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Items: 25

1.

Abo1, a conserved bromodomain AAA-ATPase, maintains global nucleosome occupancy and organisation.

Gal C, Murton HE, Subramanian L, Whale AJ, Moore KM, Paszkiewicz K, Codlin S, Bähler J, Creamer KM, Partridge JF, Allshire RC, Kent NA, Whitehall SK.

EMBO Rep. 2016 Jan;17(1):79-93. doi: 10.15252/embr.201540476. Epub 2015 Nov 18.

2.

Widespread exon skipping triggers degradation by nuclear RNA surveillance in fission yeast.

Bitton DA, Atkinson SR, Rallis C, Smith GC, Ellis DA, Chen YY, Malecki M, Codlin S, Lemay JF, Cotobal C, Bachand F, Marguerat S, Mata J, Bähler J.

Genome Res. 2015 Jun;25(6):884-96. doi: 10.1101/gr.185371.114. Epub 2015 Apr 16.

3.

The genomic and phenotypic diversity of Schizosaccharomyces pombe.

Jeffares DC, Rallis C, Rieux A, Speed D, Převorovský M, Mourier T, Marsellach FX, Iqbal Z, Lau W, Cheng TM, Pracana R, Mülleder M, Lawson JL, Chessel A, Bala S, Hellenthal G, O'Fallon B, Keane T, Simpson JT, Bischof L, Tomiczek B, Bitton DA, Sideri T, Codlin S, Hellberg JE, van Trigt L, Jeffery L, Li JJ, Atkinson S, Thodberg M, Febrer M, McLay K, Drou N, Brown W, Hayles J, Carazo Salas RE, Ralser M, Maniatis N, Balding DJ, Balloux F, Durbin R, Bähler J.

Nat Genet. 2015 Mar;47(3):235-41. doi: 10.1038/ng.3215. Epub 2015 Feb 9.

4.

Natural genetic variation impacts expression levels of coding, non-coding, and antisense transcripts in fission yeast.

Clément-Ziza M, Marsellach FX, Codlin S, Papadakis MA, Reinhardt S, Rodríguez-López M, Martin S, Marguerat S, Schmidt A, Lee E, Workman CT, Bähler J, Beyer A.

Mol Syst Biol. 2014 Nov 28;10:764. doi: 10.15252/msb.20145123.

5.

A novel histone deacetylase complex in the control of transcription and genome stability.

Zilio N, Codlin S, Vashisht AA, Bitton DA, Head SR, Wohlschlegel JA, Bähler J, Boddy MN.

Mol Cell Biol. 2014 Sep 15;34(18):3500-14. doi: 10.1128/MCB.00519-14. Epub 2014 Jul 7.

6.

A histone H3K36 chromatin switch coordinates DNA double-strand break repair pathway choice.

Pai CC, Deegan RS, Subramanian L, Gal C, Sarkar S, Blaikley EJ, Walker C, Hulme L, Bernhard E, Codlin S, Bähler J, Allshire R, Whitehall S, Humphrey TC.

Nat Commun. 2014 Jun 9;5:4091. doi: 10.1038/ncomms5091.

7.

LaSSO, a strategy for genome-wide mapping of intronic lariats and branch points using RNA-seq.

Bitton DA, Rallis C, Jeffares DC, Smith GC, Chen YY, Codlin S, Marguerat S, Bähler J.

Genome Res. 2014 Jul;24(7):1169-79. doi: 10.1101/gr.166819.113. Epub 2014 Apr 7.

8.

TORC1 signaling inhibition by rapamycin and caffeine affect lifespan, global gene expression, and cell proliferation of fission yeast.

Rallis C, Codlin S, Bähler J.

Aging Cell. 2013 Aug;12(4):563-73. doi: 10.1111/acel.12080. Epub 2013 May 2.

9.

Stress induces remodelling of yeast interaction and co-expression networks.

Lehtinen S, Marsellach FX, Codlin S, Schmidt A, Clément-Ziza M, Beyer A, Bähler J, Orengo C, Pancaldi V.

Mol Biosyst. 2013 Jul;9(7):1697-707. doi: 10.1039/c3mb25548d. Epub 2013 Mar 7.

PMID:
23471351
10.

Quantitative analysis of fission yeast transcriptomes and proteomes in proliferating and quiescent cells.

Marguerat S, Schmidt A, Codlin S, Chen W, Aebersold R, Bähler J.

Cell. 2012 Oct 26;151(3):671-83. doi: 10.1016/j.cell.2012.09.019.

11.

Cuf2 is a novel meiosis-specific regulatory factor of meiosis maturation.

Ioannoni R, Beaudoin J, Lopez-Maury L, Codlin S, Bahler J, Labbe S.

PLoS One. 2012;7(4):e36338. doi: 10.1371/journal.pone.0036338. Epub 2012 Apr 27.

12.

Differential patterns of intronic and exonic DNA regions with respect to RNA polymerase II occupancy, nucleosome density and H3K36me3 marking in fission yeast.

Wilhelm BT, Marguerat S, Aligianni S, Codlin S, Watt S, Bähler J.

Genome Biol. 2011 Aug 22;12(8):R82. doi: 10.1186/gb-2011-12-8-r82.

13.

Deletion of btn1, an orthologue of CLN3, increases glycolysis and perturbs amino acid metabolism in the fission yeast model of Batten disease.

Pears MR, Codlin S, Haines RL, White IJ, Mortishire-Smith RJ, Mole SE, Griffin JL.

Mol Biosyst. 2010 Jun;6(6):1093-102. doi: 10.1039/b915670d. Epub 2010 Mar 17.

PMID:
20485751
14.

The fission yeast homeodomain protein Yox1p binds to MBF and confines MBF-dependent cell-cycle transcription to G1-S via negative feedback.

Aligianni S, Lackner DH, Klier S, Rustici G, Wilhelm BT, Marguerat S, Codlin S, Brazma A, de Bruin RA, Bähler J.

PLoS Genet. 2009 Aug;5(8):e1000626. doi: 10.1371/journal.pgen.1000626. Epub 2009 Aug 28.

15.

S. pombe btn1, the orthologue of the Batten disease gene CLN3, is required for vacuole protein sorting of Cpy1p and Golgi exit of Vps10p.

Codlin S, Mole SE.

J Cell Sci. 2009 Apr 15;122(Pt 8):1163-73. doi: 10.1242/jcs.038323. Epub 2009 Mar 19.

16.

The fission yeast model for the lysosomal storage disorder Batten disease predicts disease severity caused by mutations in CLN3.

Haines RL, Codlin S, Mole SE.

Dis Model Mech. 2009 Jan-Feb;2(1-2):84-92. doi: 10.1242/dmm.000851. Epub 2008 Dec 22.

17.

Btn1 affects cytokinesis and cell-wall deposition by independent mechanisms, one of which is linked to dysregulation of vacuole pH.

Codlin S, Haines RL, Burden JJ, Mole SE.

J Cell Sci. 2008 Sep 1;121(Pt 17):2860-70. doi: 10.1242/jcs.030122. Epub 2008 Aug 12.

18.

btn1 affects endocytosis, polarization of sterol-rich membrane domains and polarized growth in Schizosaccharomyces pombe.

Codlin S, Haines RL, Mole SE.

Traffic. 2008 Jun;9(6):936-50. doi: 10.1111/j.1600-0854.2008.00735.x. Epub 2008 Mar 10.

19.

A function retained by the common mutant CLN3 protein is responsible for the late onset of juvenile neuronal ceroid lipofuscinosis.

Kitzmüller C, Haines RL, Codlin S, Cutler DF, Mole SE.

Hum Mol Genet. 2008 Jan 15;17(2):303-12. Epub 2007 Oct 18.

PMID:
17947292
20.

Characterizing pathogenic processes in Batten disease: use of small eukaryotic model systems.

Phillips SN, Muzaffar N, Codlin S, Korey CA, Taschner PE, de Voer G, Mole SE, Pearce DA.

Biochim Biophys Acta. 2006 Oct;1762(10):906-19. Epub 2006 Sep 1. Review.

21.

btn1, the Schizosaccharomyces pombe homologue of the human Batten disease gene CLN3, regulates vacuole homeostasis.

Gachet Y, Codlin S, Hyams JS, Mole SE.

J Cell Sci. 2005 Dec 1;118(Pt 23):5525-36. Epub 2005 Nov 15.

22.

CLN6, which is associated with a lysosomal storage disease, is an endoplasmic reticulum protein.

Mole SE, Michaux G, Codlin S, Wheeler RB, Sharp JD, Cutler DF.

Exp Cell Res. 2004 Aug 15;298(2):399-406.

PMID:
15265688
23.
24.

Characterization of a palindromic enhancer element in the promoters of IL4, IL5, and IL13 cytokine genes.

Codlin S, Soh C, Lee T, Lavender P.

J Allergy Clin Immunol. 2003 Apr;111(4):826-32.

PMID:
12704365
25.

RTS1-an eukaryotic terminator of replication.

Vengrova S, Codlin S, Dalgaard JZ.

Int J Biochem Cell Biol. 2002 Sep;34(9):1031-4. Review.

PMID:
12009298

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