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Identification of 88 regulatory small RNAs in the TIGR4 strain of the human pathogen Streptococcus pneumoniae.

Acebo P, Martin-Galiano AJ, Navarro S, Zaballos A, Amblar M.

RNA. 2012 Mar;18(3):530-46. doi: 10.1261/rna.027359.111. Epub 2012 Jan 24.


Analysis of microRNA-size, small RNAs in Streptococcus mutans by deep sequencing.

Lee HJ, Hong SH.

FEMS Microbiol Lett. 2012 Jan;326(2):131-6. doi: 10.1111/j.1574-6968.2011.02441.x. Epub 2011 Nov 8.


A Salmonella small non-coding RNA facilitates bacterial invasion and intracellular replication by modulating the expression of virulence factors.

Gong H, Vu GP, Bai Y, Chan E, Wu R, Yang E, Liu F, Lu S.

PLoS Pathog. 2011 Sep;7(9):e1002120. doi: 10.1371/journal.ppat.1002120. Epub 2011 Sep 15.


Global discovery of small RNAs in Yersinia pseudotuberculosis identifies Yersinia-specific small, noncoding RNAs required for virulence.

Koo JT, Alleyne TM, Schiano CA, Jafari N, Lathem WW.

Proc Natl Acad Sci U S A. 2011 Sep 13;108(37):E709-17. doi: 10.1073/pnas.1101655108. Epub 2011 Aug 29.


CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III.

Deltcheva E, Chylinski K, Sharma CM, Gonzales K, Chao Y, Pirzada ZA, Eckert MR, Vogel J, Charpentier E.

Nature. 2011 Mar 31;471(7340):602-7. doi: 10.1038/nature09886.


The Staphylococcus aureus RNome and its commitment to virulence.

Felden B, Vandenesch F, Bouloc P, Romby P.

PLoS Pathog. 2011 Mar;7(3):e1002006. doi: 10.1371/journal.ppat.1002006. Epub 2011 Mar 10. Review.


Identification, variation and transcription of pneumococcal repeat sequences.

Croucher NJ, Vernikos GS, Parkhill J, Bentley SD.

BMC Genomics. 2011 Feb 18;12:120. doi: 10.1186/1471-2164-12-120.


The group A Streptococcus small regulatory RNA FasX enhances streptokinase activity by increasing the stability of the ska mRNA transcript.

Ramirez-Peña E, Treviño J, Liu Z, Perez N, Sumby P.

Mol Microbiol. 2010 Dec;78(6):1332-47. doi: 10.1111/j.1365-2958.2010.07427.x. Epub 2010 Oct 22.


Identification of genes for small non-coding RNAs that belong to the regulon of the two-component regulatory system CiaRH in Streptococcus.

Marx P, Nuhn M, Kovács M, Hakenbeck R, Brückner R.

BMC Genomics. 2010 Nov 24;11:661. doi: 10.1186/1471-2164-11-661.


Genome-wide fitness and genetic interactions determined by Tn-seq, a high-throughput massively parallel sequencing method for microorganisms.

van Opijnen T, Camilli A.

Curr Protoc Microbiol. 2010 Nov;Chapter 1:Unit1E.3. doi: 10.1002/9780471729259.mc01e03s19.


sRNAscanner: a computational tool for intergenic small RNA detection in bacterial genomes.

Sridhar J, Sambaturu N, Sabarinathan R, Ou HY, Deng Z, Sekar K, Rafi ZA, Rajakumar K.

PLoS One. 2010 Aug 5;5(8):e11970. doi: 10.1371/journal.pone.0011970. Erratum in: PLoS One. 2010;5(9). doi: 10.1371/annotation/71408e55-e1d3-4950-9c3b-d3a3ad66a1ff. Narmada, Suryanarayanan Ramkumar [corrected to Sambaturu, Narmada].


Base pairing small RNAs and their roles in global regulatory networks.

Beisel CL, Storz G.

FEMS Microbiol Rev. 2010 Sep;34(5):866-82. doi: 10.1111/j.1574-6976.2010.00241.x. Epub 2010 Jun 23. Review.


Multiple colonization with S. pneumoniae before and after introduction of the seven-valent conjugated pneumococcal polysaccharide vaccine.

Brugger SD, Frey P, Aebi S, Hinds J, Mühlemann K.

PLoS One. 2010 Jul 16;5(7):e11638. doi: 10.1371/journal.pone.0011638.


Regulatory RNA in bacterial pathogens.

Papenfort K, Vogel J.

Cell Host Microbe. 2010 Jul 22;8(1):116-27. doi: 10.1016/j.chom.2010.06.008. Review.


A Staphylococcus aureus small RNA is required for bacterial virulence and regulates the expression of an immune-evasion molecule.

Chabelskaya S, Gaillot O, Felden B.

PLoS Pathog. 2010 Jun 3;6(6):e1000927. doi: 10.1371/journal.ppat.1000927.


Identification of novel non-coding small RNAs from Streptococcus pneumoniae TIGR4 using high-resolution genome tiling arrays.

Kumar R, Shah P, Swiatlo E, Burgess SC, Lawrence ML, Nanduri B.

BMC Genomics. 2010 Jun 3;11:350. doi: 10.1186/1471-2164-11-350.


Staphylococcus aureus RNAIII binds to two distant regions of coa mRNA to arrest translation and promote mRNA degradation.

Chevalier C, Boisset S, Romilly C, Masquida B, Fechter P, Geissmann T, Vandenesch F, Romby P.

PLoS Pathog. 2010 Mar 12;6(3):e1000809. doi: 10.1371/journal.ppat.1000809.


The 4.5S RNA component of the signal recognition particle is required for group A Streptococcus virulence.

Treviño J, Perez N, Sumby P.

Microbiology. 2010 May;156(Pt 5):1342-50. doi: 10.1099/mic.0.036558-0. Epub 2010 Jan 28.


The role of Hfq in bacterial pathogens.

Chao Y, Vogel J.

Curr Opin Microbiol. 2010 Feb;13(1):24-33. doi: 10.1016/j.mib.2010.01.001. Epub 2010 Jan 14. Review.


The smpB-ssrA mutant of Yersinia pestis functions as a live attenuated vaccine to protect mice against pulmonary plague infection.

Okan NA, Mena P, Benach JL, Bliska JB, Karzai AW.

Infect Immun. 2010 Mar;78(3):1284-93. doi: 10.1128/IAI.00976-09. Epub 2010 Jan 11.

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