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Items: 1 to 20 of 121


The Role of RNA Polymerase II Elongation Control in HIV-1 Gene Expression, Replication, and Latency.

Nilson KA, Price DH.

Genet Res Int. 2011;2011:726901. doi: 10.4061/2011/726901. Epub 2011 Oct 13.


Transcription control by long non-coding RNAs.

Faust T, Frankel A, D'Orso I.

Transcription. 2012 Mar-Apr;3(2):78-86. doi: 10.4161/trns.19349. Epub 2012 Mar 1.


Hot spots for allosteric regulation on protein surfaces.

Reynolds KA, McLaughlin RN, Ranganathan R.

Cell. 2011 Dec 23;147(7):1564-75. doi: 10.1016/j.cell.2011.10.049.


The control of HIV transcription: keeping RNA polymerase II on track.

Ott M, Geyer M, Zhou Q.

Cell Host Microbe. 2011 Nov 17;10(5):426-35. doi: 10.1016/j.chom.2011.11.002. Review.


Human Polymerase-Associated Factor complex (PAFc) connects the Super Elongation Complex (SEC) to RNA polymerase II on chromatin.

He N, Chan CK, Sobhian B, Chou S, Xue Y, Liu M, Alber T, Benkirane M, Zhou Q.

Proc Natl Acad Sci U S A. 2011 Sep 6;108(36):E636-45. doi: 10.1073/pnas.1107107108. Epub 2011 Aug 22.


7SK snRNA: a noncoding RNA that plays a major role in regulating eukaryotic transcription.

Peterlin BM, Brogie JE, Price DH.

Wiley Interdiscip Rev RNA. 2012 Jan-Feb;3(1):92-103. doi: 10.1002/wrna.106. Epub 2011 Aug 18.


HIV-1 Tat: Its Dependence on Host Factors is Crystal Clear.

D'Orso I, Frankel AD.

Viruses. 2010 Oct 1;2(10):2226-2234.


Evolutionarily conserved surface residues constitute actin binding sites of tropomyosin.

Barua B, Pamula MC, Hitchcock-DeGregori SE.

Proc Natl Acad Sci U S A. 2011 Jun 21;108(25):10150-5. doi: 10.1073/pnas.1101221108. Epub 2011 Jun 3.


The super elongation complex (SEC) and MLL in development and disease.

Smith E, Lin C, Shilatifard A.

Genes Dev. 2011 Apr 1;25(7):661-72. doi: 10.1101/gad.2015411. Review.


The meaning of pausing.

Espinosa JM.

Mol Cell. 2010 Nov 24;40(4):507-8. doi: 10.1016/j.molcel.2010.11.025.


Pol II waiting in the starting gates: Regulating the transition from transcription initiation into productive elongation.

Nechaev S, Adelman K.

Biochim Biophys Acta. 2011 Jan;1809(1):34-45. doi: 10.1016/j.bbagrm.2010.11.001. Epub 2010 Nov 13. Review.


Pausing of RNA polymerase II disrupts DNA-specified nucleosome organization to enable precise gene regulation.

Gilchrist DA, Dos Santos G, Fargo DC, Xie B, Gao Y, Li L, Adelman K.

Cell. 2010 Nov 12;143(4):540-51. doi: 10.1016/j.cell.2010.10.004.


Controlling cellular P-TEFb activity by the HIV-1 transcriptional transactivator Tat.

Muniz L, Egloff S, Ughy B, Jády BE, Kiss T.

PLoS Pathog. 2010 Oct 14;6(10):e1001152. doi: 10.1371/journal.ppat.1001152.


Transient protein-protein interactions: structural, functional, and network properties.

Perkins JR, Diboun I, Dessailly BH, Lees JG, Orengo C.

Structure. 2010 Oct 13;18(10):1233-43. doi: 10.1016/j.str.2010.08.007. Review.


The metazoan Mediator co-activator complex as an integrative hub for transcriptional regulation.

Malik S, Roeder RG.

Nat Rev Genet. 2010 Nov;11(11):761-72. doi: 10.1038/nrg2901. Epub 2010 Oct 13. Review.


Preformed protein-binding motifs in 7SK snRNA: structural and thermodynamic comparisons with retroviral TAR.

Durney MA, D'Souza VM.

J Mol Biol. 2010 Dec 10;404(4):555-67. doi: 10.1016/j.jmb.2010.08.042. Epub 2010 Sep 15.


The mechanism of release of P-TEFb and HEXIM1 from the 7SK snRNP by viral and cellular activators includes a conformational change in 7SK.

Krueger BJ, Varzavand K, Cooper JJ, Price DH.

PLoS One. 2010 Aug 23;5(8):e12335. doi: 10.1371/journal.pone.0012335.


Kick-sTARting HIV-1 transcription elongation by 7SK snRNP deporTATion.

Barboric M, Lenasi T.

Nat Struct Mol Biol. 2010 Aug;17(8):928-30. doi: 10.1038/nsmb0810-928.


RNA-mediated displacement of an inhibitory snRNP complex activates transcription elongation.

D'Orso I, Frankel AD.

Nat Struct Mol Biol. 2010 Jul;17(7):815-21. doi: 10.1038/nsmb.1827. Epub 2010 Jun 20.


Crystal structure of HIV-1 Tat complexed with human P-TEFb.

Tahirov TH, Babayeva ND, Varzavand K, Cooper JJ, Sedore SC, Price DH.

Nature. 2010 Jun 10;465(7299):747-51. doi: 10.1038/nature09131.

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