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CDD: a Conserved Domain Database for the functional annotation of proteins.

Marchler-Bauer A, Lu S, Anderson JB, Chitsaz F, Derbyshire MK, DeWeese-Scott C, Fong JH, Geer LY, Geer RC, Gonzales NR, Gwadz M, Hurwitz DI, Jackson JD, Ke Z, Lanczycki CJ, Lu F, Marchler GH, Mullokandov M, Omelchenko MV, Robertson CL, Song JS, Thanki N, Yamashita RA, Zhang D, Zhang N, Zheng C, Bryant SH.

Nucleic Acids Res. 2011 Jan;39(Database issue):D225-9. doi: 10.1093/nar/gkq1189. Epub 2010 Nov 24.


Robust detection and genotyping of single feature polymorphisms from gene expression data.

Wang M, Hu X, Li G, Leach LJ, Potokina E, Druka A, Waugh R, Kearsey MJ, Luo Z.

PLoS Comput Biol. 2009 Mar;5(3):e1000317. doi: 10.1371/journal.pcbi.1000317. Epub 2009 Mar 13.


FLO1 is a variable green beard gene that drives biofilm-like cooperation in budding yeast.

Smukalla S, Caldara M, Pochet N, Beauvais A, Guadagnini S, Yan C, Vinces MD, Jansen A, Prevost MC, Latgé JP, Fink GR, Foster KR, Verstrepen KJ.

Cell. 2008 Nov 14;135(4):726-37. doi: 10.1016/j.cell.2008.09.037.


Adjacent positioning of cellular structures enabled by a Cdc42 GTPase-activating protein-mediated zone of inhibition.

Tong Z, Gao XD, Howell AS, Bose I, Lew DJ, Bi E.

J Cell Biol. 2007 Dec 31;179(7):1375-84. doi: 10.1083/jcb.200705160.


Transbilayer phospholipid flipping regulates Cdc42p signaling during polarized cell growth via Rga GTPase-activating proteins.

Saito K, Fujimura-Kamada K, Hanamatsu H, Kato U, Umeda M, Kozminski KG, Tanaka K.

Dev Cell. 2007 Nov;13(5):743-51.


Forkhead proteins control the outcome of transcription factor binding by antiactivation.

Voth WP, Yu Y, Takahata S, Kretschmann KL, Lieb JD, Parker RL, Milash B, Stillman DJ.

EMBO J. 2007 Oct 17;26(20):4324-34. Epub 2007 Sep 27.


Genetic dissection of ethanol tolerance in the budding yeast Saccharomyces cerevisiae.

Hu XH, Wang MH, Tan T, Li JR, Yang H, Leach L, Zhang RM, Luo ZW.

Genetics. 2007 Mar;175(3):1479-87. Epub 2006 Dec 28.


Multiple-interval mapping for ordinal traits.

Li J, Wang S, Zeng ZB.

Genetics. 2006 Jul;173(3):1649-63. Epub 2006 Apr 3.


Flocculation, adhesion and biofilm formation in yeasts.

Verstrepen KJ, Klis FM.

Mol Microbiol. 2006 Apr;60(1):5-15. Review.


Quantitative trait loci mapped to single-nucleotide resolution in yeast.

Deutschbauer AM, Davis RW.

Nat Genet. 2005 Dec;37(12):1333-40. Epub 2005 Nov 6.


Integrating genotypic and expression data in a segregating mouse population to identify 5-lipoxygenase as a susceptibility gene for obesity and bone traits.

Mehrabian M, Allayee H, Stockton J, Lum PY, Drake TA, Castellani LW, Suh M, Armour C, Edwards S, Lamb J, Lusis AJ, Schadt EE.

Nat Genet. 2005 Nov;37(11):1224-33. Epub 2005 Oct 2. Erratum in: Nat Genet. 2005 Dec;37(12):1381.


Intragenic tandem repeats generate functional variability.

Verstrepen KJ, Jansen A, Lewitter F, Fink GR.

Nat Genet. 2005 Sep;37(9):986-90. Epub 2005 Aug 7.


Origins of variation in the fungal cell surface.

Verstrepen KJ, Reynolds TB, Fink GR.

Nat Rev Microbiol. 2004 Jul;2(7):533-40. Review. No abstract available.


The role of Cdc42p GTPase-activating proteins in assembly of the septin ring in yeast.

Caviston JP, Longtine M, Pringle JR, Bi E.

Mol Biol Cell. 2003 Oct;14(10):4051-66. Epub 2003 Jul 25.


Exit from exit: resetting the cell cycle through Amn1 inhibition of G protein signaling.

Wang Y, Shirogane T, Liu D, Harper JW, Elledge SJ.

Cell. 2003 Mar 7;112(5):697-709.


GTPase-activating proteins for Cdc42.

Smith GR, Givan SA, Cullen P, Sprague GF Jr.

Eukaryot Cell. 2002 Jun;1(3):469-80.


Candidate-gene approaches for studying complex genetic traits: practical considerations.

Tabor HK, Risch NJ, Myers RM.

Nat Rev Genet. 2002 May;3(5):391-7. doi: 10.1038/nrg796. Review.


Genetic dissection of transcriptional regulation in budding yeast.

Brem RB, Yvert G, Clinton R, Kruglyak L.

Science. 2002 Apr 26;296(5568):752-5. Epub 2002 Mar 28.


Dissecting the architecture of a quantitative trait locus in yeast.

Steinmetz LM, Sinha H, Richards DR, Spiegelman JI, Oefner PJ, McCusker JH, Davis RW.

Nature. 2002 Mar 21;416(6878):326-30.


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