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Items: 1 to 50 of 158

1.

Increased Prevalence of Congenital Heart Disease in Children With Diamond Blackfan Anemia Suggests Unrecognized Diamond Blackfan Anemia as a Cause of Congenital Heart Disease in the General Population: A Report of the Diamond Blackfan Anemia Registry.

Vlachos A, Osorio DS, Atsidaftos E, Kang J, Lababidi ML, Seiden HS, Gruber D, Glader BE, Onel K, Farrar JE, Bodine DM, Aspesi A, Dianzani I, Ramenghi U, Ellis SR, Lipton JM.

Circ Genom Precis Med. 2018 May;11(5):e002044. doi: 10.1161/CIRCGENETICS.117.002044. No abstract available.

PMID:
29748317
2.

Synthesis and Characterization of ZnO/CuO Vertically Aligned Hierarchical Tree-like Nanostructure.

Li Z, Jia M, Abraham B, Blake JC, Bodine D, Newberg JT, Gundlach L.

Langmuir. 2018 Jan 23;34(3):961-969. doi: 10.1021/acs.langmuir.7b02840. Epub 2017 Oct 13.

PMID:
28968498
3.

Defective erythropoiesis caused by mutations of the thyroid hormone receptor α gene.

Park S, Han CR, Park JW, Zhao L, Zhu X, Willingham M, Bodine DM, Cheng SY.

PLoS Genet. 2017 Sep 14;13(9):e1006991. doi: 10.1371/journal.pgen.1006991. eCollection 2017 Sep.

4.

Response: Making "perfect" the enemy of good.

Farrar JE, Neuberg D, Triche T Jr, Bodine DM.

Blood. 2017 Aug 31;130(9):1168-1169. doi: 10.1182/blood-2017-07-789107. Epub 2017 Jul 28. No abstract available.

PMID:
28754684
5.

SigSeeker: a peak-calling ensemble approach for constructing epigenetic signatures.

Lichtenberg J, Elnitski L, Bodine DM.

Bioinformatics. 2017 Sep 1;33(17):2615-2621. doi: 10.1093/bioinformatics/btx276.

6.

Molecular convergence in ex vivo models of Diamond-Blackfan anemia.

O'Brien KA, Farrar JE, Vlachos A, Anderson SM, Tsujiura CA, Lichtenberg J, Blanc L, Atsidaftos E, Elkahloun A, An X, Ellis SR, Lipton JM, Bodine DM.

Blood. 2017 Jun 8;129(23):3111-3120. doi: 10.1182/blood-2017-01-760462. Epub 2017 Apr 4.

PMID:
28377399
7.

Introduction to the review series on transcription factors in hematopoiesis and hematologic disease.

Bodine DM.

Blood. 2017 Apr 13;129(15):2039. doi: 10.1182/blood-2017-02-766840. Epub 2017 Feb 8. No abstract available.

8.

Reversible binding of hemoglobin to band 3 constitutes the molecular switch that mediates O2 regulation of erythrocyte properties.

Chu H, McKenna MM, Krump NA, Zheng S, Mendelsohn L, Thein SL, Garrett LJ, Bodine DM, Low PS.

Blood. 2016 Dec 8;128(23):2708-2716. Epub 2016 Sep 29.

9.

Single-cell profiling of human megakaryocyte-erythroid progenitors identifies distinct megakaryocyte and erythroid differentiation pathways.

Psaila B, Barkas N, Iskander D, Roy A, Anderson S, Ashley N, Caputo VS, Lichtenberg J, Loaiza S, Bodine DM, Karadimitris A, Mead AJ, Roberts I.

Genome Biol. 2016 May 3;17:83. doi: 10.1186/s13059-016-0939-7.

10.

SBR-Blood: systems biology repository for hematopoietic cells.

Lichtenberg J, Heuston EF, Mishra T, Keller CA, Hardison RC, Bodine DM.

Nucleic Acids Res. 2016 Jan 4;44(D1):D925-31. doi: 10.1093/nar/gkv1263. Epub 2015 Nov 20.

11.

Functional Niche Competition Between Normal Hematopoietic Stem and Progenitor Cells and Myeloid Leukemia Cells.

Glait-Santar C, Desmond R, Feng X, Bat T, Chen J, Heuston E, Mizukawa B, Mulloy JC, Bodine DM, Larochelle A, Dunbar CE.

Stem Cells. 2015 Dec;33(12):3635-42. doi: 10.1002/stem.2208. Epub 2015 Oct 5.

12.

Necdin is a breast cancer metastasis suppressor that regulates the transcription of c-Myc.

Lee M, Beggs SM, Gildea D, Bupp S, Lichtenberg J, Trivedi NS; NISC Comparative Sequencing Program, Hu Y, Bodine DM, Crawford NP.

Oncotarget. 2015 Oct 13;6(31):31557-68. doi: 10.18632/oncotarget.5230.

13.

An international effort to cure a global health problem: A report on the 19th Hemoglobin Switching Conference.

Blobel GA, Bodine D, Brand M, Crispino J, de Bruijn MF, Nathan D, Papayannopoulou T, Porcher C, Strouboulis J, Zon L, Higgs DR, Stamatoyannopoulos G, Engel JD.

Exp Hematol. 2015 Oct;43(10):821-37. doi: 10.1016/j.exphem.2015.06.008. Epub 2015 Jul 2. Review.

14.

The COP9 signalosome is vital for timely repair of DNA double-strand breaks.

Meir M, Galanty Y, Kashani L, Blank M, Khosravi R, Fernández-Ávila MJ, Cruz-García A, Star A, Shochot L, Thomas Y, Garrett LJ, Chamovitz DA, Bodine DM, Kurz T, Huertas P, Ziv Y, Shiloh Y.

Nucleic Acids Res. 2015 May 19;43(9):4517-30. doi: 10.1093/nar/gkv270. Epub 2015 Apr 8.

15.

Multiple mutations in the para-sodium channel gene are associated with pyrethroid resistance in Rhipicephalus microplus from the United States and Mexico.

Stone NE, Olafson PU, Davey RB, Buckmeier G, Bodine D, Sidak-Loftis LC, Giles JR, Duhaime R, Miller RJ, Mosqueda J, Scoles GA, Wagner DM, Busch JD.

Parasit Vectors. 2014 Oct 1;7:456. doi: 10.1186/s13071-014-0456-z.

16.

Introduction to the review series on "bone marrow failure".

Bodine D, Berliner N.

Blood. 2014 Oct 30;124(18):2755. doi: 10.1182/blood-2014-08-587394. Epub 2014 Sep 18. No abstract available.

17.

Metastasis-associated protein ribosomal RNA processing 1 homolog B (RRP1B) modulates metastasis through regulation of histone methylation.

Lee M, Dworkin AM, Lichtenberg J, Patel SJ, Trivedi NS, Gildea D, Bodine DM, Crawford NP.

Mol Cancer Res. 2014 Dec;12(12):1818-28. doi: 10.1158/1541-7786.MCR-14-0167. Epub 2014 Aug 4.

18.

Exploiting pre-rRNA processing in Diamond Blackfan anemia gene discovery and diagnosis.

Farrar JE, Quarello P, Fisher R, O'Brien KA, Aspesi A, Parrella S, Henson AL, Seidel NE, Atsidaftos E, Prakash S, Bari S, Garelli E, Arceci RJ, Dianzani I, Ramenghi U, Vlachos A, Lipton JM, Bodine DM, Ellis SR.

Am J Hematol. 2014 Oct;89(10):985-91. doi: 10.1002/ajh.23807. Epub 2014 Aug 4.

19.

Widespread movement of invasive cattle fever ticks (Rhipicephalus microplus) in southern Texas leads to shared local infestations on cattle and deer.

Busch JD, Stone NE, Nottingham R, Araya-Anchetta A, Lewis J, Hochhalter C, Giles JR, Gruendike J, Freeman J, Buckmeier G, Bodine D, Duhaime R, Miller RJ, Davey RB, Olafson PU, Scoles GA, Wagner DM.

Parasit Vectors. 2014 Apr 17;7:188. doi: 10.1186/1756-3305-7-188.

20.

Lineage and species-specific long noncoding RNAs during erythro-megakaryocytic development.

Paralkar VR, Mishra T, Luan J, Yao Y, Kossenkov AV, Anderson SM, Dunagin M, Pimkin M, Gore M, Sun D, Konuthula N, Raj A, An X, Mohandas N, Bodine DM, Hardison RC, Weiss MJ.

Blood. 2014 Mar 20;123(12):1927-37. doi: 10.1182/blood-2013-12-544494. Epub 2014 Feb 4.

21.

From helix to hematology: introduction to a collection of reviews on the emerging role of next-generation sequencing in hematology.

Bodine DM.

Blood. 2013 Nov 7;122(19):3239-40. doi: 10.1182/blood-2013-08-519678. Epub 2013 Sep 9. No abstract available.

22.

Diminutive somatic deletions in the 5q region lead to a phenotype atypical of classical 5q- syndrome.

Vlachos A, Farrar JE, Atsidaftos E, Muir E, Narla A, Markello TC, Singh SA, Landowski M, Gazda HT, Blanc L, Liu JM, Ellis SR, Arceci RJ, Ebert BL, Bodine DM, Lipton JM.

Blood. 2013 Oct 3;122(14):2487-90. doi: 10.1182/blood-2013-06-509935. Epub 2013 Aug 13.

23.

Distribution patterns of three sodium channel mutations associated with pyrethroid resistance in Rhipicephalus (Boophilus) microplus populations from North and South America, South Africa and Australia.

Lovis L, Guerrero FD, Miller RJ, Bodine DM, Betschart B, Sager H.

Int J Parasitol Drugs Drug Resist. 2012 Sep 3;2:216-24. doi: 10.1016/j.ijpddr.2012.08.001. eCollection 2012 Dec.

24.

A tissue-specific chromatin loop activates the erythroid ankyrin-1 promoter.

Yocum AO, Steiner LA, Seidel NE, Cline AP, Rout ED, Lin JY, Wong C, Garrett LJ, Gallagher PG, Bodine DM.

Blood. 2012 Oct 25;120(17):3586-93. doi: 10.1182/blood-2012-08-450262. Epub 2012 Sep 11.

25.

Transcription factor zinc finger and BTB domain 1 is essential for lymphocyte development.

Punwani D, Simon K, Choi Y, Dutra A, Gonzalez-Espinosa D, Pak E, Naradikian M, Song CH, Zhang J, Bodine DM, Puck JM.

J Immunol. 2012 Aug 1;189(3):1253-64. doi: 10.4049/jimmunol.1200623. Epub 2012 Jun 29.

26.

Genome-wide DNA methylation profiles in hematopoietic stem and progenitor cells reveal overrepresentation of ETS transcription factor binding sites.

Hogart A, Lichtenberg J, Ajay SS, Anderson S; NIH Intramural Sequencing Center, Margulies EH, Bodine DM.

Genome Res. 2012 Aug;22(8):1407-18. doi: 10.1101/gr.132878.111. Epub 2012 Jun 8.

27.

Sensitive quantification of mosaicism using high density SNP arrays and the cumulative distribution function.

Markello TC, Carlson-Donohoe H, Sincan M, Adams D, Bodine DM, Farrar JE, Vlachos A, Lipton JM, Auerbach AD, Ostrander EA, Chandrasekharappa SC, Boerkoel CF, Gahl WA.

Mol Genet Metab. 2012 Apr;105(4):665-71. doi: 10.1016/j.ymgme.2011.12.015. Epub 2011 Dec 24.

28.

Ribosomal protein gene deletions in Diamond-Blackfan anemia.

Farrar JE, Vlachos A, Atsidaftos E, Carlson-Donohoe H, Markello TC, Arceci RJ, Ellis SR, Lipton JM, Bodine DM.

Blood. 2011 Dec 22;118(26):6943-51. doi: 10.1182/blood-2011-08-375170. Epub 2011 Nov 1.

29.

Genome-wide ChIP-Seq reveals a dramatic shift in the binding of the transcription factor erythroid Kruppel-like factor during erythrocyte differentiation.

Pilon AM, Ajay SS, Kumar SA, Steiner LA, Cherukuri PF, Wincovitch S, Anderson SM; NISC Comparative Sequencing Center, Mullikin JC, Gallagher PG, Hardison RC, Margulies EH, Bodine DM.

Blood. 2011 Oct 27;118(17):e139-48. doi: 10.1182/blood-2011-05-355107. Epub 2011 Sep 6.

30.

Mutation of a barrier insulator in the human ankyrin-1 gene is associated with hereditary spherocytosis.

Gallagher PG, Steiner LA, Liem RI, Owen AN, Cline AP, Seidel NE, Garrett LJ, Bodine DM.

J Clin Invest. 2010 Dec;120(12):4453-65. doi: 10.1172/JCI42240. Epub 2010 Nov 22.

31.

Genome-wide detection of a TFIID localization element from an initial human disease mutation.

Yang MQ, Laflamme K, Gotea V, Joiner CH, Seidel NE, Wong C, Petrykowska HM, Lichtenberg J, Lee S, Welch L, Gallagher PG, Bodine DM, Elnitski L.

Nucleic Acids Res. 2011 Mar;39(6):2175-87. doi: 10.1093/nar/gkq1035. Epub 2010 Nov 11.

32.

A transgenic mouse model demonstrates a dominant negative effect of a point mutation in the RPS19 gene associated with Diamond-Blackfan anemia.

Devlin EE, Dacosta L, Mohandas N, Elliott G, Bodine DM.

Blood. 2010 Oct 14;116(15):2826-35. doi: 10.1182/blood-2010-03-275776. Epub 2010 Jul 6.

33.

Functional analysis of a novel cis-acting regulatory region within the human ankyrin gene (ANK-1) promoter.

Laflamme K, Owen AN, Devlin EE, Yang MQ, Wong C, Steiner LA, Garrett LJ, Elnitski L, Gallagher PG, Bodine DM.

Mol Cell Biol. 2010 Jul;30(14):3493-502. doi: 10.1128/MCB.00119-10. Epub 2010 May 17.

34.

High levels of human gamma-globin are expressed in adult mice carrying a transgene of the Brazilian type of hereditary persistence of fetal hemoglobin ((A)gamma -195).

da Cunha AF, Brugnerotto AF, Corat MA, Devlin EE, Gimenes AP, de Melo MB, Passos LA, Bodine D, Saad ST, Costa FF.

Hemoglobin. 2009;33(6):439-47. doi: 10.3109/03630260903344176.

PMID:
19958189
35.

Adducin forms a bridge between the erythrocyte membrane and its cytoskeleton and regulates membrane cohesion.

Anong WA, Franco T, Chu H, Weis TL, Devlin EE, Bodine DM, An X, Mohandas N, Low PS.

Blood. 2009 Aug 27;114(9):1904-12. doi: 10.1182/blood-2009-02-203216. Epub 2009 Jun 30.

36.

beta-Catenin expression in the bone marrow microenvironment is required for long-term maintenance of primitive hematopoietic cells.

Nemeth MJ, Mak KK, Yang Y, Bodine DM.

Stem Cells. 2009 May;27(5):1109-19. doi: 10.1002/stem.32.

37.

An insulator with barrier-element activity promotes alpha-spectrin gene expression in erythroid cells.

Gallagher PG, Nilson DG, Steiner LA, Maksimova YD, Lin JY, Bodine DM.

Blood. 2009 Feb 12;113(7):1547-54. doi: 10.1182/blood-2008-06-164954. Epub 2008 Nov 13.

38.

Failure of terminal erythroid differentiation in EKLF-deficient mice is associated with cell cycle perturbation and reduced expression of E2F2.

Pilon AM, Arcasoy MO, Dressman HK, Vayda SE, Maksimova YD, Sangerman JI, Gallagher PG, Bodine DM.

Mol Cell Biol. 2008 Dec;28(24):7394-401. doi: 10.1128/MCB.01087-08. Epub 2008 Oct 13.

39.

BP1 motif in the human beta-globin promoter affects beta-globin expression during embryonic/fetal erythropoiesis in transgenic mice bearing the human beta-globin gene.

Zoueva OP, Garrett LJ, Bodine D, Rodgers GP.

Blood Cells Mol Dis. 2008 Nov-Dec;41(3):244-51. doi: 10.1016/j.bcmd.2008.05.008. Epub 2008 Jul 25.

40.

An experimental system for the evaluation of retroviral vector design to diminish the risk for proto-oncogene activation.

Ryu BY, Evans-Galea MV, Gray JT, Bodine DM, Persons DA, Nienhuis AW.

Blood. 2008 Feb 15;111(4):1866-75. Epub 2007 Nov 8.

41.

Wnt5a inhibits canonical Wnt signaling in hematopoietic stem cells and enhances repopulation.

Nemeth MJ, Topol L, Anderson SM, Yang Y, Bodine DM.

Proc Natl Acad Sci U S A. 2007 Sep 25;104(39):15436-41. Epub 2007 Sep 19.

42.
43.

An 11-amino acid beta-hairpin loop in the cytoplasmic domain of band 3 is responsible for ankyrin binding in mouse erythrocytes.

Stefanovic M, Markham NO, Parry EM, Garrett-Beal LJ, Cline AP, Gallagher PG, Low PS, Bodine DM.

Proc Natl Acad Sci U S A. 2007 Aug 28;104(35):13972-7. Epub 2007 Aug 22.

44.

Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome.

Xi H, Shulha HP, Lin JM, Vales TR, Fu Y, Bodine DM, McKay RD, Chenoweth JG, Tesar PJ, Furey TS, Ren B, Weng Z, Crawford GE.

PLoS Genet. 2007 Aug;3(8):e136. Epub 2007 Jul 2.

45.

Hmgb3 regulates the balance between hematopoietic stem cell self-renewal and differentiation.

Nemeth MJ, Kirby MR, Bodine DM.

Proc Natl Acad Sci U S A. 2006 Sep 12;103(37):13783-8. Epub 2006 Aug 31.

46.

Major erythrocyte membrane protein genes in EKLF-deficient mice.

Nilson DG, Sabatino DE, Bodine DM, Gallagher PG.

Exp Hematol. 2006 Jun;34(6):705-12.

PMID:
16728274
47.

Alterations in expression and chromatin configuration of the alpha hemoglobin-stabilizing protein gene in erythroid Kruppel-like factor-deficient mice.

Pilon AM, Nilson DG, Zhou D, Sangerman J, Townes TM, Bodine DM, Gallagher PG.

Mol Cell Biol. 2006 Jun;26(11):4368-77.

48.

Hematology grants K08 and K23.

Bodine DM.

Hematology Am Soc Hematol Educ Program. 2005:538-42.

PMID:
16304433
49.

GATA-1 and Oct-1 are required for expression of the human alpha-hemoglobin-stabilizing protein gene.

Gallagher PG, Liem RI, Wong E, Weiss MJ, Bodine DM.

J Biol Chem. 2005 Nov 25;280(47):39016-23. Epub 2005 Sep 25.

50.

A dinucleotide deletion in the ankyrin promoter alters gene expression, transcription initiation and TFIID complex formation in hereditary spherocytosis.

Gallagher PG, Nilson DG, Wong C, Weisbein JL, Garrett-Beal LJ, Eber SW, Bodine DM.

Hum Mol Genet. 2005 Sep 1;14(17):2501-9. Epub 2005 Jul 21.

PMID:
16037067

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