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Items: 1 to 50 of 243

1.

Long chain n-3 fatty acids attenuate oncogenic KRas-driven proliferation by altering plasma membrane nanoscale proteolipid composition.

Fuentes NR, Mlih M, Barhoumi R, Fan YY, Hardin P, Steele TJ, Behmer S, Prior IA, Karpac J, Chapkin RS.

Cancer Res. 2018 May 16. pii: canres.0324.2018. doi: 10.1158/0008-5472.CAN-18-0324. [Epub ahead of print]

PMID:
29769200
2.

Dietary fat and fiber interact to uniquely modify global histone post-translational epigenetic programming in a rat colon cancer progression model.

Triff K, McLean MW, Callaway E, Goldsby J, Ivanov I, Chapkin RS.

Int J Cancer. 2018 Apr 16. doi: 10.1002/ijc.31525. [Epub ahead of print]

PMID:
29659013
3.

Omega-3 fatty acids, membrane remodeling and cancer prevention.

Fuentes NR, Kim E, Fan YY, Chapkin RS.

Mol Aspects Med. 2018 Apr 12. pii: S0098-2997(17)30138-3. doi: 10.1016/j.mam.2018.04.001. [Epub ahead of print] Review.

PMID:
29627343
4.

Structure-Dependent Modulation of Aryl Hydrocarbon Receptor-Mediated Activities by Flavones.

Jin UH, Park H, Li X, Davidson LA, Allred C, Patil B, Jayaprakasha G, Orr AA, Mao L, Chapkin RS, Jayaraman A, Tamamis P, Safe S.

Toxicol Sci. 2018 Mar 23. doi: 10.1093/toxsci/kfy075. [Epub ahead of print]

PMID:
29584932
5.

Shift work cycle-induced alterations of circadian rhythms potentiate the effects of high fat diet on inflammation and metabolism.

Kim SM, Neuendorff N, Alaniz RC, Sun Y, Chapkin RS, Earnest DJ.

FASEB J. 2018 Feb 5:fj201700784R. doi: 10.1096/fj.201700784R. [Epub ahead of print]

PMID:
29405095
6.

Remodelling of primary human CD4+ T cell plasma membrane order by n-3 PUFA.

Fan YY, Fuentes NR, Hou TY, Barhoumi R, Li XC, Deutz NEP, Engelen MPKJ, McMurray DN, Chapkin RS.

Br J Nutr. 2018 Jan;119(2):163-175. doi: 10.1017/S0007114517003385. Epub 2017 Dec 18.

7.

The non-invasive exfoliated transcriptome (exfoliome) reflects the tissue-level transcriptome in a mouse model of NSAID enteropathy.

Whitfield-Cargile CM, Cohen ND, He K, Ivanov I, Goldsby JS, Chamoun-Emanuelli A, Weeks BR, Davidson LA, Chapkin RS.

Sci Rep. 2017 Oct 31;7(1):14687. doi: 10.1038/s41598-017-13999-5.

8.

Adiponectin is required for maintaining normal body temperature in a cold environment.

Wei Q, Lee JH, Wang H, Bongmba OYN, Wu CS, Pradhan G, Sun Z, Chew L, Bajaj M, Chan L, Chapkin RS, Chen MH, Sun Y.

BMC Physiol. 2017 Oct 23;17(1):8. doi: 10.1186/s12899-017-0034-7.

9.

Short Chain Fatty Acids Enhance Aryl Hydrocarbon (Ah) Responsiveness in Mouse Colonocytes and Caco-2 Human Colon Cancer Cells.

Jin UH, Cheng Y, Park H, Davidson LA, Callaway ES, Chapkin RS, Jayaraman A, Asante A, Allred C, Weaver EA, Safe S.

Sci Rep. 2017 Aug 31;7(1):10163. doi: 10.1038/s41598-017-10824-x.

10.

Streptococcus gallolyticus subsp. gallolyticus promotes colorectal tumor development.

Kumar R, Herold JL, Schady D, Davis J, Kopetz S, Martinez-Moczygemba M, Murray BE, Han F, Li Y, Callaway E, Chapkin RS, Dashwood WM, Dashwood RH, Berry T, Mackenzie C, Xu Y.

PLoS Pathog. 2017 Jul 13;13(7):e1006440. doi: 10.1371/journal.ppat.1006440. eCollection 2017 Jul.

11.

Shaping functional gut microbiota using dietary bioactives to reduce colon cancer risk.

Seidel DV, Azcárate-Peril MA, Chapkin RS, Turner ND.

Semin Cancer Biol. 2017 Oct;46:191-204. doi: 10.1016/j.semcancer.2017.06.009. Epub 2017 Jul 1. Review.

PMID:
28676459
12.

The Model-Based Study of the Effectiveness of Reporting Lists of Small Feature Sets Using RNA-Seq Data.

Kim E, Ivanov I, Hua J, Lampe JW, Hullar MA, Chapkin RS, Dougherty ER.

Cancer Inform. 2017 Jun 12;16:1176935117710530. doi: 10.1177/1176935117710530. eCollection 2017.

13.

Estradiol Has Differential Effects on Acute Colonic Inflammation in the Presence and Absence of Estrogen Receptor β Expression.

Armstrong CM, Allred KF, Weeks BR, Chapkin RS, Allred CD.

Dig Dis Sci. 2017 Aug;62(8):1977-1984. doi: 10.1007/s10620-017-4631-x. Epub 2017 Jun 1.

14.

Emerging role of chemoprotective agents in the dynamic shaping of plasma membrane organization.

Fuentes NR, Salinas ML, Kim E, Chapkin RS.

Biochim Biophys Acta. 2017 Sep;1859(9 Pt B):1668-1678. doi: 10.1016/j.bbamem.2017.03.014. Epub 2017 Mar 22. Review.

PMID:
28342710
15.

Assessment of histone tail modifications and transcriptional profiling during colon cancer progression reveals a global decrease in H3K4me3 activity.

Triff K, McLean MW, Konganti K, Pang J, Callaway E, Zhou B, Ivanov I, Chapkin RS.

Biochim Biophys Acta. 2017 Jun;1863(6):1392-1402. doi: 10.1016/j.bbadis.2017.03.009. Epub 2017 Mar 16.

PMID:
28315775
16.

The Interaction between Dietary Fiber and Fat and Risk of Colorectal Cancer in the Women's Health Initiative.

Navarro SL, Neuhouser ML, Cheng TD, Tinker LF, Shikany JM, Snetselaar L, Martinez JA, Kato I, Beresford SA, Chapkin RS, Lampe JW.

Nutrients. 2016 Nov 30;8(12). pii: E779.

17.

Editor's Highlight: Microbial-Derived 1,4-Dihydroxy-2-naphthoic Acid and Related Compounds as Aryl Hydrocarbon Receptor Agonists/Antagonists: Structure-Activity Relationships and Receptor Modeling.

Cheng Y, Jin UH, Davidson LA, Chapkin RS, Jayaraman A, Tamamis P, Orr A, Allred C, Denison MS, Soshilov A, Weaver E, Safe S.

Toxicol Sci. 2017 Feb;155(2):458-473. doi: 10.1093/toxsci/kfw230. Epub 2016 Nov 11.

18.

Rapidly cycling Lgr5+ stem cells are exquisitely sensitive to extrinsic dietary factors that modulate colon cancer risk.

Kim E, Davidson LA, Zoh RS, Hensel ME, Salinas ML, Patil BS, Jayaprakasha GK, Callaway ES, Allred CD, Turner ND, Weeks BR, Chapkin RS.

Cell Death Dis. 2016 Nov 10;7(11):e2460. doi: 10.1038/cddis.2016.269.

19.

Murine Colonic Organoid Culture System and Downstream Assay Applications.

Fan YY, Davidson LA, Chapkin RS.

Methods Mol Biol. 2016 Aug 19. [Epub ahead of print]

20.

Nutrient-Gene Interaction in Colon Cancer, from the Membrane to Cellular Physiology.

Hou TY, Davidson LA, Kim E, Fan YY, Fuentes NR, Triff K, Chapkin RS.

Annu Rev Nutr. 2016 Jul 17;36:543-70. doi: 10.1146/annurev-nutr-071715-051039. Review.

21.

Comprehensive site-specific whole genome profiling of stromal and epithelial colonic gene signatures in human sigmoid colon and rectal tissue.

Knight JM, Kim E, Ivanov I, Davidson LA, Goldsby JS, Hullar MA, Randolph TW, Kaz AM, Levy L, Lampe JW, Chapkin RS.

Physiol Genomics. 2016 Sep 1;48(9):651-9. doi: 10.1152/physiolgenomics.00023.2016. Epub 2016 Jul 8.

22.

Role of Inflammatory Signaling in the Differential Effects of Saturated and Poly-unsaturated Fatty Acids on Peripheral Circadian Clocks.

Kim SM, Neuendorff N, Chapkin RS, Earnest DJ.

EBioMedicine. 2016 May;7:100-11. doi: 10.1016/j.ebiom.2016.03.037. Epub 2016 Mar 31.

23.

Dietary fat and fiber interactively modulate apoptosis and mitochondrial bioenergetic profiles in mouse colon in a site-specific manner.

Fan YY, Vaz FM, Chapkin RS.

Eur J Cancer Prev. 2017 Jul;26(4):301-308. doi: 10.1097/CEJ.0000000000000263.

PMID:
27167153
24.

Distinct Adipose Depots from Mice Differentially Respond to a High-Fat, High-Salt Diet.

DeClercq VC, Goldsby JS, McMurray DN, Chapkin RS.

J Nutr. 2016 Jun;146(6):1189-96. doi: 10.3945/jn.115.227496. Epub 2016 May 4.

25.

PCAN: Probabilistic correlation analysis of two non-normal data sets.

Zoh RS, Mallick B, Ivanov I, Baladandayuthapani V, Manyam G, Chapkin RS, Lampe JW, Carroll RJ.

Biometrics. 2016 Dec;72(4):1358-1368. doi: 10.1111/biom.12516. Epub 2016 Apr 1.

26.

The microbiota-derived metabolite indole decreases mucosal inflammation and injury in a murine model of NSAID enteropathy.

Whitfield-Cargile CM, Cohen ND, Chapkin RS, Weeks BR, Davidson LA, Goldsby JS, Hunt CL, Steinmeyer SH, Menon R, Suchodolski JS, Jayaraman A, Alaniz RC.

Gut Microbes. 2016 May 3;7(3):246-61. doi: 10.1080/19490976.2016.1156827. Epub 2016 Mar 23.

27.

Data describing the effects of dietary bioactive agents on colonic stem cell microRNA and mRNA expression.

Shah MS, Kim E, Davidson LA, Knight JM, Zoh RS, Goldsby JS, Callaway ES, Zhou B, Ivanov I, Chapkin RS.

Data Brief. 2015 Dec 19;6:398-404. doi: 10.1016/j.dib.2015.12.026. eCollection 2016 Mar.

28.

Homeostatic responses of colonic LGR5+ stem cells following acute in vivo exposure to a genotoxic carcinogen.

Kim E, Davidson LA, Zoh RS, Hensel ME, Patil BS, Jayaprakasha GK, Callaway ES, Allred CD, Turner ND, Weeks BR, Chapkin RS.

Carcinogenesis. 2016 Feb;37(2):206-14. doi: 10.1093/carcin/bgv250. Epub 2015 Dec 30.

29.

Targeted Deletion of p53 in Lgr5-Expressing Intestinal Stem Cells Promotes Colon Tumorigenesis in a Preclinical Model of Colitis-Associated Cancer.

Davidson LA, Callaway ES, Kim E, Weeks BR, Fan YY, Allred CD, Chapkin RS.

Cancer Res. 2015 Dec 15;75(24):5392-7. doi: 10.1158/0008-5472.CAN-15-1706. Epub 2015 Dec 2.

30.

Comparative effects of diet and carcinogen on microRNA expression in the stem cell niche of the mouse colonic crypt.

Shah MS, Kim E, Davidson LA, Knight JM, Zoh RS, Goldsby JS, Callaway ES, Zhou B, Ivanov I, Chapkin RS.

Biochim Biophys Acta. 2016 Jan;1862(1):121-34. doi: 10.1016/j.bbadis.2015.10.012. Epub 2015 Oct 19.

31.

n-3 polyunsaturated fatty acids suppress CD4(+) T cell proliferation by altering phosphatidylinositol-(4,5)-bisphosphate [PI(4,5)P2] organization.

Hou TY, Barhoumi R, Fan YY, Rivera GM, Hannoush RN, McMurray DN, Chapkin RS.

Biochim Biophys Acta. 2016 Jan;1858(1):85-96. doi: 10.1016/j.bbamem.2015.10.009. Epub 2015 Oct 23.

32.

Obesity promotes colonic stem cell expansion during cancer initiation.

DeClercq V, McMurray DN, Chapkin RS.

Cancer Lett. 2015 Dec 28;369(2):336-43. doi: 10.1016/j.canlet.2015.10.001. Epub 2015 Oct 9.

33.

Detecting Multivariate Gene Interactions in RNA-Seq Data Using Optimal Bayesian Classification.

Knight JM, Ivanov I, Triff K, Chapkin RS, Dougherty ER.

IEEE/ACM Trans Comput Biol Bioinform. 2018 Mar-Apr;15(2):484-493. doi: 10.1109/TCBB.2015.2485223. Epub 2015 Oct 1.

PMID:
26441451
34.

MicroRNA-223 is a crucial mediator of PPARγ-regulated alternative macrophage activation.

Ying W, Tseng A, Chang RC, Morin A, Brehm T, Triff K, Nair V, Zhuang G, Song H, Kanameni S, Wang H, Golding MC, Bazer FW, Chapkin RS, Safe S, Zhou B.

J Clin Invest. 2015 Nov 2;125(11):4149-59. doi: 10.1172/JCI81656. Epub 2015 Oct 5.

35.

In vivo regulation of colonic cell proliferation, differentiation, apoptosis, and P27Kip1 by dietary fish oil and butyrate in rats.

Hong MY, Turner ND, Murphy ME, Carroll RJ, Chapkin RS, Lupton JR.

Cancer Prev Res (Phila). 2015 Nov;8(11):1076-83. doi: 10.1158/1940-6207.CAPR-15-0147. Epub 2015 Aug 31.

36.

Omega-3 fatty acids, lipid rafts, and T cell signaling.

Hou TY, McMurray DN, Chapkin RS.

Eur J Pharmacol. 2016 Aug 15;785:2-9. doi: 10.1016/j.ejphar.2015.03.091. Epub 2015 May 20. Review.

37.

A bioassay to measure energy metabolism in mouse colonic crypts, organoids, and sorted stem cells.

Fan YY, Davidson LA, Callaway ES, Wright GA, Safe S, Chapkin RS.

Am J Physiol Gastrointest Liver Physiol. 2015 Jul 1;309(1):G1-9. doi: 10.1152/ajpgi.00052.2015. Epub 2015 May 14.

39.

Aryl Hydrocarbon Receptor Activity of Tryptophan Metabolites in Young Adult Mouse Colonocytes.

Cheng Y, Jin UH, Allred CD, Jayaraman A, Chapkin RS, Safe S.

Drug Metab Dispos. 2015 Oct;43(10):1536-43. doi: 10.1124/dmd.115.063677. Epub 2015 Apr 14.

40.

Fecal microbiota composition of breast-fed infants is correlated with human milk oligosaccharides consumed.

Wang M, Li M, Wu S, Lebrilla CB, Chapkin RS, Ivanov I, Donovan SM.

J Pediatr Gastroenterol Nutr. 2015 Jun;60(6):825-33. doi: 10.1097/MPG.0000000000000752.

41.

Mechanisms by Which Pleiotropic Amphiphilic n-3 PUFA Reduce Colon Cancer Risk.

Chapkin RS, DeClercq V, Kim E, Fuentes NR, Fan YY.

Curr Colorectal Cancer Rep. 2014 Dec 1;10(4):442-452.

42.

Analysis of epidermal growth factor receptor dimerization by BS³ cross-linking.

Turk HF, Chapkin RS.

Methods Mol Biol. 2015;1233:25-34. doi: 10.1007/978-1-4939-1789-1_3.

43.

Antagonizing arachidonic acid-derived eicosanoids reduces inflammatory Th17 and Th1 cell-mediated inflammation and colitis severity.

Monk JM, Turk HF, Fan YY, Callaway E, Weeks B, Yang P, McMurray DN, Chapkin RS.

Mediators Inflamm. 2014;2014:917149. doi: 10.1155/2014/917149. Epub 2014 Jul 17.

44.

Mitochondrial glycerol-3-phosphate acyltransferase-1 is essential for murine CD4(+) T cell metabolic activation.

Faris R, Fan YY, De Angulo A, Chapkin RS, deGraffenried LA, Jolly CA.

Biochim Biophys Acta. 2014 Oct;1842(10):1475-82. doi: 10.1016/j.bbalip.2014.07.009. Epub 2014 Jul 24.

45.

Noninvasive molecular fingerprinting of host-microbiome interactions in neonates.

Donovan SM, Wang M, Monaco MH, Martin CR, Davidson LA, Ivanov I, Chapkin RS.

FEBS Lett. 2014 Nov 17;588(22):4112-9. doi: 10.1016/j.febslet.2014.07.008. Epub 2014 Jul 17. Review.

46.

Non-invasive analysis of intestinal development in preterm and term infants using RNA-Sequencing.

Knight JM, Davidson LA, Herman D, Martin CR, Goldsby JS, Ivanov IV, Donovan SM, Chapkin RS.

Sci Rep. 2014 Jun 26;4:5453. doi: 10.1038/srep05453.

47.

n-3 PUFAs reduce T-helper 17 cell differentiation by decreasing responsiveness to interleukin-6 in isolated mouse splenic CD4⁺ T cells.

Allen MJ, Fan YY, Monk JM, Hou TY, Barhoumi R, McMurray DN, Chapkin RS.

J Nutr. 2014 Aug;144(8):1306-13. doi: 10.3945/jn.114.194407. Epub 2014 Jun 18.

48.

Effects of fatty acids on benzo[a]pyrene uptake and metabolism in human lung adenocarcinoma A549 cells.

Barhoumi R, Mouneimne Y, Chapkin RS, Burghardt RC.

PLoS One. 2014 Mar 20;9(3):e90908. doi: 10.1371/journal.pone.0090908. eCollection 2014.

49.

Microbiome-derived tryptophan metabolites and their aryl hydrocarbon receptor-dependent agonist and antagonist activities.

Jin UH, Lee SO, Sridharan G, Lee K, Davidson LA, Jayaraman A, Chapkin RS, Alaniz R, Safe S.

Mol Pharmacol. 2014 May;85(5):777-88. doi: 10.1124/mol.113.091165. Epub 2014 Feb 21.

50.

Colon cancer cell apoptosis is induced by combined exposure to the n-3 fatty acid docosahexaenoic acid and butyrate through promoter methylation.

Cho Y, Turner ND, Davidson LA, Chapkin RS, Carroll RJ, Lupton JR.

Exp Biol Med (Maywood). 2014 Mar;239(3):302-10. doi: 10.1177/1535370213514927. Epub 2014 Feb 4.

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