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Items: 1 to 20 of 78

1.

Evolutionary dynamics and functional specialization of plant paralogs formed by whole and small-scale genome duplications.

Carretero-Paulet L, Fares MA.

Mol Biol Evol. 2012 Nov;29(11):3541-51. doi: 10.1093/molbev/mss162. Epub 2012 Jun 24.

PMID:
22734049
2.

Phylogeny and diversification of B-function MADS-box genes in angiosperms: evolutionary and functional implications of a 260-million-year-old duplication.

Kim S, Yoo MJ, Albert VA, Farris JS, Soltis PS, Soltis DE.

Am J Bot. 2004 Dec;91(12):2102-18. doi: 10.3732/ajb.91.12.2102.

3.

Growth of novel epistatic interactions by gene duplication.

Jiang H, Xu L, Gu Z.

Genome Biol Evol. 2011;3:295-301. doi: 10.1093/gbe/evr016. Epub 2011 Mar 14.

4.

Charting the genetic interaction map of a cell.

Costanzo M, Baryshnikova A, Myers CL, Andrews B, Boone C.

Curr Opin Biotechnol. 2011 Feb;22(1):66-74. doi: 10.1016/j.copbio.2010.11.001. Epub 2010 Nov 24. Review.

PMID:
21111604
5.

Genetic interactions reveal the evolutionary trajectories of duplicate genes.

VanderSluis B, Bellay J, Musso G, Costanzo M, Papp B, Vizeacoumar FJ, Baryshnikova A, Andrews B, Boone C, Myers CL.

Mol Syst Biol. 2010 Nov 16;6:429. doi: 10.1038/msb.2010.82.

6.
7.

Ohnologs in the human genome are dosage balanced and frequently associated with disease.

Makino T, McLysaght A.

Proc Natl Acad Sci U S A. 2010 May 18;107(20):9270-4. doi: 10.1073/pnas.0914697107. Epub 2010 May 3.

8.

The genetic landscape of a cell.

Costanzo M, Baryshnikova A, Bellay J, Kim Y, Spear ED, Sevier CS, Ding H, Koh JL, Toufighi K, Mostafavi S, Prinz J, St Onge RP, VanderSluis B, Makhnevych T, Vizeacoumar FJ, Alizadeh S, Bahr S, Brost RL, Chen Y, Cokol M, Deshpande R, Li Z, Lin ZY, Liang W, Marback M, Paw J, San Luis BJ, Shuteriqi E, Tong AH, van Dyk N, Wallace IM, Whitney JA, Weirauch MT, Zhong G, Zhu H, Houry WA, Brudno M, Ragibizadeh S, Papp B, Pál C, Roth FP, Giaever G, Nislow C, Troyanskaya OG, Bussey H, Bader GD, Gingras AC, Morris QD, Kim PM, Kaiser CA, Myers CL, Andrews BJ, Boone C.

Science. 2010 Jan 22;327(5964):425-31. doi: 10.1126/science.1180823.

9.

The evolution of gene duplications: classifying and distinguishing between models.

Innan H, Kondrashov F.

Nat Rev Genet. 2010 Feb;11(2):97-108. doi: 10.1038/nrg2689. Epub 2010 Jan 6. Review.

PMID:
20051986
10.

Evidence for escape from adaptive conflict?

Barkman T, Zhang J.

Nature. 2009 Dec 10;462(7274):E1; discussion E2-3. doi: 10.1038/nature08663.

PMID:
20010636
11.

Systematic mapping of genetic interaction networks.

Dixon SJ, Costanzo M, Baryshnikova A, Andrews B, Boone C.

Annu Rev Genet. 2009;43:601-25. doi: 10.1146/annurev.genet.39.073003.114751. Review.

PMID:
19712041
12.

Metabolic adaptation after whole genome duplication.

van Hoek MJ, Hogeweg P.

Mol Biol Evol. 2009 Nov;26(11):2441-53. doi: 10.1093/molbev/msp160. Epub 2009 Jul 22.

PMID:
19625390
13.

Predicting essential genes based on network and sequence analysis.

Hwang YC, Lin CC, Chang JY, Mori H, Juan HF, Huang HC.

Mol Biosyst. 2009 Dec;5(12):1672-8. doi: 10.1039/B900611G.

PMID:
19452048
14.

Turning a hobby into a job: how duplicated genes find new functions.

Conant GC, Wolfe KH.

Nat Rev Genet. 2008 Dec;9(12):938-50. doi: 10.1038/nrg2482. Review.

PMID:
19015656
15.

Mistranslation-induced protein misfolding as a dominant constraint on coding-sequence evolution.

Drummond DA, Wilke CO.

Cell. 2008 Jul 25;134(2):341-52. doi: 10.1016/j.cell.2008.05.042.

16.

Pervasive and persistent redundancy among duplicated genes in yeast.

Dean EJ, Davis JC, Davis RW, Petrov DA.

PLoS Genet. 2008 Jul 4;4(7):e1000113. doi: 10.1371/journal.pgen.1000113.

17.

Escape from adaptive conflict after duplication in an anthocyanin pathway gene.

Des Marais DL, Rausher MD.

Nature. 2008 Aug 7;454(7205):762-5. doi: 10.1038/nature07092. Epub 2008 Jun 25.

PMID:
18594508
18.

The extensive and condition-dependent nature of epistasis among whole-genome duplicates in yeast.

Musso G, Costanzo M, Huangfu M, Smith AM, Paw J, San Luis BJ, Boone C, Giaever G, Nislow C, Emili A, Zhang Z.

Genome Res. 2008 Jul;18(7):1092-9. doi: 10.1101/gr.076174.108. Epub 2008 May 7.

19.

Exposing the fitness contribution of duplicated genes.

DeLuna A, Vetsigian K, Shoresh N, Hegreness M, Colón-González M, Chao S, Kishony R.

Nat Genet. 2008 May;40(5):676-81. doi: 10.1038/ng.123. Epub 2008 Apr 13.

PMID:
18408719
20.

Defining genetic interaction.

Mani R, St Onge RP, Hartman JL 4th, Giaever G, Roth FP.

Proc Natl Acad Sci U S A. 2008 Mar 4;105(9):3461-6. doi: 10.1073/pnas.0712255105. Epub 2008 Feb 27.

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