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Items: 1 to 20 of 53

1.

Identification of small RNA pathway genes using patterns of phylogenetic conservation and divergence.

Tabach Y, Billi AC, Hayes GD, Newman MA, Zuk O, Gabel H, Kamath R, Yacoby K, Chapman B, Garcia SM, Borowsky M, Kim JK, Ruvkun G.

Nature. 2013 Jan 31;493(7434):694-8. doi: 10.1038/nature11779. Epub 2012 Dec 23.

2.

Effects of ADARs on small RNA processing pathways in C. elegans.

Warf MB, Shepherd BA, Johnson WE, Bass BL.

Genome Res. 2012 Aug;22(8):1488-98. doi: 10.1101/gr.134841.111. Epub 2012 Jun 6.

3.

Adaptation to P element transposon invasion in Drosophila melanogaster.

Khurana JS, Wang J, Xu J, Koppetsch BS, Thomson TC, Nowosielska A, Li C, Zamore PD, Weng Z, Theurkauf WE.

Cell. 2011 Dec 23;147(7):1551-63. doi: 10.1016/j.cell.2011.11.042.

4.

Sex-induced silencing defends the genome of Cryptococcus neoformans via RNAi.

Wang X, Hsueh YP, Li W, Floyd A, Skalsky R, Heitman J.

Genes Dev. 2010 Nov 15;24(22):2566-82. doi: 10.1101/gad.1970910.

5.

Characterizing the role of RNA silencing components in Cryptococcus neoformans.

Janbon G, Maeng S, Yang DH, Ko YJ, Jung KW, Moyrand F, Floyd A, Heitman J, Bahn YS.

Fungal Genet Biol. 2010 Dec;47(12):1070-80. doi: 10.1016/j.fgb.2010.10.005. Epub 2010 Nov 9.

6.

The DNA/RNA-dependent RNA polymerase QDE-1 generates aberrant RNA and dsRNA for RNAi in a process requiring replication protein A and a DNA helicase.

Lee HC, Aalto AP, Yang Q, Chang SS, Huang G, Fisher D, Cha J, Poranen MM, Bamford DH, Liu Y.

PLoS Biol. 2010 Oct 5;8(10). pii: e1000496. doi: 10.1371/journal.pbio.1000496.

7.

Applying genetics and molecular biology to the study of the human pathogen Cryptococcus neoformans.

Chun CD, Madhani HD.

Methods Enzymol. 2010;470:797-831. doi: 10.1016/S0076-6879(10)70033-1. Epub 2010 Mar 1.

8.

The function of the NineTeen Complex (NTC) in regulating spliceosome conformations and fidelity during pre-mRNA splicing.

Hogg R, McGrail JC, O'Keefe RT.

Biochem Soc Trans. 2010 Aug;38(4):1110-5. doi: 10.1042/BST0381110. Review.

9.

Spliceosome discards intermediates via the DEAH box ATPase Prp43p.

Mayas RM, Maita H, Semlow DR, Staley JP.

Proc Natl Acad Sci U S A. 2010 Jun 1;107(22):10020-5. doi: 10.1073/pnas.0906022107. Epub 2010 May 12.

10.

RNAi in budding yeast.

Drinnenberg IA, Weinberg DE, Xie KT, Mower JP, Wolfe KH, Fink GR, Bartel DP.

Science. 2009 Oct 23;326(5952):544-50. doi: 10.1126/science.1176945. Epub 2009 Sep 10.

11.

Regulation of heterochromatin assembly on unpaired chromosomes during Caenorhabditis elegans meiosis by components of a small RNA-mediated pathway.

She X, Xu X, Fedotov A, Kelly WG, Maine EM.

PLoS Genet. 2009 Aug;5(8):e1000624. doi: 10.1371/journal.pgen.1000624. Epub 2009 Aug 28.

12.

Small RNAs as guardians of the genome.

Malone CD, Hannon GJ.

Cell. 2009 Feb 20;136(4):656-68. doi: 10.1016/j.cell.2009.01.045. Review.

13.

Transcriptional scaffolds for heterochromatin assembly.

Cam HP, Chen ES, Grewal SI.

Cell. 2009 Feb 20;136(4):610-4. doi: 10.1016/j.cell.2009.02.004.

14.

Small silencing RNAs: an expanding universe.

Ghildiyal M, Zamore PD.

Nat Rev Genet. 2009 Feb;10(2):94-108. doi: 10.1038/nrg2504. Review.

15.

Splicing factors facilitate RNAi-directed silencing in fission yeast.

Bayne EH, Portoso M, Kagansky A, Kos-Braun IC, Urano T, Ekwall K, Alves F, Rappsilber J, Allshire RC.

Science. 2008 Oct 24;322(5901):602-6. doi: 10.1126/science.1164029.

16.

Origins and evolution of eukaryotic RNA interference.

Shabalina SA, Koonin EV.

Trends Ecol Evol. 2008 Oct;23(10):578-87. doi: 10.1016/j.tree.2008.06.005. Epub 2008 Aug 18. Review.

17.

Improved northern blot method for enhanced detection of small RNA.

Pall GS, Hamilton AJ.

Nat Protoc. 2008;3(6):1077-84. doi: 10.1038/nprot.2008.67.

PMID:
18536652
18.

Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells.

Ghildiyal M, Seitz H, Horwich MD, Li C, Du T, Lee S, Xu J, Kittler EL, Zapp ML, Weng Z, Zamore PD.

Science. 2008 May 23;320(5879):1077-81. doi: 10.1126/science.1157396. Epub 2008 Apr 10.

19.

Splicing promotes rapid and efficient mRNA export in mammalian cells.

Valencia P, Dias AP, Reed R.

Proc Natl Acad Sci U S A. 2008 Mar 4;105(9):3386-91. doi: 10.1073/pnas.0800250105. Epub 2008 Feb 20.

20.

The impact of multiple splice sites in human L1 elements.

Belancio VP, Roy-Engel AM, Deininger P.

Gene. 2008 Mar 31;411(1-2):38-45. doi: 10.1016/j.gene.2007.12.022. Epub 2008 Jan 11.

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