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Items: 13

1.

Genome sequence-based species delimitation with confidence intervals and improved distance functions.

Meier-Kolthoff JP, Auch AF, Klenk HP, Göker M.

BMC Bioinformatics. 2013 Feb 21;14:60. doi: 10.1186/1471-2105-14-60.

2.

Standard operating procedure for calculating genome-to-genome distances based on high-scoring segment pairs.

Auch AF, Klenk HP, Göker M.

Stand Genomic Sci. 2010 Jan 28;2(1):142-8. doi: 10.4056/sigs.541628.

3.

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison.

Auch AF, von Jan M, Klenk HP, Göker M.

Stand Genomic Sci. 2010 Jan 28;2(1):117-34. doi: 10.4056/sigs.531120.

4.

A Clustering Optimization Strategy for Molecular Taxonomy Applied to Planktonic Foraminifera SSU rDNA.

Göker M, Grimm GW, Auch AF, Aurahs R, Kučera M.

Evol Bioinform Online. 2010 Sep 9;6:97-112.

5.

Methods for comparative metagenomics.

Huson DH, Richter DC, Mitra S, Auch AF, Schuster SC.

BMC Bioinformatics. 2009 Jan 30;10 Suppl 1:S12. doi: 10.1186/1471-2105-10-S1-S12.

6.

MetaSim: a sequencing simulator for genomics and metagenomics.

Richter DC, Ott F, Auch AF, Schmid R, Huson DH.

PLoS One. 2008 Oct 8;3(10):e3373. doi: 10.1371/journal.pone.0003373.

7.

AxPcoords & parallel AxParafit: statistical co-phylogenetic analyses on thousands of taxa.

Stamatakis A, Auch AF, Meier-Kolthoff J, Göker M.

BMC Bioinformatics. 2007 Oct 22;8:405.

8.

COPYCAT: cophylogenetic analysis tool.

Meier-Kolthoff JP, Auch AF, Huson DH, Göker M.

Bioinformatics. 2007 Apr 1;23(7):898-900. Epub 2007 Jan 31.

PMID:
17267434
9.

MEGAN analysis of metagenomic data.

Huson DH, Auch AF, Qi J, Schuster SC.

Genome Res. 2007 Mar;17(3):377-86. Epub 2007 Jan 25.

10.

Genome BLAST distance phylogenies inferred from whole plastid and whole mitochondrion genome sequences.

Auch AF, Henz SR, Holland BR, Göker M.

BMC Bioinformatics. 2006 Jul 19;7:350.

11.

Metagenomics to paleogenomics: large-scale sequencing of mammoth DNA.

Poinar HN, Schwarz C, Qi J, Shapiro B, Macphee RD, Buigues B, Tikhonov A, Huson DH, Tomsho LP, Auch A, Rampp M, Miller W, Schuster SC.

Science. 2006 Jan 20;311(5759):392-4. Epub 2005 Dec 20.

12.

Whole-genome prokaryotic phylogeny.

Henz SR, Huson DH, Auch AF, Nieselt-Struwe K, Schuster SC.

Bioinformatics. 2005 May 15;21(10):2329-35. Epub 2004 May 27.

PMID:
15166018
13.

Development and management of a radon assessment strategy suitable for underground railway tunnelling projects.

Purnell CJ, Frommer G, Chan K, Auch AA.

Radiat Prot Dosimetry. 2004;108(4):353-64.

PMID:
15103065

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