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Items: 10

1.

GenomeHubs: simple containerized setup of a custom Ensembl database and web server for any species.

Challis RJ, Kumar S, Stevens L, Blaxter M.

Database (Oxford). 2017 Jan 1;2017. doi: 10.1093/database/bax039.

2.

A high-coverage draft genome of the mycalesine butterfly Bicyclus anynana.

Nowell RW, Elsworth B, Oostra V, Zwaan BJ, Wheat CW, Saastamoinen M, Saccheri IJ, Van't Hof AE, Wasik BR, Connahs H, Aslam ML, Kumar S, Challis RJ, Monteiro A, Brakefield PM, Blaxter M.

Gigascience. 2017 Jul 1;6(7):1-7. doi: 10.1093/gigascience/gix035.

3.

Genomic islands of speciation separate cichlid ecomorphs in an East African crater lake.

Malinsky M, Challis RJ, Tyers AM, Schiffels S, Terai Y, Ngatunga BP, Miska EA, Durbin R, Genner MJ, Turner GF.

Science. 2015 Dec 18;350(6267):1493-1498. doi: 10.1126/science.aac9927.

4.

A role for more axillary growth1 (MAX1) in evolutionary diversity in strigolactone signaling upstream of MAX2.

Challis RJ, Hepworth J, Mouchel C, Waites R, Leyser O.

Plant Physiol. 2013 Apr;161(4):1885-902. doi: 10.1104/pp.112.211383. Epub 2013 Feb 19.

5.

Mitochondrial barcodes are diagnostic of shared refugia but not species in hybridizing oak gallwasps.

Nicholls JA, Challis RJ, Mutun S, Stone GN.

Mol Ecol. 2012 Aug;21(16):4051-62. doi: 10.1111/j.1365-294X.2012.05683.x. Epub 2012 Jun 25.

PMID:
22724511
6.

Phylogeny and DNA barcoding of inquiline oak gallwasps (Hymenoptera: Cynipidae) of the Western Palaearctic.

Acs Z, Challis RJ, Bihari P, Blaxter M, Hayward A, Melika G, Csóka G, Pénzes Z, Pujade-Villar J, Nieves-Aldrey JL, Schönrogge K, Stone GN.

Mol Phylogenet Evol. 2010 Apr;55(1):210-25. doi: 10.1016/j.ympev.2009.12.004. Epub 2009 Dec 21.

PMID:
20004727
7.

The phylogeographical clade trade: tracing the impact of human-mediated dispersal on the colonization of northern Europe by the oak gallwasp Andricus kollari.

Stone GN, Challis RJ, Atkinson RJ, Csóka G, Hayward A, Melika G, Mutun S, Preuss S, Rokas A, Sadeghi E, Schönrogge K.

Mol Ecol. 2007 Jul;16(13):2768-81.

PMID:
17594446
8.

Longitudinal range expansion and cryptic eastern species in the western Palaearctic oak gallwasp, Andricus coriarius.

Challis RJ, Mutun S, Nieves-Aldrey JL, Preuss S, Rokas A, Aebi A, Sadeghi E, Tavakoli M, Stone GN.

Mol Ecol. 2007 May;16(10):2103-14.

PMID:
17498235
9.

Differential var gene transcription in Plasmodium falciparum isolates from patients with cerebral malaria compared to hyperparasitaemia.

Kyriacou HM, Stone GN, Challis RJ, Raza A, Lyke KE, Thera MA, Koné AK, Doumbo OK, Plowe CV, Rowe JA.

Mol Biochem Parasitol. 2006 Dec;150(2):211-8. Epub 2006 Sep 5.

10.

Evolution of spider silks: conservation and diversification of the C-terminus.

Challis RJ, Goodacre SL, Hewitt GM.

Insect Mol Biol. 2006 Feb;15(1):45-56.

PMID:
16469067

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