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Items: 1 to 50 of 51

1.

Development of highly sensitive fluorescent probes for the detection of β-galactosidase activity - application to the real-time monitoring of senescence in live cells.

Safir Filho M, Dao P, Gesson M, Martin AR, Benhida R.

Analyst. 2018 May 18. doi: 10.1039/c8an00516h. [Epub ahead of print]

PMID:
29774897
2.

Expanding severe acute respiratory infection (SARI) surveillance beyond influenza: The process and data from 1 year of implementation in Vietnam.

Alroy KA, Do TT, Tran PD, Dang TQ, Vu LN, Le NTH, Dang AD, Ngu ND, Ngo TH, Hoang PMV, Phan LT, Nguyen TV, Nguyen LT, Nguyen TV, Vien MQ, Le HX, Dao AT, Nguyen TB, Pham DT, Nguyen VTT, Pham TN, Phan BH, Whitaker B, Do TTT, Dao PA, Balajee SA, Mounts AW.

Influenza Other Respir Viruses. 2018 May 13. doi: 10.1111/irv.12571. [Epub ahead of print]

3.

Microwave-Assisted Cyclization under Mildly Basic Conditions: Synthesis of 6 H-Benzo[ c]chromen-6-ones and Their 7,8,9,10-Tetrahydro Analogues.

Dao PDQ, Ho SL, Lim HJ, Cho CS.

J Org Chem. 2018 Apr 6;83(7):4140-4146. doi: 10.1021/acs.joc.8b00048. Epub 2018 Mar 26.

PMID:
29564893
4.

BeWith: A Between-Within method to discover relationships between cancer modules via integrated analysis of mutual exclusivity, co-occurrence and functional interactions.

Dao P, Kim YA, Wojtowicz D, Madan S, Sharan R, Przytycka TM.

PLoS Comput Biol. 2017 Oct 12;13(10):e1005695. doi: 10.1371/journal.pcbi.1005695. eCollection 2017 Oct.

5.

Pilot Validation of Ambulatory Activity Monitors for Sleep Measurement in Huntington's Disease Gene Carriers.

Maskevich S, Jumabhoy R, Dao PDM, Stout JC, Drummond SPA.

J Huntingtons Dis. 2017;6(3):249-253. doi: 10.3233/JHD-170251.

PMID:
28968241
6.

HIT'nDRIVE: patient-specific multidriver gene prioritization for precision oncology.

Shrestha R, Hodzic E, Sauerwald T, Dao P, Wang K, Yeung J, Anderson S, Vandin F, Haffari G, Collins CC, Sahinalp SC.

Genome Res. 2017 Sep;27(9):1573-1588. doi: 10.1101/gr.221218.117. Epub 2017 Jul 18.

7.

Synthesis of novel 1,2,4-triazine scaffold as FAK inhibitors with antitumor activity.

Dao P, Lietha D, Etheve-Quelquejeu M, Garbay C, Chen H.

Bioorg Med Chem Lett. 2017 Apr 15;27(8):1727-1730. doi: 10.1016/j.bmcl.2017.02.072. Epub 2017 Feb 28.

PMID:
28284808
8.

Development of Phenothiazine-Based Theranostic Compounds That Act Both as Inhibitors of β-Amyloid Aggregation and as Imaging Probes for Amyloid Plaques in Alzheimer's Disease.

Dao P, Ye F, Liu Y, Du ZY, Zhang K, Dong CZ, Meunier B, Chen H.

ACS Chem Neurosci. 2017 Apr 19;8(4):798-806. doi: 10.1021/acschemneuro.6b00380. Epub 2017 Feb 2.

PMID:
28097868
9.

(129)Xe NMR Relaxation-Based Macromolecular Sensing.

Gomes MD, Dao P, Jeong K, Slack CC, Vassiliou CC, Finbloom JA, Francis MB, Wemmer DE, Pines A.

J Am Chem Soc. 2016 Aug 10;138(31):9747-50. doi: 10.1021/jacs.6b02758. Epub 2016 Jul 29.

PMID:
27472048
10.

AptaTRACE Elucidates RNA Sequence-Structure Motifs from Selection Trends in HT-SELEX Experiments.

Dao P, Hoinka J, Takahashi M, Zhou J, Ho M, Wang Y, Costa F, Rossi JJ, Backofen R, Burnett J, Przytycka TM.

Cell Syst. 2016 Jul;3(1):62-70. doi: 10.1016/j.cels.2016.07.003.

11.

Ups and Downs of Poised RNA Polymerase II in B-Cells.

Dao P, Wojtowicz D, Nelson S, Levens D, Przytycka TM.

PLoS Comput Biol. 2016 Apr 14;12(4):e1004821. doi: 10.1371/journal.pcbi.1004821. eCollection 2016 Apr.

12.

Constituents of the Stem of Nauclea orientalis.

Dao PT, Quan TL, Mai NT.

Nat Prod Commun. 2015 Nov;10(11):1901-3.

PMID:
26749820
13.

AptaGUI-A Graphical User Interface for the Efficient Analysis of HT-SELEX Data.

Hoinka J, Dao P, Przytycka TM.

Mol Ther Nucleic Acids. 2015 Oct 13;4:e257. doi: 10.1038/mtna.2015.26. No abstract available.

14.

Investigation of DOTA-Metal Chelation Effects on the Chemical Shift of (129) Xe.

Jeong K, Slack CC, Vassiliou CC, Dao P, Gomes MD, Kennedy DJ, Truxal AE, Sperling LJ, Francis MB, Wemmer DE, Pines A.

Chemphyschem. 2015 Dec 1;16(17):3573-7. doi: 10.1002/cphc.201500806. Epub 2015 Oct 7.

PMID:
26376768
15.

MEMCover: integrated analysis of mutual exclusivity and functional network reveals dysregulated pathways across multiple cancer types.

Kim YA, Cho DY, Dao P, Przytycka TM.

Bioinformatics. 2015 Jun 15;31(12):i284-92. doi: 10.1093/bioinformatics/btv247.

16.

Large scale analysis of the mutational landscape in HT-SELEX improves aptamer discovery.

Hoinka J, Berezhnoy A, Dao P, Sauna ZE, Gilboa E, Przytycka TM.

Nucleic Acids Res. 2015 Jul 13;43(12):5699-707. doi: 10.1093/nar/gkv308. Epub 2015 Apr 13.

17.

Restoration of TRAIL-induced apoptosis in resistant human pancreatic cancer cells by a novel FAK inhibitor, PH11.

Dao P, Smith N, Scott-Algara D, Garbay C, Herbeuval JP, Chen H.

Cancer Lett. 2015 Apr 28;360(1):48-59. doi: 10.1016/j.canlet.2015.02.016. Epub 2015 Feb 12.

PMID:
25684663
18.

Design, synthesis, and evaluation of novel imidazo[1,2-a][1,3,5]triazines and their derivatives as focal adhesion kinase inhibitors with antitumor activity.

Dao P, Smith N, Tomkiewicz-Raulet C, Yen-Pon E, Camacho-Artacho M, Lietha D, Herbeuval JP, Coumoul X, Garbay C, Chen H.

J Med Chem. 2015 Jan 8;58(1):237-51. doi: 10.1021/jm500784e. Epub 2014 Sep 11.

PMID:
25180654
19.

Changes in inertia and effect on turning effort across different wheelchair configurations.

Caspall JJ, Seligsohn E, Dao PV, Sprigle S.

J Rehabil Res Dev. 2013;50(10):1353-62. doi: 10.1682/JRRD.2012.12.0219.

20.

Inhibition of both focal adhesion kinase and fibroblast growth factor receptor 2 pathways induces anti-tumor and anti-angiogenic activities.

Dao P, Jarray R, Smith N, Lepelletier Y, Le Coq J, Lietha D, Hadj-Slimane R, Herbeuval JP, Garbay C, Raynaud F, Chen H.

Cancer Lett. 2014 Jun 28;348(1-2):88-99. doi: 10.1016/j.canlet.2014.03.007. Epub 2014 Mar 19.

PMID:
24657306
21.

Activation of RhoA/Rho-kinase pathway accounts for pulmonary endothelial dysfunction in patients with chronic obstructive pulmonary disease.

Bei Y, Duong-Quy S, Hua-Huy T, Dao P, Le-Dong NN, Dinh-Xuan AT.

Physiol Rep. 2013 Oct;1(5):e00105. doi: 10.1002/phy2.105. Epub 2013 Oct 20.

22.

Partitioning kinetic energy during freewheeling wheelchair maneuvers.

Medola FO, Dao PV, Caspall JJ, Sprigle S.

IEEE Trans Neural Syst Rehabil Eng. 2014 Mar;22(2):326-33.

PMID:
24235308
23.

ORMAN: optimal resolution of ambiguous RNA-Seq multimappings in the presence of novel isoforms.

Dao P, Numanagić I, Lin YY, Hach F, Karakoc E, Donmez N, Collins C, Eichler EE, Sahinalp SC.

Bioinformatics. 2014 Mar 1;30(5):644-51. doi: 10.1093/bioinformatics/btt591. Epub 2013 Oct 15.

PMID:
24130305
24.

Whole-transcriptome profiling of thyroid nodules identifies expression-based signatures for accurate thyroid cancer diagnosis.

Wiseman SM, Haddad Z, Walker B, Vergara IA, Sierocinski T, Crisan A, Ghadessi M, Dao P, Zimmermann B, Triche TJ, Erho N, Davicioni E.

J Clin Endocrinol Metab. 2013 Oct;98(10):4072-9. doi: 10.1210/jc.2013-1991. Epub 2013 Aug 8.

PMID:
23928671
25.

Synthesis of novel diarylamino-1,3,5-triazine derivatives as FAK inhibitors with anti-angiogenic activity.

Dao P, Jarray R, Le Coq J, Lietha D, Loukaci A, Lepelletier Y, Hadj-Slimane R, Garbay C, Raynaud F, Chen H.

Bioorg Med Chem Lett. 2013 Aug 15;23(16):4552-6. doi: 10.1016/j.bmcl.2013.06.038. Epub 2013 Jun 24.

PMID:
23845217
26.

Test method for empirically determining inertial properties of manual wheelchairs.

Eicholtz MR, Caspall JJ, Dao PV, Sprigle S, Ferri A.

J Rehabil Res Dev. 2012;49(1):51-62.

27.

Optimally discriminative subnetwork markers predict response to chemotherapy.

Dao P, Wang K, Collins C, Ester M, Lapuk A, Sahinalp SC.

Bioinformatics. 2011 Jul 1;27(13):i205-13. doi: 10.1093/bioinformatics/btr245.

28.

Mapping the protein interaction network in methicillin-resistant Staphylococcus aureus.

Cherkasov A, Hsing M, Zoraghi R, Foster LJ, See RH, Stoynov N, Jiang J, Kaur S, Lian T, Jackson L, Gong H, Swayze R, Amandoron E, Hormozdiari F, Dao P, Sahinalp C, Santos-Filho O, Axerio-Cilies P, Byler K, McMaster WR, Brunham RC, Finlay BB, Reiner NE.

J Proteome Res. 2011 Mar 4;10(3):1139-50. doi: 10.1021/pr100918u. Epub 2011 Jan 28.

PMID:
21166474
29.

Alu repeat discovery and characterization within human genomes.

Hormozdiari F, Alkan C, Ventura M, Hajirasouliha I, Malig M, Hach F, Yorukoglu D, Dao P, Bakhshi M, Sahinalp SC, Eichler EE.

Genome Res. 2011 Jun;21(6):840-9. doi: 10.1101/gr.115956.110. Epub 2010 Dec 3.

30.

Applicability domains for classification problems: Benchmarking of distance to models for Ames mutagenicity set.

Sushko I, Novotarskyi S, Körner R, Pandey AK, Cherkasov A, Li J, Gramatica P, Hansen K, Schroeter T, Müller KR, Xi L, Liu H, Yao X, Öberg T, Hormozdiari F, Dao P, Sahinalp C, Todeschini R, Polishchuk P, Artemenko A, Kuz'min V, Martin TM, Young DM, Fourches D, Muratov E, Tropsha A, Baskin I, Horvath D, Marcou G, Muller C, Varnek A, Prokopenko VV, Tetko IV.

J Chem Inf Model. 2010 Dec 27;50(12):2094-111. doi: 10.1021/ci100253r. Epub 2010 Oct 29.

PMID:
21033656
31.

Inferring cancer subnetwork markers using density-constrained biclustering.

Dao P, Colak R, Salari R, Moser F, Davicioni E, Schönhuth A, Ester M.

Bioinformatics. 2010 Sep 15;26(18):i625-31. doi: 10.1093/bioinformatics/btq393.

32.

Increased Rho-kinase expression and activity and pulmonary endothelial dysfunction in smokers with normal lung function.

Duong-Quy S, Dao P, Hua-Huy T, Guilluy C, Pacaud P, Dinh-Xuan AT.

Eur Respir J. 2011 Feb;37(2):349-55. doi: 10.1183/09031936.00056610. Epub 2010 Jun 7.

33.

Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery.

Hormozdiari F, Hajirasouliha I, Dao P, Hach F, Yorukoglu D, Alkan C, Eichler EE, Sahinalp SC.

Bioinformatics. 2010 Jun 15;26(12):i350-7. doi: 10.1093/bioinformatics/btq216.

34.

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes.

Yu NY, Wagner JR, Laird MR, Melli G, Rey S, Lo R, Dao P, Sahinalp SC, Ester M, Foster LJ, Brinkman FS.

Bioinformatics. 2010 Jul 1;26(13):1608-15. doi: 10.1093/bioinformatics/btq249. Epub 2010 May 13.

35.

Endocrine response after severe subarachnoid hemorrhage related to sodium and blood volume regulation.

Audibert G, Steinmann G, de Talancé N, Laurens MH, Dao P, Baumann A, Longrois D, Mertes PM.

Anesth Analg. 2009 Jun;108(6):1922-8. doi: 10.1213/ane.0b013e31819a85ae.

PMID:
19448223
36.

Biomolecular network motif counting and discovery by color coding.

Alon N, Dao P, Hajirasouliha I, Hormozdiari F, Sahinalp SC.

Bioinformatics. 2008 Jul 1;24(13):i241-9. doi: 10.1093/bioinformatics/btn163.

37.

Inability of real-time reverse transcriptase PCR assay to detect subtype H7 avian influenza viruses isolated from wild birds.

Xing Z, Cardona C, Dao P, Crossley B, Hietala S, Boyce W.

J Clin Microbiol. 2008 May;46(5):1844-6. doi: 10.1128/JCM.02426-07. Epub 2008 Mar 5.

38.

Combinatorial QSAR modeling of chemical toxicants tested against Tetrahymena pyriformis.

Zhu H, Tropsha A, Fourches D, Varnek A, Papa E, Gramatica P, Oberg T, Dao P, Cherkasov A, Tetko IV.

J Chem Inf Model. 2008 Apr;48(4):766-84. doi: 10.1021/ci700443v. Epub 2008 Mar 1.

PMID:
18311912
39.

Dynamics of total, linear nonintegrated, and integrated HIV-1 DNA in vivo and in vitro.

Koelsch KK, Liu L, Haubrich R, May S, Havlir D, Günthard HF, Ignacio CC, Campos-Soto P, Little SJ, Shafer R, Robbins GK, D'Aquila RT, Kawano Y, Young K, Dao P, Spina CA, Richman DD, Wong JK.

J Infect Dis. 2008 Feb 1;197(3):411-9. doi: 10.1086/525283.

40.

Expression and self-assembly of cowpea chlorotic mottle virus-like particles in Pseudomonas fluorescens.

Phelps JP, Dao P, Jin H, Rasochova L.

J Biotechnol. 2007 Feb 1;128(2):290-6. Epub 2006 Oct 14.

PMID:
17113675
41.

[Cellular signalling pathways and pathophysiology of pulmonary arterial hypertension].

Dao P, Montani D, Duong-Quy S, Dinh-Xuan AT.

Rev Mal Respir. 2006 Feb;23(1 Suppl):3S75-83. Review. French.

PMID:
16604016
42.

Effect of hip prostheses on radiotherapy dose.

Carolan M, Dao P, Fox C, Metcalfe P.

Australas Radiol. 2000 Aug;44(3):290-5.

PMID:
10974722
43.
44.

Purification and characterization of a human bradykinin binding protein from inflammatory cells.

Rajasekariah P, Warlow RS, Campbell ME, Ozsarac N, Dao PL, Swanton MK, Walls RS.

Int J Biochem Cell Biol. 1998 Mar;30(3):353-67.

PMID:
9611777
45.

Effects of chilling on the expression of ethylene biosynthetic genes in Passe-Crassane pear (Pyrus communis L.) fruits.

Lelièvre JM, Tichit L, Dao P, Fillion L, Nam YW, Pech JC, Latché A.

Plant Mol Biol. 1997 Mar;33(5):847-55.

PMID:
9106508
46.

Sequence analysis of an 81 kb contig from Arabidopsis thaliana chromosome III.

Quigley F, Dao P, Cottet A, Mache R.

Nucleic Acids Res. 1996 Nov 1;24(21):4313-8.

47.

Development of an intracavity-summed multiple-wavelength Nd:YAG laser for a rugged, solid-state sodium lidar system.

Farley RW, Dao PD.

Appl Opt. 1995 Jul 20;34(21):4269-73. doi: 10.1364/AO.34.004269.

PMID:
21052256
48.

Contribution of canopy leaching to sulphate deposition in a Scots pine forest.

Cape JN, Sheppard LJ, Fowler D, Harrison AF, Parkinson JA, Dao P, Paterson IS.

Environ Pollut. 1992;75(2):229-36.

PMID:
15092038
49.

Photopyroelectric spectroscopy of a-Si:H thin semiconducting films on quartz.

Mandelis A, Wagner RE, Ghandi K, Baltman R, Dao P.

Phys Rev B Condens Matter. 1989 Mar 15;39(8):5254-5260. No abstract available.

PMID:
9948915
50.

[Effects of incomplete inspiration and previous pulmonary volume history on the nitrogen test].

Pham QT, Teculescu D, Dao PL, Marchand M.

Rev Mal Respir. 1985;2(4):223-9. French.

PMID:
4089298

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