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Items: 1 to 50 of 299

1.

A cluster of multidrug-resistant Mycobacterium tuberculosis among patients arriving in Europe from the Horn of Africa: a molecular epidemiological study.

Walker TM, Merker M, Knoblauch AM, Helbling P, Schoch OD, van der Werf MJ, Kranzer K, Fiebig L, Kröger S, Haas W, Hoffmann H, Indra A, Egli A, Cirillo DM, Robert J, Rogers TR, Groenheit R, Mengshoel AT, Mathys V, Haanperä M, Soolingen DV, Niemann S, Böttger EC, Keller PM; MDR-TB Cluster Consortium.

Lancet Infect Dis. 2018 Jan 8. pii: S1473-3099(18)30004-5. doi: 10.1016/S1473-3099(18)30004-5. [Epub ahead of print] Erratum in: Lancet Infect Dis. 2018 Jan 10;:.

2.

A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis.

Miotto P, Tessema B, Tagliani E, Chindelevitch L, Starks AM, Emerson C, Hanna D, Kim PS, Liwski R, Zignol M, Gilpin C, Niemann S, Denkinger CM, Fleming J, Warren RM, Crook D, Posey J, Gagneux S, Hoffner S, Rodrigues C, Comas I, Engelthaler DM, Murray M, Alland D, Rigouts L, Lange C, Dheda K, Hasan R, Ranganathan UDK, McNerney R, Ezewudo M, Cirillo DM, Schito M, Köser CU, Rodwell TC.

Eur Respir J. 2017 Dec 28;50(6). pii: 1701354. doi: 10.1183/13993003.01354-2017. Print 2017 Dec.

3.

Culture and Next-generation sequencing-based drug susceptibility testing unveil high levels of drug-resistant-TB in Djibouti: results from the first national survey.

Tagliani E, Hassan MO, Waberi Y, De Filippo MR, Falzon D, Dean A, Zignol M, Supply P, Abdoulkader MA, Hassangue H, Cirillo DM.

Sci Rep. 2017 Dec 15;7(1):17672. doi: 10.1038/s41598-017-17705-3.

4.

Staphylococcus aureus impacts Pseudomonas aeruginosa chronic respiratory disease in murine models.

Cigana C, Bianconi I, Baldan R, De Simone M, Riva C, Sipione B, Rossi G, Cirillo DM, Bragonzi A.

J Infect Dis. 2017 Dec 5. doi: 10.1093/infdis/jix621. [Epub ahead of print]

PMID:
29216403
5.

Xpert MTB/RIF Ultra for detection of Mycobacterium tuberculosis and rifampicin resistance: a prospective multicentre diagnostic accuracy study.

Dorman SE, Schumacher SG, Alland D, Nabeta P, Armstrong DT, King B, Hall SL, Chakravorty S, Cirillo DM, Tukvadze N, Bablishvili N, Stevens W, Scott L, Rodrigues C, Kazi MI, Joloba M, Nakiyingi L, Nicol MP, Ghebrekristos Y, Anyango I, Murithi W, Dietze R, Lyrio Peres R, Skrahina A, Auchynka V, Chopra KK, Hanif M, Liu X, Yuan X, Boehme CC, Ellner JJ, Denkinger CM; study team.

Lancet Infect Dis. 2018 Jan;18(1):76-84. doi: 10.1016/S1473-3099(17)30691-6. Epub 2017 Nov 30.

6.

Survey of Living Organ Donors' Experience and Directions for Process Improvement.

Li T, Dokus MK, Kelly KN, Ugoeke N, Rogers JR, Asham G, Sharma VA, Cirillo DJ, Robinson MK, Venniro EK, Taylor JG, Orloff MS, McIntosh S, Kashyap R.

Prog Transplant. 2017 Sep;27(3):232-239. doi: 10.1177/1526924817715467. Epub 2017 Jul 4.

PMID:
29187096
7.

Treatment outcome with a short multidrug-resistant tuberculosis regimen in nine African countries.

Trébucq A, Schwoebel V, Kashongwe Z, Bakayoko A, Kuaban C, Noeske J, Hassane S, Souleymane B, Piubello A, Ciza F, Fikouma V, Gasana M, Ouedraogo M, Gninafon M, Van Deun A, Cirillo DM, Koura KG, Rieder HL.

Int J Tuberc Lung Dis. 2018 Jan 1;22(1):17-25. doi: 10.5588/ijtld.17.0498. Epub 2017 Nov 17.

PMID:
29149917
8.

Discovering the 3' UTR-mediated regulation of alpha-synuclein.

Marchese D, Botta-Orfila T, Cirillo D, Rodriguez JA, Livi CM, Fernández-Santiago R, Ezquerra M, Martí MJ, Bechara E, Tartaglia GG; Catalan MSA Registry (CMSAR).

Nucleic Acids Res. 2017 Dec 15;45(22):12888-12903. doi: 10.1093/nar/gkx1048.

9.

Mycobacterium abscessus, a taxonomic puzzle.

Tortoli E, Kohl TA, Brown-Elliott BA, Trovato A, Cardoso-Leão S, Garcia MJ, Vasireddy S, Turenne CY, Griffith DE, Philley JV, Niemann S, Wallace RJ, Cirillo DM.

Int J Syst Evol Microbiol. 2018 Jan;68(1):467-469. doi: 10.1099/ijsem.0.002457. Epub 2017 Nov 15. No abstract available.

PMID:
29139343
10.

Evolution of Phenotypic and Molecular Drug Susceptibility Testing.

Cirillo DM, Miotto P, Tortoli E.

Adv Exp Med Biol. 2017;1019:221-246. doi: 10.1007/978-3-319-64371-7_12.

PMID:
29116638
11.

Children under 5 years are at risk for tuberculosis after occasional contact with highly contagious patients: outbreak from a smear-positive healthcare worker.

Luzzati R, Migliori GB, Zignol M, Cirillo DM, Maschio M, Tominz R, Ventura G, Patussi V, D'Ambrosio L, Centis R, Michieletto F, Trovato A, Salton F, Busetti M, Di Santolo M, Raviglione M, Confalonieri M.

Eur Respir J. 2017 Nov 2;50(5). pii: 1701414. doi: 10.1183/13993003.01414-2017. Print 2017 Nov. No abstract available.

PMID:
29097434
12.

Aiming for zero tuberculosis transmission in low-burden countries.

Marais BJ, Walker TM, Cirillo DM, Raviglione M, Abubakar I, van der Werf MJ, Boehme C, Niemann S, Castro KG, Zumla A, Sintchenko V, Crook DW.

Lancet Respir Med. 2017 Nov;5(11):846-848. doi: 10.1016/S2213-2600(17)30382-X. Epub 2017 Oct 13. No abstract available.

PMID:
29033268
13.

The new phylogeny of the genus Mycobacterium: The old and the news.

Tortoli E, Fedrizzi T, Meehan CJ, Trovato A, Grottola A, Giacobazzi E, Serpini GF, Tagliazucchi S, Fabio A, Bettua C, Bertorelli R, Frascaro F, De Sanctis V, Pecorari M, Jousson O, Segata N, Cirillo DM.

Infect Genet Evol. 2017 Dec;56:19-25. doi: 10.1016/j.meegid.2017.10.013. Epub 2017 Oct 11.

PMID:
29030295
14.

Evaluation of Mycobacterium tuberculosis viability in OMNIgene-SPUTUM reagent upon multi-day transport at ambient temperature.

Tagliani E, Alagna R, Tafaj S, Hafizi H, Cirillo DM.

BMC Infect Dis. 2017 Oct 2;17(1):663. doi: 10.1186/s12879-017-2756-3.

15.

Mozambique's journey toward accreditation of the National Tuberculosis Reference Laboratory.

Viegas SO, Azam K, Madeira C, Aguiar C, Dolores C, Mandlaze AP, Chongo P, Masamha J, Cirillo DM, Jani IV, Gudo ES.

Afr J Lab Med. 2017 Mar 31;6(2):491. doi: 10.4102/ajlm.v6i2.491. eCollection 2017.

16.

The New Xpert MTB/RIF Ultra: Improving Detection of Mycobacterium tuberculosis and Resistance to Rifampin in an Assay Suitable for Point-of-Care Testing.

Chakravorty S, Simmons AM, Rowneki M, Parmar H, Cao Y, Ryan J, Banada PP, Deshpande S, Shenai S, Gall A, Glass J, Krieswirth B, Schumacher SG, Nabeta P, Tukvadze N, Rodrigues C, Skrahina A, Tagliani E, Cirillo DM, Davidow A, Denkinger CM, Persing D, Kwiatkowski R, Jones M, Alland D.

MBio. 2017 Aug 29;8(4). pii: e00812-17. doi: 10.1128/mBio.00812-17.

17.

Mycobacterium aquaticum sp. nov., a rapidly growing species isolated from haemodialysis water.

Hashemi Shahraki A, Trovato A, Droz S, Haidarieh P, Borroni E, Mirsaeidi M, Mannino R, Hashemzadeh M, Mariottini A, Cirillo DM, Tortoli E.

Int J Syst Evol Microbiol. 2017 Sep;67(9):3279-3282. doi: 10.1099/ijsem.0.002103. Epub 2017 Aug 22.

PMID:
28829035
18.

Analytical evaluation of QuantiFERON- Plus and QuantiFERON- Gold In-tube assays in subjects with or without tuberculosis.

Petruccioli E, Vanini V, Chiacchio T, Cuzzi G, Cirillo DM, Palmieri F, Ippolito G, Goletti D.

Tuberculosis (Edinb). 2017 Sep;106:38-43. doi: 10.1016/j.tube.2017.06.002. Epub 2017 Jun 27.

19.

Mycobacterium abscessus in patients with cystic fibrosis: low impact of inter-human transmission in Italy.

Tortoli E, Kohl TA, Trovato A, Baldan R, Campana S, Cariani L, Colombo C, Costa D, Cristadoro S, Di Serio MC, Manca A, Pizzamiglio G, Rancoita PMV, Rossolini GM, Taccetti G, Teri A, Niemann S, Cirillo DM.

Eur Respir J. 2017 Jul 13;50(1). pii: 1602525. doi: 10.1183/13993003.02525-2016. Print 2017 Jul. No abstract available.

PMID:
28705942
20.

omiXcore: a web server for prediction of protein interactions with large RNA.

Armaos A, Cirillo D, Gaetano Tartaglia G.

Bioinformatics. 2017 Oct 1;33(19):3104-3106. doi: 10.1093/bioinformatics/btx361.

PMID:
28637296
21.

Mycobacterium persicum sp. nov., a novel species closely related to Mycobacterium kansasii and Mycobacterium gastri.

Shahraki AH, Trovato A, Mirsaeidi M, Borroni E, Heidarieh P, Hashemzadeh M, Shahbazi N, Cirillo DM, Tortoli E.

Int J Syst Evol Microbiol. 2017 Jun;67(6):1766-1770. doi: 10.1099/ijsem.0.001862. Epub 2017 Jun 20.

PMID:
28629501
23.

Evaluation of a novel line probe assay to detect resistance to pyrazinamide, a key drug used for tuberculosis treatment.

Driesen M, Kondo Y, de Jong BC, Torrea G, Asnong S, Desmaretz C, Mostofa KSM, Tahseen S, Whitfield MG, Cirillo DM, Miotto P, Cabibbe AM, Rigouts L.

Clin Microbiol Infect. 2018 Jan;24(1):60-64. doi: 10.1016/j.cmi.2017.05.026. Epub 2017 Jun 3.

24.

Molecular typing of Mycobacterium Abscessus isolated from cystic fibrosis patients.

Trovato A, Baldan R, Costa D, Simonetti TM, Cirillo DM, Tortoli E.

Int J Mycobacteriol. 2017 Apr-Jun;6(2):138-141. doi: 10.4103/ijmy.ijmy_33_17.

25.

Predictors of Continued Smoking and Interest in Cessation Among Older Female Smokers.

Weaver KE, Snively BM, Hogan P, Josephs K, Johnson KC, Coday M, Progovac AM, Cirillo DJ, Ockene JK, Tindle HA.

J Aging Health. 2017 Jan 1:898264316687622. doi: 10.1177/0898264316687622. [Epub ahead of print]

PMID:
28553800
26.

Long-lasting tuberculous pleurisy.

Petruccioli E, Scriba TJ, Petrone L, Hatherill M, Cirillo DM, Joosten SA, Codecasa LR, Ottenhoff TH, Denkinger CM, Goletti D.

Eur Respir J. 2017 May 25;49(5). pii: 1700356. doi: 10.1183/13993003.00356-2017. Print 2017 May. No abstract available.

PMID:
28546275
27.

Moving towards tuberculosis elimination: a call for action from Italy and a possible model for other low tuberculosis incidence countries.

Blasi F, Matteelli A, Sotgiu G, Cirillo DM, Palmieri F, Fattorini L, Migliori GB.

Eur Respir J. 2017 Feb 2;49(2). pii: 1602242. doi: 10.1183/13993003.02242-2016. Print 2017 Feb. No abstract available.

PMID:
28153873
28.

Venous thromboembolism incidence, recurrence, and mortality based on Women's Health Initiative data and Medicare claims.

Burwen DR, Wu C, Cirillo D, Rossouw JE, Margolis KL, Limacher M, Wallace R, Allison M, Eaton CB, Safford M, Freiberg M.

Thromb Res. 2017 Feb;150:78-85. doi: 10.1016/j.thromres.2016.11.015. Epub 2016 Nov 15.

PMID:
28063368
29.
30.

Best approaches to drug-resistance surveillance at the country level.

Cabibbe AM, Cirillo DM.

Int J Mycobacteriol. 2016 Dec;5 Suppl 1:S40-S41. doi: 10.1016/j.ijmyco.2016.09.010. Epub 2016 Oct 21.

31.

Reaching consensus on drug resistance conferring mutations.

Cirillo DM, Miotto P, Tagliani E; ReSeqTB Consortium.

Int J Mycobacteriol. 2016 Dec;5 Suppl 1:S33. doi: 10.1016/j.ijmyco.2016.11.009. Epub 2016 Nov 25. No abstract available.

32.

Reaching consensus on drug resistance conferring mutations.

Cirillo DM, Miotto P, Tagliani E; ReSeqTB Consortium.

Int J Mycobacteriol. 2016 Dec;5 Suppl 1:S31-S32. doi: 10.1016/j.ijmyco.2016.09.062. Epub 2016 Nov 15.

33.

Use of WGS in Mycobacterium tuberculosis routine diagnosis.

Cirillo DM, Cabibbe AM, De Filippo MR, Trovato A, Simonetti T, Rossolini GM, Tortoli E.

Int J Mycobacteriol. 2016 Dec;5 Suppl 1:S252-S253. doi: 10.1016/j.ijmyco.2016.09.053. Epub 2016 Nov 11.

34.

Characterization of the CD4 and CD8 T-cell response in the QuantiFERON-TB Gold Plus kit.

Petruccioli E, Chiacchio T, Pepponi I, Vanini V, Urso R, Cuzzi G, Barcellini L, Palmieri F, Cirillo DM, Ippolito G, Goletti D.

Int J Mycobacteriol. 2016 Dec;5 Suppl 1:S25-S26. doi: 10.1016/j.ijmyco.2016.09.063. Epub 2016 Nov 11.

35.

Modulation of interferon-gamma response to QuantiFERON-TB-plus detected by enzyme-linked immunosorbent assay in patients with active and latent tuberculosis infection.

Petruccioli E, Vanini V, Chiacchio T, Cirillo DM, Palmieri F, Ippolito G, Goletti D.

Int J Mycobacteriol. 2016 Dec;5 Suppl 1:S143-S144. doi: 10.1016/j.ijmyco.2016.09.029. Epub 2016 Nov 11.

36.

Modulation of CD4 and CD8 response to QuantiFERON-TB Plus in patients with active tuberculosis and latent tuberculosis infection followed over time during treatment.

Chiacchio T, Petruccioli E, Pepponi I, Vanini V, Gualano G, Cirillo D, Palmieri F, Ippolito G, Goletti D.

Int J Mycobacteriol. 2016 Dec;5 Suppl 1:S141-S142. doi: 10.1016/j.ijmyco.2016.09.034. Epub 2016 Nov 11.

37.

Quantitative predictions of protein interactions with long noncoding RNAs.

Cirillo D, Blanco M, Armaos A, Buness A, Avner P, Guttman M, Cerase A, Tartaglia GG.

Nat Methods. 2016 Dec 29;14(1):5-6. doi: 10.1038/nmeth.4100. No abstract available.

PMID:
28032625
38.

From latent to patent: rethinking prediction of tuberculosis.

Cobelens F, Kik S, Esmail H, Cirillo DM, Lienhardt C, Matteelli A.

Lancet Respir Med. 2017 Apr;5(4):243-244. doi: 10.1016/S2213-2600(16)30419-2. Epub 2016 Dec 22. No abstract available.

PMID:
28017341
39.

Correlates of tuberculosis risk: predictive biomarkers for progression to active tuberculosis.

Petruccioli E, Scriba TJ, Petrone L, Hatherill M, Cirillo DM, Joosten SA, Ottenhoff TH, Denkinger CM, Goletti D.

Eur Respir J. 2016 Dec;48(6):1751-1763. doi: 10.1183/13993003.01012-2016. Epub 2016 Nov 11. Review.

40.

First evaluation of QuantiFERON-TB Gold Plus performance in contact screening.

Barcellini L, Borroni E, Brown J, Brunetti E, Campisi D, Castellotti PF, Codecasa LR, Cugnata F, Di Serio C, Ferrarese M, Goletti D, Lipman M, Rancoita PM, Russo G, Tadolini M, Vanino E, Cirillo DM.

Eur Respir J. 2016 Nov;48(5):1411-1419. doi: 10.1183/13993003.00510-2016. Epub 2016 Jul 7.

PMID:
27390280
41.

Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages.

Stucki D, Brites D, Jeljeli L, Coscolla M, Liu Q, Trauner A, Fenner L, Rutaihwa L, Borrell S, Luo T, Gao Q, Kato-Maeda M, Ballif M, Egger M, Macedo R, Mardassi H, Moreno M, Tudo Vilanova G, Fyfe J, Globan M, Thomas J, Jamieson F, Guthrie JL, Asante-Poku A, Yeboah-Manu D, Wampande E, Ssengooba W, Joloba M, Henry Boom W, Basu I, Bower J, Saraiva M, Vaconcellos SEG, Suffys P, Koch A, Wilkinson R, Gail-Bekker L, Malla B, Ley SD, Beck HP, de Jong BC, Toit K, Sanchez-Padilla E, Bonnet M, Gil-Brusola A, Frank M, Penlap Beng VN, Eisenach K, Alani I, Wangui Ndung'u P, Revathi G, Gehre F, Akter S, Ntoumi F, Stewart-Isherwood L, Ntinginya NE, Rachow A, Hoelscher M, Cirillo DM, Skenders G, Hoffner S, Bakonyte D, Stakenas P, Diel R, Crudu V, Moldovan O, Al-Hajoj S, Otero L, Barletta F, Jane Carter E, Diero L, Supply P, Comas I, Niemann S, Gagneux S.

Nat Genet. 2016 Dec;48(12):1535-1543. doi: 10.1038/ng.3704. Epub 2016 Oct 31.

42.

Whole genome sequencing of Mycobacterium tuberculosis for detection of drug resistance: a systematic review.

Papaventsis D, Casali N, Kontsevaya I, Drobniewski F, Cirillo DM, Nikolayevskyy V.

Clin Microbiol Infect. 2017 Feb;23(2):61-68. doi: 10.1016/j.cmi.2016.09.008. Epub 2016 Sep 22. Review.

43.

First characterization of the CD4 and CD8 T-cell responses to QuantiFERON-TB Plus.

Petruccioli E, Chiacchio T, Pepponi I, Vanini V, Urso R, Cuzzi G, Barcellini L, Cirillo DM, Palmieri F, Ippolito G, Goletti D.

J Infect. 2016 Dec;73(6):588-597. doi: 10.1016/j.jinf.2016.09.008. Epub 2016 Oct 4.

44.

Control of infectious mortality due to carbapenemase-producing Klebsiella pneumoniae in hematopoietic stem cell transplantation.

Forcina A, Baldan R, Marasco V, Cichero P, Bondanza A, Noviello M, Piemontese S, Soliman C, Greco R, Lorentino F, Giglio F, Messina C, Carrabba M, Bernardi M, Peccatori J, Moro M, Biancardi A, Nizzero P, Scarpellini P, Cirillo DM, Mancini N, Corti C, Clementi M, Ciceri F.

Bone Marrow Transplant. 2017 Jan;52(1):114-119. doi: 10.1038/bmt.2016.234. Epub 2016 Sep 26.

PMID:
27668762
45.
46.

A Multilaboratory, Multicountry Study To Determine Bedaquiline MIC Quality Control Ranges for Phenotypic Drug Susceptibility Testing.

Kaniga K, Cirillo DM, Hoffner S, Ismail NA, Kaur D, Lounis N, Metchock B, Pfyffer GE, Venter A.

J Clin Microbiol. 2016 Dec;54(12):2956-2962. Epub 2016 Sep 21.

47.

Delamanid susceptibility testing of Mycobacterium tuberculosis using the resazurin microtitre assay and the BACTEC™ MGIT™ 960 system-authors' response.

Hoffmann H, Borroni E, Schena E, Nedialkova L, Hofmann-Thiel S, Cirillo D.

J Antimicrob Chemother. 2016 Dec;71(12):3625. Epub 2016 Sep 12. No abstract available.

PMID:
27621178
48.

Preliminary data on precision of QuantiFERON-TB Plus performance.

Cirillo DM, Barcellini L, Goletti D.

Eur Respir J. 2016 Sep;48(3):955-6. doi: 10.1183/13993003.01084-2016. No abstract available.

PMID:
27581411
49.

Emended description of Mycobacterium abscessus, Mycobacterium abscessus subsp. abscessus and Mycobacteriumabscessus subsp. bolletii and designation of Mycobacteriumabscessus subsp. massiliense comb. nov.

Tortoli E, Kohl TA, Brown-Elliott BA, Trovato A, Leão SC, Garcia MJ, Vasireddy S, Turenne CY, Griffith DE, Philley JV, Baldan R, Campana S, Cariani L, Colombo C, Taccetti G, Teri A, Niemann S, Wallace RJ Jr, Cirillo DM.

Int J Syst Evol Microbiol. 2016 Nov;66(11):4471-4479. doi: 10.1099/ijsem.0.001376. Epub 2016 Aug 4.

PMID:
27499141
50.

The use of digital PCR to improve the application of quantitative molecular diagnostic methods for tuberculosis.

Devonshire AS, O'Sullivan DM, Honeyborne I, Jones G, Karczmarczyk M, Pavšič J, Gutteridge A, Milavec M, Mendoza P, Schimmel H, Van Heuverswyn F, Gorton R, Cirillo DM, Borroni E, Harris K, Barnard M, Heydenrych A, Ndusilo N, Wallis CL, Pillay K, Barry T, Reddington K, Richter E, Mozioğlu E, Akyürek S, Yalçınkaya B, Akgoz M, Žel J, Foy CA, McHugh TD, Huggett JF.

BMC Infect Dis. 2016 Aug 3;16:366. doi: 10.1186/s12879-016-1696-7.

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