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Hydra Regeneration: Closing the Loop with Mechanical Processes in Morphogenesis.

Braun E, Keren K.

Bioessays. 2018 Jun 4:e1700204. doi: 10.1002/bies.201700204. [Epub ahead of print] Review.


Comparative genomics reveals a burst of homoplasy-free numt insertions.

Liang B, Wang N, Li N, Kimball RT, Braun EL.

Mol Biol Evol. 2018 May 31. doi: 10.1093/molbev/msy112. [Epub ahead of print]


Comparison of the Chinese bamboo partridge and red Junglefowl genome sequences highlights the importance of demography in genome evolution.

Tiley GP, Kimball RT, Braun EL, Burleigh JG.

BMC Genomics. 2018 May 8;19(1):336. doi: 10.1186/s12864-018-4711-0.


Pressure ulcer-related pelvic osteomyelitis: evaluation of a two-stage surgical strategy (debridement, negative pressure therapy and flap coverage) with prolonged antimicrobial therapy.

Andrianasolo J, Ferry T, Boucher F, Chateau J, Shipkov H, Daoud F, Braun E, Triffault-Fillit C, Perpoint T, Laurent F, Mojallal AA, Chidiac C, Valour F; Lyon BJI study group.

BMC Infect Dis. 2018 Apr 10;18(1):166. doi: 10.1186/s12879-018-3076-y.


Retrospective Analysis of Intrathecal Drug Delivery: Outcomes, Efficacy, and Risk for Cancer-Related Pain at a High Volume Academic Medical Center.

Sayed D, Monroe F, Orr WN, Phadnis M, Khan TW, Braun E, Manion S, Nicol A.

Neuromodulation. 2018 Feb 14. doi: 10.1111/ner.12759. [Epub ahead of print]


Mitochondrial genome diversity and population structure of two western honey bee subspecies in the Republic of South Africa.

Eimanifar A, Kimball RT, Braun EL, Ellis JD.

Sci Rep. 2018 Jan 22;8(1):1333. doi: 10.1038/s41598-018-19759-3.


Reducing Radiation Exposure in Lumbar Transforaminal Epidural Steroid Injections with Pulsed Fluoroscopy: A Randomized, Double-blind, Controlled Clinical Trial.

Braun E, Sack AM, Sayed D, Manion S, Hamm B, Brimacombe M, Tollette M, Khan TW, Orr W, Nicol A.

Pain Physician. 2018 Jan;21(1):53-60.


Duration of viral shedding and factors associated with prolonged shedding among inpatients with influenza treated with oseltamivir: a prospective cohort study.

Khoury J, Szwarcwort M, Kra-Oz Z, Saffuri M, Seh K, Yahalomi T, Braun E, Azzam ZS, Paul M, Neuberger A.

Eur J Clin Microbiol Infect Dis. 2018 Feb;37(2):319-323. doi: 10.1007/s10096-017-3135-0. Epub 2017 Nov 15.


Enteric Delivery of Regenerating Family Member 3 alpha Alters the Intestinal Microbiota and Controls Inflammation in Mice With Colitis.

Darnaud M, Dos Santos A, Gonzalez P, Augui S, Lacoste C, Desterke C, De Hertogh G, Valentino E, Braun E, Zheng J, Boisgard R, Neut C, Dubuquoy L, Chiappini F, Samuel D, Lepage P, Guerrieri F, Doré J, Bréchot C, Moniaux N, Faivre J.

Gastroenterology. 2018 Mar;154(4):1009-1023.e14. doi: 10.1053/j.gastro.2017.11.003. Epub 2017 Nov 11.



Bitterman R, Raz-Pasteur A, Azzam ZS, Karban A, Levy Y, Hayek T, Braun E, Oren I, Bar-Lavi Y, Kassis I, Hussein K, Paul M.

Harefuah. 2017 Sep;156(9):573-577. Hebrew.


Addressing medical needs of adolescents and adults with autism spectrum disorders in a primary care setting.

Saqr Y, Braun E, Porter K, Barnette D, Hanks C.

Autism. 2018 Jan;22(1):51-61. doi: 10.1177/1362361317709970. Epub 2017 Jul 28.


Beall's List Removed: What Stands Between Us and Open Access Predators?

Mimouni M, Braun E, Mimouni FB, Mimouni D, Blumenthal EZ.

Am J Med. 2017 Aug;130(8):e371-e372. doi: 10.1016/j.amjmed.2017.03.040. No abstract available.


Phylogenomic analysis supports multiple instances of polyphyly in the oomycete peronosporalean lineage.

Ascunce MS, Huguet-Tapia JC, Ortiz-Urquiza A, Keyhani NO, Braun EL, Goss EM.

Mol Phylogenet Evol. 2017 Sep;114:199-211. doi: 10.1016/j.ympev.2017.06.013. Epub 2017 Jun 20.


APF530 versus ondansetron, each in a guideline-recommended three-drug regimen, for the prevention of chemotherapy-induced nausea and vomiting due to anthracycline plus cyclophosphamide-based highly emetogenic chemotherapy regimens: a post hoc subgroup analysis of the Phase III randomized MAGIC trial.

Schnadig ID, Agajanian R, Dakhil C, Gabrail N, Vacirca J, Taylor C, Wilks S, Braun E, Mosier MC, Geller RB, Schwartzberg L, Vogelzang N.

Cancer Manag Res. 2017 May 19;9:179-187. doi: 10.2147/CMAR.S129059. eCollection 2017.


How do seemingly non-vagile clades accomplish trans-marine dispersal? Trait and dispersal evolution in the landfowl (Aves: Galliformes).

Hosner PA, Tobias JA, Braun EL, Kimball RT.

Proc Biol Sci. 2017 May 17;284(1854). pii: 20170210. doi: 10.1098/rspb.2017.0210.


Effect of ring rotation upon gas adsorption in SIFSIX-3-M (M = Fe, Ni) pillared square grid networks.

Elsaidi SK, Mohamed MH, Simon CM, Braun E, Pham T, Forrest KA, Xu W, Banerjee D, Space B, Zaworotko MJ, Thallapally PK.

Chem Sci. 2017 Mar 1;8(3):2373-2380. doi: 10.1039/c6sc05012c. Epub 2016 Dec 19.


Evolution of the 3R-MYB Gene Family in Plants.

Feng G, Burleigh JG, Braun EL, Mei W, Barbazuk WB.

Genome Biol Evol. 2017 Apr 20. doi: 10.1093/gbe/evx056. [Epub ahead of print]


Why Do Phylogenomic Data Sets Yield Conflicting Trees? Data Type Influences the Avian Tree of Life more than Taxon Sampling.

Reddy S, Kimball RT, Pandey A, Hosner PA, Braun MJ, Hackett SJ, Han KL, Harshman J, Huddleston CJ, Kingston S, Marks BD, Miglia KJ, Moore WS, Sheldon FH, Witt CC, Yuri T, Braun EL.

Syst Biol. 2017 Sep 1;66(5):857-879. doi: 10.1093/sysbio/syx041.


Novel role of insulin in the regulation of glucose excretion by mourning doves (Zenaida macroura).

Sweazea KL, Braun EJ, Sparr R.

Zoology (Jena). 2017 Jun;122:58-62. doi: 10.1016/j.zool.2017.02.006. Epub 2017 Feb 20.


Pulmonary Sarcomatoid Carcinomas Commonly Harbor Either Potentially Targetable Genomic Alterations or High Tumor Mutational Burden as Observed by Comprehensive Genomic Profiling.

Schrock AB, Li SD, Frampton GM, Suh J, Braun E, Mehra R, Buck SC, Bufill JA, Peled N, Karim NA, Hsieh KC, Doria M, Knost J, Chen R, Ou SI, Ross JS, Stephens PJ, Fishkin P, Miller VA, Ali SM, Halmos B, Liu JJ.

J Thorac Oncol. 2017 Jun;12(6):932-942. doi: 10.1016/j.jtho.2017.03.005. Epub 2017 Mar 16.


Structural Inheritance of the Actin Cytoskeletal Organization Determines the Body Axis in Regenerating Hydra.

Livshits A, Shani-Zerbib L, Maroudas-Sacks Y, Braun E, Keren K.

Cell Rep. 2017 Feb 7;18(6):1410-1421. doi: 10.1016/j.celrep.2017.01.036.


Historical relationships of three enigmatic phasianid genera (Aves: Galliformes) inferred using phylogenomic and mitogenomic data.

Wang N, Hosner PA, Liang B, Braun EL, Kimball RT.

Mol Phylogenet Evol. 2017 Apr;109:217-225. doi: 10.1016/j.ympev.2017.01.006. Epub 2017 Jan 11.


Adsorbate-induced lattice deformation in IRMOF-74 series.

Jawahery S, Simon CM, Braun E, Witman M, Tiana D, Vlaisavljevich B, Smit B.

Nat Commun. 2017 Jan 9;8:13945. doi: 10.1038/ncomms13945.


Statistical mechanical model of gas adsorption in porous crystals with dynamic moieties.

Simon CM, Braun E, Carraro C, Smit B.

Proc Natl Acad Sci U S A. 2017 Jan 17;114(3):E287-E296. doi: 10.1073/pnas.1613874114. Epub 2017 Jan 3.


Dietary Intervention for Glucose Tolerance In Teens (DIG IT): Protocol of a randomized controlled trial using health coaching to prevent youth-onset type 2 diabetes.

Wagner KA, Braun E, Armah SM, Horan D, Smith LG, Pike J, Tu W, Hamilton MT, Delp EJ, Campbell WW, Boushey CJ, Hannon TS, Gletsu-Miller N.

Contemp Clin Trials. 2017 Feb;53:171-177. doi: 10.1016/j.cct.2016.12.018. Epub 2016 Dec 21.


Teicoplanin-based antimicrobial therapy in Staphylococcus aureus bone and joint infection: tolerance, efficacy and experience with subcutaneous administration.

Peeters O, Ferry T, Ader F, Boibieux A, Braun E, Bouaziz A, Karsenty J, Forestier E, Laurent F, Lustig S, Chidiac C, Valour F; Lyon BJI study group.

BMC Infect Dis. 2016 Nov 3;16(1):622.


Chicken albumin exhibits natural resistance to glycation.

Zuck J, Borges CR, Braun EJ, Sweazea KL.

Comp Biochem Physiol B Biochem Mol Biol. 2017 Jan;203:108-114. doi: 10.1016/j.cbpb.2016.10.003. Epub 2016 Oct 20.


A Small Cysteine-Rich Protein from the Asian Soybean Rust Fungus, Phakopsora pachyrhizi, Suppresses Plant Immunity.

Qi M, Link TI, Müller M, Hirschburger D, Pudake RN, Pedley KF, Braun E, Voegele RT, Baum TJ, Whitham SA.

PLoS Pathog. 2016 Sep 27;12(9):e1005827. doi: 10.1371/journal.ppat.1005827. eCollection 2016 Sep.


Natural history and decolonization strategies for ESBL/carbapenem-resistant Enterobacteriaceae carriage: systematic review and meta-analysis.

Bar-Yoseph H, Hussein K, Braun E, Paul M.

J Antimicrob Chemother. 2016 Oct;71(10):2729-39. doi: 10.1093/jac/dkw221. Epub 2016 Jun 17. Review.


Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication.

Corrochano LM, Kuo A, Marcet-Houben M, Polaino S, Salamov A, Villalobos-Escobedo JM, Grimwood J, Álvarez MI, Avalos J, Bauer D, Benito EP, Benoit I, Burger G, Camino LP, Cánovas D, Cerdá-Olmedo E, Cheng JF, Domínguez A, Eliáš M, Eslava AP, Glaser F, Gutiérrez G, Heitman J, Henrissat B, Iturriaga EA, Lang BF, Lavín JL, Lee SC, Li W, Lindquist E, López-García S, Luque EM, Marcos AT, Martin J, McCluskey K, Medina HR, Miralles-Durán A, Miyazaki A, Muñoz-Torres E, Oguiza JA, Ohm RA, Olmedo M, Orejas M, Ortiz-Castellanos L, Pisabarro AG, Rodríguez-Romero J, Ruiz-Herrera J, Ruiz-Vázquez R, Sanz C, Schackwitz W, Shahriari M, Shelest E, Silva-Franco F, Soanes D, Syed K, Tagua VG, Talbot NJ, Thon MR, Tice H, de Vries RP, Wiebenga A, Yadav JS, Braun EL, Baker SE, Garre V, Schmutz J, Horwitz BA, Torres-Martínez S, Idnurm A, Herrera-Estrella A, Gabaldón T, Grigoriev IV.

Curr Biol. 2016 Jun 20;26(12):1577-1584. doi: 10.1016/j.cub.2016.04.038. Epub 2016 May 26.


Use of Raman spectroscopy to identify carbon nanotube contamination at an analytical balance workstation.

Braun EI, Huang A, Tusa CA, Yukica MA, Pantano P.

J Occup Environ Hyg. 2016 Dec;13(12):915-923.


Whole genome sequence of the emerging oomycete pathogen Pythium insidiosum strain CDC-B5653 isolated from an infected human in the USA.

Ascunce MS, Huguet-Tapia JC, Braun EL, Ortiz-Urquiza A, Keyhani NO, Goss EM.

Genom Data. 2015 Nov 23;7:60-1. doi: 10.1016/j.gdata.2015.11.019. eCollection 2016 Mar.


Sorting out relationships among the grouse and ptarmigan using intron, mitochondrial, and ultra-conserved element sequences.

Persons NW, Hosner PA, Meiklejohn KA, Braun EL, Kimball RT.

Mol Phylogenet Evol. 2016 May;98:123-32. doi: 10.1016/j.ympev.2016.02.003. Epub 2016 Feb 12.


Analysis of a Rapid Evolutionary Radiation Using Ultraconserved Elements: Evidence for a Bias in Some Multispecies Coalescent Methods.

Meiklejohn KA, Faircloth BC, Glenn TC, Kimball RT, Braun EL.

Syst Biol. 2016 Jul;65(4):612-27. doi: 10.1093/sysbio/syw014. Epub 2016 Feb 10.


Dopamine Modulation of Intertemporal Decision-making: Evidence from Parkinson Disease.

Foerde K, Figner B, Doll BB, Woyke IC, Braun EK, Weber EU, Shohamy D.

J Cogn Neurosci. 2016 May;28(5):657-67. doi: 10.1162/jocn_a_00929. Epub 2016 Feb 2.


French Health Technology Assessment of Antineoplastic Drugs Indicated in the Treatment of Solid Tumours: Perspective for Future Trends.

Chouaid C, Borget I, Braun E, Bazil ML, Schaetz D, Rémuzat C, Toumi M.

Target Oncol. 2016 Aug;11(4):515-34. doi: 10.1007/s11523-015-0411-8.



Eyal A, Braun E, Naffaa ME.

Harefuah. 2015 Nov;154(11):701-2, 742. Hebrew.


Pristinamycin in the treatment of MSSA bone and joint infection.

Valour F, Boibieux A, Karsenty J, Vallat MP, Braun E, Perpoint T, Biron F, Laurent F, Lustig S, Chidiac C, Ferry T; Lyon Bone and Joint Infection Study Group.

J Antimicrob Chemother. 2016 Apr;71(4):1063-70. doi: 10.1093/jac/dkv457. Epub 2016 Jan 21.


Linezolid in the Starter Combination for Multidrug-Resistant Tuberculosis: Time to Move on to Group Four?

Grard S, Catho G, Valour F, Bouaziz A, Perpoint T, Braun E, Biron F, Miailhes P, Ferry T, Chidiac C, Souquet PJ, Couraud S, Lina G, Goutelle S, Veziris N, Dumitrescu O, Ader F.

Open Forum Infect Dis. 2015 Dec 22;2(4):ofv175. doi: 10.1093/ofid/ofv175. eCollection 2015 Dec.


Avoiding Missing Data Biases in Phylogenomic Inference: An Empirical Study in the Landfowl (Aves: Galliformes).

Hosner PA, Faircloth BC, Glenn TC, Braun EL, Kimball RT.

Mol Biol Evol. 2016 Apr;33(4):1110-25. doi: 10.1093/molbev/msv347. Epub 2015 Dec 29.


Oxidative-stress detoxification and signalling in cyanobacteria: the crucial glutathione synthesis pathway supports the production of ergothioneine and ophthalmate.

Narainsamy K, Farci S, Braun E, Junot C, Cassier-Chauvat C, Chauvat F.

Mol Microbiol. 2016 Apr;100(1):15-24. doi: 10.1111/mmi.13296. Epub 2016 Feb 9.


Toxicity assessment and bioaccumulation in zebrafish embryos exposed to carbon nanotubes suspended in Pluronic® F-108.

Wang R, N Meredith A, Lee M Jr, Deutsch D, Miadzvedskaya L, Braun E, Pantano P, Harper S, Draper R.

Nanotoxicology. 2016 Aug;10(6):689-98. doi: 10.3109/17435390.2015.1107147. Epub 2015 Nov 11.


French Health Technology Assessment Of Antineoplastic Drugs Indicated In The Treatment Of Solid Tumours: Perspective For Future Trends.

Chouaid C, Borget I, Braun E, Bazil M, Schaetz D, Rémuzat C, Toumi M.

Value Health. 2015 Nov;18(7):A489. doi: 10.1016/j.jval.2015.09.1353. Epub 2015 Oct 20. No abstract available.


CAGE profiling of ncRNAs in hepatocellular carcinoma reveals widespread activation of retroviral LTR promoters in virus-induced tumors.

Hashimoto K, Suzuki AM, Dos Santos A, Desterke C, Collino A, Ghisletti S, Braun E, Bonetti A, Fort A, Qin XY, Radaelli E, Kaczkowski B, Forrest AR, Kojima S, Samuel D, Natoli G, Buendia MA, Faivre J, Carninci P.

Genome Res. 2015 Dec;25(12):1812-24. doi: 10.1101/gr.191031.115. Epub 2015 Oct 28.


Conductive Hearing Loss in Association With Urate Deposits in the Middle Ear.

Braun EM, Karpf EF, Bachna-Rotter S, Lackner A, Ropposch T, Walch C, Tomazic PV.

Otol Neurotol. 2016 Sep;37(8):e252-3. doi: 10.1097/MAO.0000000000000858. No abstract available.


Nanoporous Materials Can Tune the Critical Point of a Pure Substance.

Braun E, Chen JJ, Schnell SK, Lin LC, Reimer JA, Smit B.

Angew Chem Int Ed Engl. 2015 Nov 23;54(48):14349-52. doi: 10.1002/anie.201506865. Epub 2015 Sep 30.


Single-cell protein dynamics reproduce universal fluctuations in cell populations.

Brenner N, Braun E, Yoney A, Susman L, Rotella J, Salman H.

Eur Phys J E Soft Matter. 2015 Sep;38(9):102. doi: 10.1140/epje/i2015-15102-8. Epub 2015 Sep 28.


Response to Comment on "Whole-genome analyses resolve early branches in the tree of life of modern birds".

Cracraft J, Houde P, Ho SY, Mindell DP, Fjeldså J, Lindow B, Edwards SV, Rahbek C, Mirarab S, Warnow T, Gilbert MT, Zhang G, Braun EL, Jarvis ED.

Science. 2015 Sep 25;349(6255):1460. doi: 10.1126/science.aab1578.


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