References for this PMC Article for PMID: 23093777

Year	Number of Results
1999	1
2000	1
2001	3
2002	2
2004	2
2005	5
2006	2
2007	1
2009	1
2010	2
2011	4
2012	3
2024	0

1

HELLP babies link a novel lincRNA to the trophoblast cell cycle.

van Dijk M, Thulluru HK, Mulders J, Michel OJ, Poutsma A, Windhorst S, Kleiverda G, Sie D, Lachmeijer AM, Oudejans CB. van Dijk M, et al. J Clin Invest. 2012 Nov;122(11):4003-11. doi: 10.1172/JCI65171. Epub 2012 Oct 24. J Clin Invest. 2012. PMID: 23093777 Free PMC article. Clinical Trial.

2

Emerging functional and mechanistic paradigms of mammalian long non-coding RNAs.

Moran VA, Perera RJ, Khalil AM. Moran VA, et al. Nucleic Acids Res. 2012 Aug;40(14):6391-400. doi: 10.1093/nar/gks296. Epub 2012 Apr 5. Nucleic Acids Res. 2012. PMID: 22492512 Free PMC article. Review.

3

Modular regulatory principles of large non-coding RNAs.

Guttman M, Rinn JL. Guttman M, et al. Nature. 2012 Feb 15;482(7385):339-46. doi: 10.1038/nature10887. Nature. 2012. PMID: 22337053 Free PMC article. Review.

4

Non-coding RNAs in human disease.

Esteller M. Esteller M. Nat Rev Genet. 2011 Nov 18;12(12):861-74. doi: 10.1038/nrg3074. Nat Rev Genet. 2011. PMID: 22094949 Review.

5

Identification of novel transcripts in annotated genomes using RNA-Seq.

Roberts A, Pimentel H, Trapnell C, Pachter L. Roberts A, et al. Bioinformatics. 2011 Sep 1;27(17):2325-9. doi: 10.1093/bioinformatics/btr355. Epub 2011 Jun 21. Bioinformatics. 2011. PMID: 21697122

6

Computational methods for transcriptome annotation and quantification using RNA-seq.

Garber M, Grabherr MG, Guttman M, Trapnell C. Garber M, et al. Nat Methods. 2011 Jun;8(6):469-77. doi: 10.1038/nmeth.1613. Epub 2011 May 27. Nat Methods. 2011. PMID: 21623353 Free article. Review.

7

Improving RNA-Seq expression estimates by correcting for fragment bias.

Roberts A, Trapnell C, Donaghey J, Rinn JL, Pachter L. Roberts A, et al. Genome Biol. 2011;12(3):R22. doi: 10.1186/gb-2011-12-3-r22. Epub 2011 Mar 16. Genome Biol. 2011. PMID: 21410973 Free PMC article.

8

Rapid in situ codetection of noncoding RNAs and proteins in cells and formalin-fixed paraffin-embedded tissue sections without protease treatment.

de Planell-Saguer M, Rodicio MC, Mourelatos Z. de Planell-Saguer M, et al. Nat Protoc. 2010 Jun;5(6):1061-73. doi: 10.1038/nprot.2010.62. Epub 2010 May 20. Nat Protoc. 2010. PMID: 20539282

9

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.

Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, Salzberg SL, Wold BJ, Pachter L. Trapnell C, et al. Nat Biotechnol. 2010 May;28(5):511-5. doi: 10.1038/nbt.1621. Epub 2010 May 2. Nat Biotechnol. 2010. PMID: 20436464 Free PMC article.

10

TopHat: discovering splice junctions with RNA-Seq.

Trapnell C, Pachter L, Salzberg SL. Trapnell C, et al. Bioinformatics. 2009 May 1;25(9):1105-11. doi: 10.1093/bioinformatics/btp120. Epub 2009 Mar 16. Bioinformatics. 2009. PMID: 19289445 Free PMC article.

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