. doi: 10.1109/EMBC.2017.8037813.


Metastability Gap in the Phase Diagram of Monoclonal IgG Antibody.

Rowe JB, Cancel RA, Evangelous TD, Flynn RP, Pechenov S, Subramony JA, Zhang J, Wang Y.

Biophys J. 2017 Oct 17;113(8):1750-1756. doi: 10.1016/j.bpj.2017.08.048.


Quantitative Analysis of Technological Innovation in Urology.

Bhatt NR, Davis NF, Dalton DM, McDermott T, Flynn RJ, Thomas AZ, Manecksha RP.

Urology. 2018 Jan;111:230-237. doi: 10.1016/j.urology.2017.07.068. Epub 2017 Oct 9.


Fasciola and fasciolosis in ruminants in Europe: Identifying research needs.

Beesley NJ, Caminade C, Charlier J, Flynn RJ, Hodgkinson JE, Martinez-Moreno A, Martinez-Valladares M, Perez J, Rinaldi L, Williams DJL.

Transbound Emerg Dis. 2018 May;65 Suppl 1:199-216. doi: 10.1111/tbed.12682. Epub 2017 Oct 6.


Alpha-synuclein induces the unfolded protein response in Parkinson's disease SNCA triplication iPSC-derived neurons.

Heman-Ackah SM, Manzano R, Hoozemans JJM, Scheper W, Flynn R, Haerty W, Cowley SA, Bassett AR, Wood MJA.

Hum Mol Genet. 2017 Nov 15;26(22):4441-4450. doi: 10.1093/hmg/ddx331.


Enhancer connectome in primary human cells identifies target genes of disease-associated DNA elements.

Mumbach MR, Satpathy AT, Boyle EA, Dai C, Gowen BG, Cho SW, Nguyen ML, Rubin AJ, Granja JM, Kazane KR, Wei Y, Nguyen T, Greenside PG, Corces MR, Tycko J, Simeonov DR, Suliman N, Li R, Xu J, Flynn RA, Kundaje A, Khavari PA, Marson A, Corn JE, Quertermous T, Greenleaf WJ, Chang HY.

Nat Genet. 2017 Nov;49(11):1602-1612. doi: 10.1038/ng.3963. Epub 2017 Sep 25.


Plasma Tenofovir Levels to Support Adherence to TDF/FTC Preexposure Prophylaxis for HIV Prevention in MSM in Los Angeles, California.

Landovitz RJ, Beymer M, Kofron R, Amico KR, Psaros C, Bushman L, Anderson PL, Flynn R, Lee DP, Bolan RK, Jordan WC, Tseng CH, Dierst-Davies R, Rooney J, Wohl AR.

J Acquir Immune Defic Syndr. 2017 Dec 15;76(5):501-511. doi: 10.1097/QAI.0000000000001538.


A rapid IL-17 response to Cryptosporidium parvum in the bovine intestine.

Drinkall E, Wass MJ, Coffey TJ, Flynn RJ.

Vet Immunol Immunopathol. 2017 Sep;191:1-4. doi: 10.1016/j.vetimm.2017.07.009. Epub 2017 Jul 23.


The Chronic Stages of Bovine Fasciola hepatica Are Dominated by CD4 T-Cell Exhaustion.

Sachdev D, Gough KC, Flynn RJ.

Front Immunol. 2017 Aug 21;8:1002. doi: 10.3389/fimmu.2017.01002. eCollection 2017.


Multisource Rotating Shield Brachytherapy Apparatus for Prostate Cancer.

Dadkhah H, Hopfensperger KM, Kim Y, Wu X, Flynn RT.

Int J Radiat Oncol Biol Phys. 2017 Nov 1;99(3):719-728. doi: 10.1016/j.ijrobp.2017.06.008. Epub 2017 Jun 20.


Implementation of respiratory-gated VMAT on a Versa HD linear accelerator.

Snyder JE, Flynn RT, Hyer DE.

J Appl Clin Med Phys. 2017 Sep;18(5):152-161. doi: 10.1002/acm2.12160. Epub 2017 Aug 18.


Phyllodes tumour of the urinary bladder: a report of a unique case.

Tchrakian N, Browne E, Shanks JH, Flynn RJ, Crowther S.

Histopathology. 2018 Jan;72(2):356-358. doi: 10.1111/his.13344. Epub 2017 Oct 24. No abstract available.


A prospective audit on the effect of training and educational workshops on the incidence of urethral catheterization injuries.

Bhatt NR, Davis NF, Quinlan MR, Flynn RJ, McDermott TED, Manecksha RP, Thornhill JA.

Can Urol Assoc J. 2017 Jul;11(7):E302-E306. doi: 10.5489/cuaj.4271. Epub 2017 Jul 11.


Fast dose optimization for rotating shield brachytherapy.

Cho M, Wu X, Dadkhah H, Yi J, Flynn RT, Kim Y, Xu W.

Med Phys. 2017 Oct;44(10):5384-5392. doi: 10.1002/mp.12486. Epub 2017 Sep 11.


Investigating Real-World Clopidogrel Pharmacogenetics in Stroke Using a Bioresource Linked to Electronic Medical Records.

Tornio A, Flynn R, Morant S, Velten E, Palmer CNA, MacDonald TM, Doney ASF.

Clin Pharmacol Ther. 2018 Feb;103(2):281-286. doi: 10.1002/cpt.780. Epub 2017 Sep 19.


Evaluation of a Client-Centered Linkage Intervention for Patients Newly Diagnosed with HIV at an Urban United States LGBT Center: The Linkage to Care Specialist Project.

Bendetson J, Dierst-Davies R, Flynn R, Beymer MR, Wohl AR, Amico KR, Bolan RK.

AIDS Patient Care STDS. 2017 Jul;31(7):283-289. doi: 10.1089/apc.2017.0057. Epub 2017 Jun 19.


An activated Th17-prone T cell subset involved in chronic graft-versus-host disease sensitive to pharmacological inhibition.

Forcade E, Paz K, Flynn R, Griesenauer B, Amet T, Li W, Liu L, Bakoyannis G, Jiang D, Chu HW, Lobera M, Yang J, Wilkes DS, Du J, Gartlan K, Hill GR, MacDonald KP, Espada EL, Blanco P, Serody JS, Koreth J, Cutler CS, Antin JH, Soiffer RJ, Ritz J, Paczesny S, Blazar BR.

JCI Insight. 2017 Jun 15;2(12). pii: 92111. doi: 10.1172/jci.insight.92111. [Epub ahead of print]


Neglect, educational success, and young people in out-of-home care: Cross-sectional and longitudinal analyses.

Tessier NG, O'Higgins A, Flynn RJ.

Child Abuse Negl. 2018 Jan;75:115-129. doi: 10.1016/j.chiabu.2017.06.005. Epub 2017 Jun 9.


Differentiating Nonoccupational Postexposure Prophylaxis Seroconverters and Non-Seroconverters in a Community-Based Clinic in Los Angeles, California.

Beymer MR, Weiss RE, Bolan RK, Kofron RM, Flynn RP, Pieribone DL, Kulkarni SP, Landovitz RJ.

Open Forum Infect Dis. 2017 Apr 4;4(2):ofx061. doi: 10.1093/ofid/ofx061. eCollection 2017 Spring.


Factors influencing practice variation in the management of nephrotic syndrome: a qualitative study of pediatric nephrology care providers.

Samuel SM, Flynn R, Zappitelli M, Dart A, Parekh R, Pinsk M, Mammen C, Wade A, Scott SD; Canadian Childhood Nephrotic Syndrome Project Team*.

CMAJ Open. 2017 Jun 7;5(2):E424-E430. doi: 10.9778/cmajo.20160078.


The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity.

Simsek D, Tiu GC, Flynn RA, Byeon GW, Leppek K, Xu AF, Chang HY, Barna M.

Cell. 2017 Jun 1;169(6):1051-1065.e18. doi: 10.1016/j.cell.2017.05.022.


Origins and evolution of innate lymphoid cells: Wardens of barrier immunity.

Neill DR, Flynn RJ.

Parasite Immunol. 2018 Feb;40(2). doi: 10.1111/pim.12436. Epub 2017 May 22. Review.


Invariant natural killer T cells ameliorate murine chronic GVHD by expanding donor regulatory T cells.

Du J, Paz K, Thangavelu G, Schneidawind D, Baker J, Flynn R, Duramad O, Feser C, Panoskaltsis-Mortari A, Negrin RS, Blazar BR.

Blood. 2017 Jun 8;129(23):3121-3125. doi: 10.1182/blood-2016-11-752444. Epub 2017 Apr 17.


Comparative Analysis Reveals Furoyl in Vivo Selective Hydroxyl Acylation Analyzed by Primer Extension Reagents Form Stable Ribosyl Ester Adducts.

Chan D, Feng C, Zhen Y, Flynn RA, Spitale RC.

Biochemistry. 2017 Apr 4;56(13):1811-1814. doi: 10.1021/acs.biochem.7b00128. Epub 2017 Mar 21.


Electronic case report forms and electronic data capture within clinical trials and pharmacoepidemiology.

Rorie DA, Flynn RWV, Grieve K, Doney A, Mackenzie I, MacDonald TM, Rogers A.

Br J Clin Pharmacol. 2017 Sep;83(9):1880-1895. doi: 10.1111/bcp.13285. Epub 2017 Apr 22. Review.


Pirfenidone ameliorates murine chronic GVHD through inhibition of macrophage infiltration and TGF-β production.

Du J, Paz K, Flynn R, Vulic A, Robinson TM, Lineburg KE, Alexander KA, Meng J, Roy S, Panoskaltsis-Mortari A, Loschi M, Hill GR, Serody JS, Maillard I, Miklos D, Koreth J, Cutler CS, Antin JH, Ritz J, MacDonald KP, Schacker TW, Luznik L, Blazar BR.

Blood. 2017 May 4;129(18):2570-2580. doi: 10.1182/blood-2017-01-758854. Epub 2017 Mar 2.


Myeloid-derived suppressor cell, arginase-1, IL-17 and cl-CD95L: an explosive cocktail in lupus?

Flynn RJ, Legembre P.

Ann Transl Med. 2016 Dec;4(24):554. doi: 10.21037/atm.2016.12.35. No abstract available.


CD95 and the MRL-lpr Mouse Model.

Flynn RJ.

Methods Mol Biol. 2017;1557:219-228. doi: 10.1007/978-1-4939-6780-3_21.


Acid-suppression medications and bacterial gastroenteritis: a population-based cohort study.

Wei L, Ratnayake L, Phillips G, McGuigan CC, Morant SV, Flynn RW, Mackenzie IS, MacDonald TM.

Br J Clin Pharmacol. 2017 Jun;83(6):1298-1308. doi: 10.1111/bcp.13205. Epub 2017 Jan 23.


Dispersion design in gradient index elements using ternary blends.

Mait JN, Beadie G, Flynn RA, Milojkovic P.

Opt Express. 2016 Dec 12;24(25):29295-29301. doi: 10.1364/OE.24.029295.


Comparison of SHAPE reagents for mapping RNA structures inside living cells.

Lee B, Flynn RA, Kadina A, Guo JK, Kool ET, Chang HY.

RNA. 2017 Feb;23(2):169-174. doi: 10.1261/rna.058784.116. Epub 2016 Nov 22.


Novel Gene Expression Profile of Women with Intrinsic Skin Youthfulness by Whole Transcriptome Sequencing.

Xu J, Spitale RC, Guan L, Flynn RA, Torre EA, Li R, Raber I, Qu K, Kern D, Knaggs HE, Chang HY, Chang AL.

PLoS One. 2016 Nov 9;11(11):e0165913. doi: 10.1371/journal.pone.0165913. eCollection 2016.

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