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Reorganizing Care With the Implementation of Electronic Medical Records: A Time-Motion Study in the PICU.

Roumeliotis N, Parisien G, Charette S, Arpin E, Brunet F, Jouvet P.

Pediatr Crit Care Med. 2018 Jan 11. doi: 10.1097/PCC.0000000000001450. [Epub ahead of print]


A laboratory nanoseismological study on deep-focus earthquake micromechanics.

Wang Y, Zhu L, Shi F, Schubnel A, Hilairet N, Yu T, Rivers M, Gasc J, Addad A, Deldicque D, Li Z, Brunet F.

Sci Adv. 2017 Jul 21;3(7):e1601896. doi: 10.1126/sciadv.1601896. eCollection 2017 Jul.


Expansion by whole genome duplication and evolution of the sox gene family in teleost fish.

Voldoire E, Brunet F, Naville M, Volff JN, Galiana D.

PLoS One. 2017 Jul 24;12(7):e0180936. doi: 10.1371/journal.pone.0180936. eCollection 2017.


Whole Genome Duplications Shaped the Receptor Tyrosine Kinase Repertoire of Jawed Vertebrates.

Brunet FG, Volff JN, Schartl M.

Genome Biol Evol. 2016 Jun 3;8(5):1600-13. doi: 10.1093/gbe/evw103.


Not so bad after all: retroviruses and long terminal repeat retrotransposons as a source of new genes in vertebrates.

Naville M, Warren IA, Haftek-Terreau Z, Chalopin D, Brunet F, Levin P, Galiana D, Volff JN.

Clin Microbiol Infect. 2016 Apr;22(4):312-323. doi: 10.1016/j.cmi.2016.02.001. Epub 2016 Feb 17. Review.


The evolutionary conservation of the A Disintegrin-like and Metalloproteinase domain with Thrombospondin-1 motif metzincins across vertebrate species and their expression in teleost zebrafish.

Brunet FG, Fraser FW, Binder MJ, Smith AD, Kintakas C, Dancevic CM, Ward AC, McCulloch DR.

BMC Evol Biol. 2015 Feb 15;15:22. doi: 10.1186/s12862-015-0281-9.


The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates.

Berthelot C, Brunet F, Chalopin D, Juanchich A, Bernard M, Noël B, Bento P, Da Silva C, Labadie K, Alberti A, Aury JM, Louis A, Dehais P, Bardou P, Montfort J, Klopp C, Cabau C, Gaspin C, Thorgaard GH, Boussaha M, Quillet E, Guyomard R, Galiana D, Bobe J, Volff JN, Genêt C, Wincker P, Jaillon O, Roest Crollius H, Guiguen Y.

Nat Commun. 2014 Apr 22;5:3657. doi: 10.1038/ncomms4657.


Estrogen-related receptor γ is an in vivo receptor of bisphenol A.

Tohmé M, Prud'homme SM, Boulahtouf A, Samarut E, Brunet F, Bernard L, Bourguet W, Gibert Y, Balaguer P, Laudet V.

FASEB J. 2014 Jul;28(7):3124-33. doi: 10.1096/fj.13-240465. Epub 2014 Apr 17.


Enhanced olivine carbonation within a basalt as compared to single-phase experiments: reevaluating the potential of CO2 mineral sequestration.

Sissmann O, Brunet F, Martinez I, Guyot F, Verlaguet A, Pinquier Y, Daval D.

Environ Sci Technol. 2014 May 20;48(10):5512-9. doi: 10.1021/es405508a. Epub 2014 May 1.


Gene amplification and functional diversification of melanocortin 4 receptor at an extremely polymorphic locus controlling sexual maturation in the platyfish.

Volff JN, Selz Y, Hoffmann C, Froschauer A, Schultheis C, Schmidt C, Zhou Q, Bernhardt W, Hanel R, Böhne A, Brunet F, Ségurens B, Couloux A, Bernard-Samain S, Barbe V, Ozouf-Costaz C, Galiana D, Lohse MJ, Schartl M.

Genetics. 2013 Dec;195(4):1337-52. doi: 10.1534/genetics.113.155952. Epub 2013 Sep 27.


Deep-focus earthquake analogs recorded at high pressure and temperature in the laboratory.

Schubnel A, Brunet F, Hilairet N, Gasc J, Wang Y, Green HW 2nd.

Science. 2013 Sep 20;341(6152):1377-80. doi: 10.1126/science.1240206.


Molecular evolutionary routes that lead to innovations.

Brunet F, Innan H, Liao BY, Wang W.

Int J Evol Biol. 2012;2012:483176. doi: 10.1155/2012/483176. Epub 2012 Oct 4. No abstract available.


Molecular adaptation and resilience of the insect's nuclear receptor USP.

Chaumot A, Da Lage JL, Maestro O, Martin D, Iwema T, Brunet F, Belles X, Laudet V, Bonneton F.

BMC Evol Biol. 2012 Oct 5;12:199. doi: 10.1186/1471-2148-12-199.


Fasting induces CART down-regulation in the zebrafish nervous system in a cannabinoid receptor 1-dependent manner.

Nishio S, Gibert Y, Berekelya L, Bernard L, Brunet F, Guillot E, Le Bail JC, Sánchez JA, Galzin AM, Triqueneaux G, Laudet V.

Mol Endocrinol. 2012 Aug;26(8):1316-26. doi: 10.1210/me.2011-1180. Epub 2012 Jun 14.


Expression and phylogeny of candidate genes for sex differentiation in a primitive fish species, the Siberian sturgeon, Acipenser baerii.

Berbejillo J, Martinez-Bengochea A, Bedo G, Brunet F, Volff JN, Vizziano-Cantonnet D.

Mol Reprod Dev. 2012 Aug;79(8):504-16. doi: 10.1002/mrd.22053. Epub 2012 Jul 12.


Electron paramagnetic resonance spectroscopic evidence for the interaction of HAlOH with water molecules.

Brunet FD, Joly HA.

J Phys Chem A. 2012 May 3;116(17):4267-73. doi: 10.1021/jp2103462. Epub 2012 Apr 19.


1-kilowatt CW all-fiber laser oscillator pumped with wavelength-beam-combined diode stacks.

Xiao Y, Brunet F, Kanskar M, Faucher M, Wetter A, Holehouse N.

Opt Express. 2012 Jan 30;20(3):3296-301. doi: 10.1364/OE.20.003296.


Activation of C-O and C-C bonds and formation of novel HAlOH-ether complexes: an EPR study of the reaction of ground-state Al atoms with methylethyl ether and diethyl ether.

Brunet FD, Feola JC, Joly HA.

J Phys Chem A. 2012 Mar 15;116(10):2439-52. doi: 10.1021/jp210425g. Epub 2012 Mar 1.


27Al and 29Si solid-state NMR characterization of calcium-aluminosilicate-hydrate.

Pardal X, Brunet F, Charpentier T, Pochard I, Nonat A.

Inorg Chem. 2012 Feb 6;51(3):1827-36. doi: 10.1021/ic202124x. Epub 2012 Jan 25.


The N-terminal domains of TRF1 and TRF2 regulate their ability to condense telomeric DNA.

Poulet A, Pisano S, Faivre-Moskalenko C, Pei B, Tauran Y, Haftek-Terreau Z, Brunet F, Le Bihan YV, Ledu MH, Montel F, Hugo N, Amiard S, Argoul F, Chaboud A, Gilson E, Giraud-Panis MJ.

Nucleic Acids Res. 2012 Mar;40(6):2566-76. doi: 10.1093/nar/gkr1116. Epub 2011 Dec 1.


Stable carbon isotope evidence for nitrogenous fertilizer impact on carbonate weathering in a small agricultural watershed.

Brunet F, Potot C, Probst A, Probst JL.

Rapid Commun Mass Spectrom. 2011 Oct 15;25(19):2682-90. doi: 10.1002/rcm.5050.


Evolution of retinoid and steroid signaling: vertebrate diversification from an amphioxus perspective.

Albalat R, Brunet F, Laudet V, Schubert M.

Genome Biol Evol. 2011;3:985-1005. doi: 10.1093/gbe/evr084. Epub 2011 Aug 18.


BMP signaling modulates hepcidin expression in zebrafish embryos independent of hemojuvelin.

Gibert Y, Lattanzi VJ, Zhen AW, Vedder L, Brunet F, Faasse SA, Babitt JL, Lin HY, Hammerschmidt M, Fraenkel PG.

PLoS One. 2011 Jan 21;6(1):e14553. doi: 10.1371/journal.pone.0014553.


Structural shifts of aldehyde dehydrogenase enzymes were instrumental for the early evolution of retinoid-dependent axial patterning in metazoans.

Sobreira TJ, Marlétaz F, Simões-Costa M, Schechtman D, Pereira AC, Brunet F, Sweeney S, Pani A, Aronowicz J, Lowe CJ, Davidson B, Laudet V, Bronner M, de Oliveira PS, Schubert M, Xavier-Neto J.

Proc Natl Acad Sci U S A. 2011 Jan 4;108(1):226-31. doi: 10.1073/pnas.1011223108. Epub 2010 Dec 17.


Seeking optimal renal replacement therapy delivery in intensive care units.

Kocjan M, Brunet FP.

Nephrol Nurs J. 2010 Jan-Feb;37(1):47-52. Review.


Measurement of long-range interatomic distances by solid-state tritium-NMR spectroscopy.

Yuen AK, Lafon O, Charpentier T, Roy M, Brunet F, Berthault P, Sakellariou D, Robert B, Rimsky S, Pillon F, Cintrat JC, Rousseau B.

J Am Chem Soc. 2010 Feb 17;132(6):1734-5. doi: 10.1021/ja908915v.


Overcoming barriers when implementing evidence at the bedside.

Anas R, Brunet F.

Healthc Q. 2009;12(4):72-8.


Origin and evolution of the Notch signalling pathway: an overview from eukaryotic genomes.

Gazave E, Lapébie P, Richards GS, Brunet F, Ereskovsky AV, Degnan BM, Borchiellini C, Vervoort M, Renard E.

BMC Evol Biol. 2009 Oct 13;9:249. doi: 10.1186/1471-2148-9-249.


Genome-wide expression analyses establish dendritic cells as a new osteoclast precursor able to generate bone-resorbing cells more efficiently than monocytes.

Gallois A, Lachuer J, Yvert G, Wierinckx A, Brunet F, Rabourdin-Combe C, Delprat C, Jurdic P, Mazzorana M.

J Bone Miner Res. 2010 Mar;25(3):661-72. doi: 10.1359/jbmr.090829.


Molecular analysis of the sex chromosomes of the platyfish Xiphophorus maculatus: Towards the identification of a new type of master sexual regulator in vertebrates.

Böhne A, Schultheis C, Galiana-Arnoux D, Froschauer A, Zhou Q, Schmidt C, Selz Y, Ozouf-Costaz C, Dettai A, Segurens B, Couloux A, Bernard-Samain S, Barbe V, Chilmonczyk S, Brunet F, Darras A, Tomaszkiewicz M, Semon M, Schartl M, Volff JN.

Integr Zool. 2009 Sep;4(3):277-84. doi: 10.1111/j.1749-4877.2009.00166.x.


Isotopic characteristics of the Garonne River and its tributaries.

Lambs L, Brunet F, Probst JL.

Rapid Commun Mass Spectrom. 2009 Aug 30;23(16):2543-50. doi: 10.1002/rcm.4102.


Physiological response to increasing levels of neurally adjusted ventilatory assist (NAVA).

Lecomte F, Brander L, Jalde F, Beck J, Qui H, Elie C, Slutsky AS, Brunet F, Sinderby C.

Respir Physiol Neurobiol. 2009 Apr 30;166(2):117-24. doi: 10.1016/j.resp.2009.02.015. Epub 2009 Mar 13.


Database of queryable gene expression patterns for Xenopus.

Gilchrist MJ, Christensen MB, Bronchain O, Brunet F, Chesneau A, Fenger U, Geach TJ, Ironfield HV, Kaya F, Kricha S, Lea R, Massé K, Néant I, Paillard E, Parain K, Perron M, Sinzelle L, Souopgui J, Thuret R, Ymlahi-Ouazzani Q, Pollet N.

Dev Dyn. 2009 Jun;238(6):1379-88. doi: 10.1002/dvdy.21940.


Pigmentation pathway evolution after whole-genome duplication in fish.

Braasch I, Brunet F, Volff JN, Schartl M.

Genome Biol Evol. 2009 Nov 25;1:479-93. doi: 10.1093/gbe/evp050.


The fate of the duplicated androgen receptor in fishes: a late neofunctionalization event?

Douard V, Brunet F, Boussau B, Ahrens-Fath I, Vlaeminck-Guillem V, Haendler B, Laudet V, Guiguen Y.

BMC Evol Biol. 2008 Dec 18;8:336. doi: 10.1186/1471-2148-8-336.


Titration and implementation of neurally adjusted ventilatory assist in critically ill patients.

Brander L, Leong-Poi H, Beck J, Brunet F, Hutchison SJ, Slutsky AS, Sinderby C.

Chest. 2009 Mar;135(3):695-703. doi: 10.1378/chest.08-1747. Epub 2008 Nov 18.


The amphioxus genome enlightens the evolution of the thyroid hormone signaling pathway.

Paris M, Brunet F, Markov GV, Schubert M, Laudet V.

Dev Genes Evol. 2008 Dec;218(11-12):667-80. doi: 10.1007/s00427-008-0255-7. Epub 2008 Nov 7.


Appropriateness of diagnosis and orientation of 996 consecutive patients admitted in an emergency department with flow-based organization.

Allo JC, Vigneau JF, Jiang J, Ranerison R, Caroline E, Dabreteau A, Der Sahakian G, Perruche F, Dhainaut JF, Brunet F, Claessens YE.

Eur J Emerg Med. 2009 Feb;16(1):23-8. doi: 10.1097/MEJ.0b013e32830a992d.


Nuclear hormone receptor signaling in amphioxus.

Schubert M, Brunet F, Paris M, Bertrand S, Benoit G, Laudet V.

Dev Genes Evol. 2008 Dec;218(11-12):651-65. doi: 10.1007/s00427-008-0251-y. Epub 2008 Sep 25.


The amphioxus genome illuminates vertebrate origins and cephalochordate biology.

Holland LZ, Albalat R, Azumi K, Benito-Gutiérrez E, Blow MJ, Bronner-Fraser M, Brunet F, Butts T, Candiani S, Dishaw LJ, Ferrier DE, Garcia-Fernàndez J, Gibson-Brown JJ, Gissi C, Godzik A, Hallböök F, Hirose D, Hosomichi K, Ikuta T, Inoko H, Kasahara M, Kasamatsu J, Kawashima T, Kimura A, Kobayashi M, Kozmik Z, Kubokawa K, Laudet V, Litman GW, McHardy AC, Meulemans D, Nonaka M, Olinski RP, Pancer Z, Pennacchio LA, Pestarino M, Rast JP, Rigoutsos I, Robinson-Rechavi M, Roch G, Saiga H, Sasakura Y, Satake M, Satou Y, Schubert M, Sherwood N, Shiina T, Takatori N, Tello J, Vopalensky P, Wada S, Xu A, Ye Y, Yoshida K, Yoshizaki F, Yu JK, Zhang Q, Zmasek CM, de Jong PJ, Osoegawa K, Putnam NH, Rokhsar DS, Satoh N, Holland PW.

Genome Res. 2008 Jul;18(7):1100-11. doi: 10.1101/gr.073676.107. Epub 2008 Jun 18. Erratum in: Genome Res. 2008 Aug;18(8):1380.


Amphioxus postembryonic development reveals the homology of chordate metamorphosis.

Paris M, Escriva H, Schubert M, Brunet F, Brtko J, Ciesielski F, Roecklin D, Vivat-Hannah V, Jamin EL, Cravedi JP, Scanlan TS, Renaud JP, Holland ND, Laudet V.

Curr Biol. 2008 Jun 3;18(11):825-30. doi: 10.1016/j.cub.2008.04.078.


Subject-ventilator synchrony during neural versus pneumatically triggered non-invasive helmet ventilation.

Moerer O, Beck J, Brander L, Costa R, Quintel M, Slutsky AS, Brunet F, Sinderby C.

Intensive Care Med. 2008 Sep;34(9):1615-23. doi: 10.1007/s00134-008-1163-z. Epub 2008 May 30.


Adiponectin and adiponectin receptor genes are coexpressed during zebrafish embryogenesis and regulated by food deprivation.

Nishio S, Gibert Y, Bernard L, Brunet F, Triqueneaux G, Laudet V.

Dev Dyn. 2008 Jun;237(6):1682-90. doi: 10.1002/dvdy.21559.


Transposable elements as drivers of genomic and biological diversity in vertebrates.

Böhne A, Brunet F, Galiana-Arnoux D, Schultheis C, Volff JN.

Chromosome Res. 2008;16(1):203-15. doi: 10.1007/s10577-007-1202-6. Review.


Solid-state NMR characterization of a controlled-pore glass and of the effects of electron irradiation.

Brunet F, Charpentier T, Le Caër S, Renault JP.

Solid State Nucl Magn Reson. 2008 Jan-Feb;33(1-2):1-11. doi: 10.1016/j.ssnmr.2007.12.001. Epub 2007 Dec 27.


Repetitive element-mediated recombination as a mechanism for new gene origination in Drosophila.

Yang S, Arguello JR, Li X, Ding Y, Zhou Q, Chen Y, Zhang Y, Zhao R, Brunet F, Peng L, Long M, Wang W.

PLoS Genet. 2008 Jan;4(1):e3. doi: 10.1371/journal.pgen.0040003. Epub 2007 Nov 27.


OTX5 regulates pineal expression of the zebrafish REV-ERB alpha through a new DNA binding site.

Nishio S, Kakizawa T, Chatelain G, Triqueneaux G, Brunet F, Rambaud J, Lamonerie T, Laudet V.

Mol Endocrinol. 2008 Jan;22(1):23-32. Epub 2007 Sep 13.


Daily variation in endotoxin levels is associated with increased organ failure in critically ill patients.

Klein DJ, Derzko A, Foster D, Seely AJ, Brunet F, Romaschin AD, Marshall JC.

Shock. 2007 Nov;28(5):524-9.


Improved synchrony and respiratory unloading by neurally adjusted ventilatory assist (NAVA) in lung-injured rabbits.

Beck J, Campoccia F, Allo JC, Brander L, Brunet F, Slutsky AS, Sinderby C.

Pediatr Res. 2007 Mar;61(3):289-94.


Influence of neurally adjusted ventilatory assist and positive end-expiratory pressure on breathing pattern in rabbits with acute lung injury.

Allo JC, Beck JC, Brander L, Brunet F, Slutsky AS, Sinderby CA.

Crit Care Med. 2006 Dec;34(12):2997-3004.


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