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Items: 1 to 20 of 61

1.

Oxidative cleavage of cellulose by fungal copper-dependent polysaccharide monooxygenases.

Beeson WT, Phillips CM, Cate JH, Marletta MA.

J Am Chem Soc. 2012 Jan 18;134(2):890-2. doi: 10.1021/ja210657t. Epub 2011 Dec 28.

PMID:
22188218
2.

CADRE: the Central Aspergillus Data REpository 2012.

Mabey Gilsenan J, Cooley J, Bowyer P.

Nucleic Acids Res. 2012 Jan;40(Database issue):D660-6. doi: 10.1093/nar/gkr971. Epub 2011 Nov 12.

3.

WheatGenome.info: an integrated database and portal for wheat genome information.

Lai K, Berkman PJ, Lorenc MT, Duran C, Smits L, Manoli S, Stiller J, Edwards D.

Plant Cell Physiol. 2012 Feb;53(2):e2. doi: 10.1093/pcp/pcr141. Epub 2011 Oct 18.

PMID:
22009731
4.

Transcriptome analysis of Aspergillus niger grown on sugarcane bagasse.

de Souza WR, de Gouvea PF, Savoldi M, Malavazi I, de Souza Bernardes LA, Goldman MH, de Vries RP, de Castro Oliveira JV, Goldman GH.

Biotechnol Biofuels. 2011 Oct 18;4:40. doi: 10.1186/1754-6834-4-40.

5.

Insights into the oxidative degradation of cellulose by a copper metalloenzyme that exploits biomass components.

Quinlan RJ, Sweeney MD, Lo Leggio L, Otten H, Poulsen JC, Johansen KS, Krogh KB, Jørgensen CI, Tovborg M, Anthonsen A, Tryfona T, Walter CP, Dupree P, Xu F, Davies GJ, Walton PH.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):15079-84. doi: 10.1073/pnas.1105776108. Epub 2011 Aug 29.

6.

Alternatives to Trichoderma reesei in biofuel production.

Gusakov AV.

Trends Biotechnol. 2011 Sep;29(9):419-25. doi: 10.1016/j.tibtech.2011.04.004. Epub 2011 May 24. Review.

PMID:
21612834
7.

Xylose triggers reversible phosphorylation of XlnR, the fungal transcriptional activator of xylanolytic and cellulolytic genes in Aspergillus oryzae.

Noguchi Y, Tanaka H, Kanamaru K, Kato M, Kobayashi T.

Biosci Biotechnol Biochem. 2011;75(5):953-9. Epub 2011 May 20.

8.

Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88.

Andersen MR, Salazar MP, Schaap PJ, van de Vondervoort PJ, Culley D, Thykaer J, Frisvad JC, Nielsen KF, Albang R, Albermann K, Berka RM, Braus GH, Braus-Stromeyer SA, Corrochano LM, Dai Z, van Dijck PW, Hofmann G, Lasure LL, Magnuson JK, Menke H, Meijer M, Meijer SL, Nielsen JB, Nielsen ML, van Ooyen AJ, Pel HJ, Poulsen L, Samson RA, Stam H, Tsang A, van den Brink JM, Atkins A, Aerts A, Shapiro H, Pangilinan J, Salamov A, Lou Y, Lindquist E, Lucas S, Grimwood J, Grigoriev IV, Kubicek CP, Martinez D, van Peij NN, Roubos JA, Nielsen J, Baker SE.

Genome Res. 2011 Jun;21(6):885-97. doi: 10.1101/gr.112169.110. Epub 2011 May 4.

9.

Fungal gene expression on demand: an inducible, tunable, and metabolism-independent expression system for Aspergillus niger.

Meyer V, Wanka F, van Gent J, Arentshorst M, van den Hondel CA, Ram AF.

Appl Environ Microbiol. 2011 May;77(9):2975-83. doi: 10.1128/AEM.02740-10. Epub 2011 Mar 4.

10.

Arsenal of plant cell wall degrading enzymes reflects host preference among plant pathogenic fungi.

King BC, Waxman KD, Nenni NV, Walker LP, Bergstrom GC, Gibson DM.

Biotechnol Biofuels. 2011 Feb 16;4:4. doi: 10.1186/1754-6834-4-4.

11.

Suitability of Vader for transposon-mediated mutagenesis in Aspergillus niger.

Hihlal E, Braumann I, van den Berg M, Kempken F.

Appl Environ Microbiol. 2011 Apr;77(7):2332-6. doi: 10.1128/AEM.02688-10. Epub 2011 Feb 4.

12.

Integrative genomics viewer.

Robinson JT, Thorvaldsdóttir H, Winckler W, Guttman M, Lander ES, Getz G, Mesirov JP.

Nat Biotechnol. 2011 Jan;29(1):24-6. doi: 10.1038/nbt.1754. No abstract available.

13.

The prevalence and regulation of antisense transcripts in Schizosaccharomyces pombe.

Ni T, Tu K, Wang Z, Song S, Wu H, Xie B, Scott KC, Grewal SI, Gao Y, Zhu J.

PLoS One. 2010 Dec 20;5(12):e15271. doi: 10.1371/journal.pone.0015271.

14.

Aspergillus as a multi-purpose cell factory: current status and perspectives.

Meyer V, Wu B, Ram AF.

Biotechnol Lett. 2011 Mar;33(3):469-76. doi: 10.1007/s10529-010-0473-8. Epub 2010 Nov 19. Review.

15.

GenBank.

Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW.

Nucleic Acids Res. 2011 Jan;39(Database issue):D32-7. doi: 10.1093/nar/gkq1079. Epub 2010 Nov 10.

16.

Carbohydrate-binding modules promote the enzymatic deconstruction of intact plant cell walls by targeting and proximity effects.

Hervé C, Rogowski A, Blake AW, Marcus SE, Gilbert HJ, Knox JP.

Proc Natl Acad Sci U S A. 2010 Aug 24;107(34):15293-8. doi: 10.1073/pnas.1005732107. Epub 2010 Aug 9.

17.

Genome sequence of the model mushroom Schizophyllum commune.

Ohm RA, de Jong JF, Lugones LG, Aerts A, Kothe E, Stajich JE, de Vries RP, Record E, Levasseur A, Baker SE, Bartholomew KA, Coutinho PM, Erdmann S, Fowler TJ, Gathman AC, Lombard V, Henrissat B, Knabe N, Kües U, Lilly WW, Lindquist E, Lucas S, Magnuson JK, Piumi F, Raudaskoski M, Salamov A, Schmutz J, Schwarze FW, vanKuyk PA, Horton JS, Grigoriev IV, Wösten HA.

Nat Biotechnol. 2010 Sep;28(9):957-63. doi: 10.1038/nbt.1643. Epub 2010 Jul 11.

PMID:
20622885
18.

Trends and challenges in the microbial production of lignocellulosic bioalcohol fuels.

Weber C, Farwick A, Benisch F, Brat D, Dietz H, Subtil T, Boles E.

Appl Microbiol Biotechnol. 2010 Jul;87(4):1303-15. doi: 10.1007/s00253-010-2707-z. Epub 2010 Jun 10. Review.

PMID:
20535464
19.

Stimulation of lignocellulosic biomass hydrolysis by proteins of glycoside hydrolase family 61: structure and function of a large, enigmatic family.

Harris PV, Welner D, McFarland KC, Re E, Navarro Poulsen JC, Brown K, Salbo R, Ding H, Vlasenko E, Merino S, Xu F, Cherry J, Larsen S, Lo Leggio L.

Biochemistry. 2010 Apr 20;49(15):3305-16. doi: 10.1021/bi100009p.

PMID:
20230050
20.

Systems analysis of plant cell wall degradation by the model filamentous fungus Neurospora crassa.

Tian C, Beeson WT, Iavarone AT, Sun J, Marletta MA, Cate JH, Glass NL.

Proc Natl Acad Sci U S A. 2009 Dec 29;106(52):22157-62. doi: 10.1073/pnas.0906810106. Epub 2009 Dec 15.

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