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Items: 1 to 50 of 224

1.

Effect of lower-energy, higher-fiber diets on pigs divergently selected for residual feed intake when fed higher-energy, lower-fiber diets.

Mauch ED, Young JM, Serão NVL, Hsu WL, Patience JF, Kerr BJ, Weber TE, Gabler NK, Dekkers JCM.

J Anim Sci. 2018 Apr 14;96(4):1221-1236. doi: 10.1093/jas/sky065.

PMID:
29669076
2.

Genomic prediction of piglet response to infection with one of two porcine reproductive and respiratory syndrome virus isolates.

Waide EH, Tuggle CK, Serão NVL, Schroyen M, Hess A, Rowland RRR, Lunney JK, Plastow G, Dekkers JCM.

Genet Sel Evol. 2018 Feb 1;50(1):3. doi: 10.1186/s12711-018-0371-4.

3.

Impact of Mycoplasma hyopneumoniae and Lawsonia intracellularis on the performance of pigs divergently selected for feed efficiency.

Helm ET, Outhouse AC, Schwartz KJ, Dekkers JCM, Lonergan SM, Rauw WM, Gabler NK.

J Anim Sci. 2018 Mar 6;96(2):462-472. doi: 10.1093/jas/skx074.

PMID:
29385478
4.

Transcriptome Analysis in Spleen Reveals Differential Regulation of Response to Newcastle Disease Virus in Two Chicken Lines.

Zhang J, Kaiser MG, Deist MS, Gallardo RA, Bunn DA, Kelly TR, Dekkers JCM, Zhou H, Lamont SJ.

Sci Rep. 2018 Jan 19;8(1):1278. doi: 10.1038/s41598-018-19754-8.

5.

Creating effective biocontainment facilities and maintenance protocols for raising specific pathogen-free, severe combined immunodeficient (SCID) pigs.

Powell EJ, Charley S, Boettcher AN, Varley L, Brown J, Schroyen M, Adur MK, Dekkers S, Isaacson D, Sauer M, Cunnick J, Ellinwood NM, Ross JW, Dekkers JC, Tuggle CK.

Lab Anim. 2018 Jan 1:23677217750691. doi: 10.1177/0023677217750691. [Epub ahead of print]

PMID:
29325489
6.

Resistant and susceptible chicken lines show distinctive responses to Newcastle disease virus infection in the lung transcriptome.

Deist MS, Gallardo RA, Bunn DA, Dekkers JCM, Zhou H, Lamont SJ.

BMC Genomics. 2017 Dec 28;18(1):989. doi: 10.1186/s12864-017-4380-4.

7.

Genomic regions associated with host response to porcine reproductive and respiratory syndrome vaccination and co-infection in nursery pigs.

Dunkelberger JR, Serão NVL, Weng Z, Waide EH, Niederwerder MC, Kerrigan MA, Lunney JK, Rowland RRR, Dekkers JCM.

BMC Genomics. 2017 Nov 13;18(1):865. doi: 10.1186/s12864-017-4182-8.

8.

Effects of Diet and Genetics on Growth Performance of Pigs in Response to Repeated Exposure to Heat Stress.

Rauw WM, Mayorga EJ, Lei SM, Dekkers JCM, Patience JF, Gabler NK, Lonergan SM, Baumgard LH.

Front Genet. 2017 Oct 26;8:155. doi: 10.3389/fgene.2017.00155. eCollection 2017.

9.

Identifying the genetic basis for resistance to avian influenza in commercial egg layer chickens.

Drobik-Czwarno W, Wolc A, Fulton JE, Arango J, Jankowski T, O'Sullivan NP, Dekkers JCM.

Animal. 2017 Nov 6:1-9. doi: 10.1017/S1751731117002889. [Epub ahead of print]

PMID:
29103391
10.

A Hypothesis and Review of the Relationship between Selection for Improved Production Efficiency, Coping Behavior, and Domestication.

Rauw WM, Johnson AK, Gomez-Raya L, Dekkers JCM.

Front Genet. 2017 Sep 28;8:134. doi: 10.3389/fgene.2017.00134. eCollection 2017.

11.

The genetic and biological basis of feed efficiency in mid-lactation Holstein dairy cows.

Hardie LC, VandeHaar MJ, Tempelman RJ, Weigel KA, Armentano LE, Wiggans GR, Veerkamp RF, de Haas Y, Coffey MP, Connor EE, Hanigan MD, Staples C, Wang Z, Dekkers JCM, Spurlock DM.

J Dairy Sci. 2017 Nov;100(11):9061-9075. doi: 10.3168/jds.2017-12604. Epub 2017 Aug 23.

PMID:
28843688
12.

T Cell Lymphoma and Leukemia in Severe Combined Immunodeficiency Pigs following Bone Marrow Transplantation: A Case Report.

Powell EJ, Graham J, Ellinwood NM, Hostetter J, Yaeger M, Ho CS, Gault L, Norlin V, Snella EN, Jens J, Waide EH, Boettcher AN, Kerrigan M, Rowland RRR, Ross JW, Dekkers JCM, Tuggle CK.

Front Immunol. 2017 Jul 12;8:813. doi: 10.3389/fimmu.2017.00813. eCollection 2017.

13.

A major gene for host response to porcine reproductive and respiratory syndrome is not unfavorably associated with overall performance under nonchallenging conditions in commercial pig lines.

Dunkelberger JR, Mathur PK, Lopes MS, Knol EF, Dekkers JCM.

J Anim Sci. 2017 Jul;95(7):2838-2847. doi: 10.2527/jas.2017.1524.

PMID:
28727104
14.

A high-quality annotated transcriptome of swine peripheral blood.

Liu H, Smith TPL, Nonneman DJ, Dekkers JCM, Tuggle CK.

BMC Genomics. 2017 Jun 24;18(1):479. doi: 10.1186/s12864-017-3863-7.

15.

Antigenic and Biological Characterization of ORF2-6 Variants at Early Times Following PRRSV Infection.

Evans AB, Loyd H, Dunkelberger JR, van Tol S, Bolton MJ, Dorman KS, Dekkers JCM, Carpenter S.

Viruses. 2017 May 16;9(5). pii: E113. doi: 10.3390/v9050113.

16.

Use of multi-trait and random regression models to identify genetic variation in tolerance to porcine reproductive and respiratory syndrome virus.

Lough G, Rashidi H, Kyriazakis I, Dekkers JCM, Hess A, Hess M, Deeb N, Kause A, Lunney JK, Rowland RRR, Mulder HA, Doeschl-Wilson A.

Genet Sel Evol. 2017 Apr 19;49(1):37. doi: 10.1186/s12711-017-0312-7.

17.

Genetic architecture of gene expression underlying variation in host response to porcine reproductive and respiratory syndrome virus infection.

Kommadath A, Bao H, Choi I, Reecy JM, Koltes JE, Fritz-Waters E, Eisley CJ, Grant JR, Rowland RR, Tuggle CK, Dekkers JC, Lunney JK, Guan LL, Stothard P, Plastow GS.

Sci Rep. 2017 Apr 10;7:46203. doi: 10.1038/srep46203.

18.
19.

Novel Mechanisms Revealed in the Trachea Transcriptome of Resistant and Susceptible Chicken Lines following Infection with Newcastle Disease Virus.

Deist MS, Gallardo RA, Bunn DA, Kelly TR, Dekkers JCM, Zhou H, Lamont SJ.

Clin Vaccine Immunol. 2017 May 5;24(5). pii: e00027-17. doi: 10.1128/CVI.00027-17. Print 2017 May.

20.

Repeatability vs. multiple-trait models to evaluate shell dynamic stiffness for layer chickens.

Wolc A, Arango J, Settar P, O'Sullivan NP, Dekkers JC.

J Anim Sci. 2017 Jan;95(1):9-15. doi: 10.2527/jas.2016.0618.

PMID:
28177371
21.

Genomewide association of piglet responses to infection with one of two porcine reproductive and respiratory syndrome virus isolates.

Waide EH, Tuggle CK, Serão NV, Schroyen M, Hess A, Rowland RR, Lunney JK, Plastow G, Dekkers JC.

J Anim Sci. 2017 Jan;95(1):16-38. doi: 10.2527/jas.2016.0874.

PMID:
28177360
22.

Pigs with Severe Combined Immunodeficiency Are Impaired in Controlling Influenza A Virus Infection.

Rajao DS, Loving CL, Waide EH, Gauger PC, Dekkers JC, Tuggle CK, Vincent AL.

J Innate Immun. 2017;9(2):193-202. doi: 10.1159/000451007. Epub 2016 Dec 17.

23.

Estimation of genetic parameters for traits associated with reproduction, lactation, and efficiency in sows.

Thekkoot DM, Kemp RA, Rothschild MF, Plastow GS, Dekkers JC.

J Anim Sci. 2016 Nov;94(11):4516-4529. doi: 10.2527/jas.2015-0255.

PMID:
27898935
24.

Effect of selection for residual feed intake during the grow/finish phase of production on sow reproductive performance and lactation efficiency.

Young JM, Bergsma R, Knol EF, Patience JF, Dekkers JC.

J Anim Sci. 2016 Oct;94(10):4120-4132. doi: 10.2527/jas.2015-0130.

PMID:
27898858
25.

Genetic and genomic basis of antibody response to porcine reproductive and respiratory syndrome (PRRS) in gilts and sows.

Serão NV, Kemp RA, Mote BE, Willson P, Harding JC, Bishop SC, Plastow GS, Dekkers JC.

Genet Sel Evol. 2016 Jul 14;48(1):51. doi: 10.1186/s12711-016-0230-0.

26.

Impact of fitting dominance and additive effects on accuracy of genomic prediction of breeding values in layers.

Heidaritabar M, Wolc A, Arango J, Zeng J, Settar P, Fulton JE, O'Sullivan NP, Bastiaansen JW, Fernando RL, Garrick DJ, Dekkers JC.

J Anim Breed Genet. 2016 Oct;133(5):334-46. doi: 10.1111/jbg.12225. Epub 2016 Jun 30.

PMID:
27357473
27.

Comparison of host genetic factors influencing pig response to infection with two North American isolates of porcine reproductive and respiratory syndrome virus.

Hess AS, Islam Z, Hess MK, Rowland RR, Lunney JK, Doeschl-Wilson A, Plastow GS, Dekkers JC.

Genet Sel Evol. 2016 Jun 20;48(1):43. doi: 10.1186/s12711-016-0222-0.

28.

Genomewide association analysis of sow lactation performance traits in lines of Yorkshire pigs divergently selected for residual feed intake during grow-finish phase.

Thekkoot DM, Young JM, Rothschild MF, Dekkers JC.

J Anim Sci. 2016 Jun;94(6):2317-31. doi: 10.2527/jas.2015-0258.

PMID:
27285909
29.

NK cells are intrinsically functional in pigs with Severe Combined Immunodeficiency (SCID) caused by spontaneous mutations in the Artemis gene.

Powell EJ, Cunnick JE, Knetter SM, Loving CL, Waide EH, Dekkers JC, Tuggle CK.

Vet Immunol Immunopathol. 2016 Jul;175:1-6. doi: 10.1016/j.vetimm.2016.04.008. Epub 2016 Apr 19.

30.

Identification of potential serum biomarkers to predict feed efficiency in young pigs.

Grubbs JK, Dekkers JC, Huff-Lonergan E, Tuggle CK, Lonergan SM.

J Anim Sci. 2016 Apr;94(4):1482-92. doi: 10.2527/jas.2015-9692.

PMID:
27136007
31.

Genome-Wide Association Study Singles Out SCD and LEPR as the Two Main Loci Influencing Intramuscular Fat Content and Fatty Acid Composition in Duroc Pigs.

Ros-Freixedes R, Gol S, Pena RN, Tor M, Ibáñez-Escriche N, Dekkers JC, Estany J.

PLoS One. 2016 Mar 29;11(3):e0152496. doi: 10.1371/journal.pone.0152496. eCollection 2016.

32.

Effects of number of training generations on genomic prediction for various traits in a layer chicken population.

Weng Z, Wolc A, Shen X, Fernando RL, Dekkers JC, Arango J, Settar P, Fulton JE, O'Sullivan NP, Garrick DJ.

Genet Sel Evol. 2016 Mar 19;48:22. doi: 10.1186/s12711-016-0198-9.

33.

Bioinformatic analyses in early host response to Porcine Reproductive and Respiratory Syndrome virus (PRRSV) reveals pathway differences between pigs with alternate genotypes for a major host response QTL.

Schroyen M, Eisley C, Koltes JE, Fritz-Waters E, Choi I, Plastow GS, Guan L, Stothard P, Bao H, Kommadath A, Reecy JM, Lunney JK, Rowland RR, Dekkers JC, Tuggle CK.

BMC Genomics. 2016 Mar 8;17:196. doi: 10.1186/s12864-016-2547-z.

34.

Mixture models detect large effect QTL better than GBLUP and result in more accurate and persistent predictions.

Wolc A, Arango J, Settar P, Fulton JE, O'Sullivan NP, Dekkers JC, Fernando R, Garrick DJ.

J Anim Sci Biotechnol. 2016 Feb 11;7:7. doi: 10.1186/s40104-016-0066-z. eCollection 2016.

35.

Post-weaning blood transcriptomic differences between Yorkshire pigs divergently selected for residual feed intake.

Liu H, Nguyen YT, Nettleton D, Dekkers JC, Tuggle CK.

BMC Genomics. 2016 Jan 22;17:73. doi: 10.1186/s12864-016-2395-x.

37.

Not All SCID Pigs Are Created Equally: Two Independent Mutations in the Artemis Gene Cause SCID in Pigs.

Waide EH, Dekkers JC, Ross JW, Rowland RR, Wyatt CR, Ewen CL, Evans AB, Thekkoot DM, Boddicker NJ, Serão NV, Ellinwood NM, Tuggle CK.

J Immunol. 2015 Oct 1;195(7):3171-9. doi: 10.4049/jimmunol.1501132. Epub 2015 Aug 28.

38.

Whole blood microarray analysis of pigs showing extreme phenotypes after a porcine reproductive and respiratory syndrome virus infection.

Schroyen M, Steibel JP, Koltes JE, Choi I, Raney NE, Eisley C, Fritz-Waters E, Reecy JM, Dekkers JC, Rowland RR, Lunney JK, Ernst CW, Tuggle CK.

BMC Genomics. 2015 Jul 10;16:516. doi: 10.1186/s12864-015-1741-8.

39.

Response and inbreeding from a genomic selection experiment in layer chickens.

Wolc A, Zhao HH, Arango J, Settar P, Fulton JE, O'Sullivan NP, Preisinger R, Stricker C, Habier D, Fernando RL, Garrick DJ, Lamont SJ, Dekkers JC.

Genet Sel Evol. 2015 Jul 7;47:59. doi: 10.1186/s12711-015-0133-5.

40.

Assessing peripheral blood cell profile of Yorkshire pigs divergently selected for residual feed intake.

Mpetile Z, Young JM, Gabler NK, Dekkers JC, Tuggle CK.

J Anim Sci. 2015 Mar;93(3):892-9. doi: 10.2527/jas.2014-8132.

PMID:
26020867
41.

Composition and quality characteristics of carcasses from pigs divergently selected for residual feed intake on high- or low-energy diets.

Arkfeld EK, Young JM, Johnson RC, Fedler CA, Prusa K, Patience JF, Dekkers JC, Gabler NK, Lonergan SM, Huff-Lonergan E.

J Anim Sci. 2015 May;93(5):2530-45. doi: 10.2527/jas.2014-8546.

PMID:
26020348
42.

Investigation of the efficacy of albumin removal procedures on porcine serum proteome profile.

Grubbs JK, Tuggle CK, Dekkers JC, Boddicker NJ, Nguyen YT, Huff-Lonergan E, Nettleton D, Lonergan SM.

J Anim Sci. 2015 Apr;93(4):1592-8. doi: 10.2527/jas.2014-8559.

PMID:
26020181
43.

Identification of a putative quantitative trait nucleotide in guanylate binding protein 5 for host response to PRRS virus infection.

Koltes JE, Fritz-Waters E, Eisley CJ, Choi I, Bao H, Kommadath A, Serão NV, Boddicker NJ, Abrams SM, Schroyen M, Loyd H, Tuggle CK, Plastow GS, Guan L, Stothard P, Lunney JK, Liu P, Carpenter S, Rowland RR, Dekkers JC, Reecy JM.

BMC Genomics. 2015 May 28;16:412. doi: 10.1186/s12864-015-1635-9.

44.

Linkage disequilibrium in crossbred and pure line chickens.

Fu W, Dekkers JC, Lee WR, Abasht B.

Genet Sel Evol. 2015 Feb 26;47:11. doi: 10.1186/s12711-015-0098-4.

45.

Analysis of blood leukocytes in a naturally occurring immunodeficiency of pigs shows the defect is localized to B and T cells.

Ewen CL, Cino-Ozuna AG, He H, Kerrigan MA, Dekkers JC, Tuggle CK, Rowland RR, Wyatt CR.

Vet Immunol Immunopathol. 2014 Dec 15;162(3-4):174-9. doi: 10.1016/j.vetimm.2014.10.003. Epub 2014 Oct 14.

PMID:
25454085
46.

Porcine reproductive and respiratory syndrome virus replication and quasispecies evolution in pigs that lack adaptive immunity.

Chen N, Dekkers JC, Ewen CL, Rowland RR.

Virus Res. 2015 Jan 2;195:246-9. doi: 10.1016/j.virusres.2014.10.006. Epub 2014 Oct 14.

PMID:
25451069
47.

Applied animal genomics: results from the field.

Van Eenennaam AL, Weigel KA, Young AE, Cleveland MA, Dekkers JC.

Annu Rev Anim Biosci. 2014 Feb;2:105-39. doi: 10.1146/annurev-animal-022513-114119. Epub 2013 Dec 2. Review.

PMID:
25384137
48.

A class of Bayesian methods to combine large numbers of genotyped and non-genotyped animals for whole-genome analyses.

Fernando RL, Dekkers JC, Garrick DJ.

Genet Sel Evol. 2014 Sep 22;46:50. doi: 10.1186/1297-9686-46-50.

49.

A least squares regression model to detect quantitative trait Loci with polar overdominance in a cross of outbred breeds: simulation.

Kim JJ, Dekkers JC.

Asian-Australas J Anim Sci. 2013 Nov;26(11):1536-44. doi: 10.5713/ajas.2013.13356.

50.

Total cost estimation for implementing genome-enabled selection in a multi-level swine production system.

Abell CE, Dekkers JC, Rothschild MF, Mabry JW, Stalder KJ.

Genet Sel Evol. 2014 May 19;46:32. doi: 10.1186/1297-9686-46-32.

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