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Items: 1 to 20 of 68


HITS-CLIP: panoramic views of protein-RNA regulation in living cells.

Darnell RB.

Wiley Interdiscip Rev RNA. 2010 Sep-Oct;1(2):266-86. doi: 10.1002/wrna.31. Epub 2010 Aug 2. Review.


Functional consequences of developmentally regulated alternative splicing.

Kalsotra A, Cooper TA.

Nat Rev Genet. 2011 Sep 16;12(10):715-29. doi: 10.1038/nrg3052. Review.


FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism.

Darnell JC, Van Driesche SJ, Zhang C, Hung KY, Mele A, Fraser CE, Stone EF, Chen C, Fak JJ, Chi SW, Licatalosi DD, Richter JD, Darnell RB.

Cell. 2011 Jul 22;146(2):247-61. doi: 10.1016/j.cell.2011.06.013.


Mapping in vivo protein-RNA interactions at single-nucleotide resolution from HITS-CLIP data.

Zhang C, Darnell RB.

Nat Biotechnol. 2011 Jun 1;29(7):607-14. doi: 10.1038/nbt.1873.


U1 snRNA directly interacts with polypyrimidine tract-binding protein during splicing repression.

Sharma S, Maris C, Allain FH, Black DL.

Mol Cell. 2011 Mar 4;41(5):579-88. doi: 10.1016/j.molcel.2011.02.012.


Characterizing the RNA targets and position-dependent splicing regulation by TDP-43.

Tollervey JR, Curk T, Rogelj B, Briese M, Cereda M, Kayikci M, König J, Hortobágyi T, Nishimura AL, Zupunski V, Patani R, Chandran S, Rot G, Zupan B, Shaw CE, Ule J.

Nat Neurosci. 2011 Apr;14(4):452-8. doi: 10.1038/nn.2778. Epub 2011 Feb 27.


Understanding splicing regulation through RNA splicing maps.

Witten JT, Ule J.

Trends Genet. 2011 Mar;27(3):89-97. doi: 10.1016/j.tig.2010.12.001. Epub 2011 Jan 12. Review.


Asymmetric cell division: recent developments and their implications for tumour biology.

Knoblich JA.

Nat Rev Mol Cell Biol. 2010 Dec;11(12):849-60. doi: 10.1038/nrm3010. Review.


iCLIP predicts the dual splicing effects of TIA-RNA interactions.

Wang Z, Kayikci M, Briese M, Zarnack K, Luscombe NM, Rot G, Zupan B, Curk T, Ule J.

PLoS Biol. 2010 Oct 26;8(10):e1000530. doi: 10.1371/journal.pbio.1000530.


Neural progenitor nuclei IN motion.

Taverna E, Huttner WB.

Neuron. 2010 Sep 23;67(6):906-14. doi: 10.1016/j.neuron.2010.08.027. Review.


Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB.

Llorian M, Schwartz S, Clark TA, Hollander D, Tan LY, Spellman R, Gordon A, Schweitzer AC, de la Grange P, Ast G, Smith CW.

Nat Struct Mol Biol. 2010 Sep;17(9):1114-23. doi: 10.1038/nsmb.1881. Epub 2010 Aug 15.


Nova2 regulates neuronal migration through an RNA switch in disabled-1 signaling.

Yano M, Hayakawa-Yano Y, Mele A, Darnell RB.

Neuron. 2010 Jun 24;66(6):848-58. doi: 10.1016/j.neuron.2010.05.007.


iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution.

König J, Zarnack K, Rot G, Curk T, Kayikci M, Zupan B, Turner DJ, Luscombe NM, Ule J.

Nat Struct Mol Biol. 2010 Jul;17(7):909-15. doi: 10.1038/nsmb.1838. Epub 2010 Jul 4.


Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls.

Zhang C, Frias MA, Mele A, Ruggiu M, Eom T, Marney CB, Wang H, Licatalosi DD, Fak JJ, Darnell RB.

Science. 2010 Jul 23;329(5990):439-43. doi: 10.1126/science.1191150. Epub 2010 Jun 17.


Deciphering the splicing code.

Barash Y, Calarco JA, Gao W, Pan Q, Wang X, Shai O, Blencowe BJ, Frey BJ.

Nature. 2010 May 6;465(7294):53-9. doi: 10.1038/nature09000.


Expansion of the eukaryotic proteome by alternative splicing.

Nilsen TW, Graveley BR.

Nature. 2010 Jan 28;463(7280):457-63. doi: 10.1038/nature08909. Review.


Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy.

Du H, Cline MS, Osborne RJ, Tuttle DL, Clark TA, Donohue JP, Hall MP, Shiue L, Swanson MS, Thornton CA, Ares M Jr.

Nat Struct Mol Biol. 2010 Feb;17(2):187-93. doi: 10.1038/nsmb.1720. Epub 2010 Jan 24.


Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping.

Xue Y, Zhou Y, Wu T, Zhu T, Ji X, Kwon YS, Zhang C, Yeo G, Black DL, Sun H, Fu XD, Zhang Y.

Mol Cell. 2009 Dec 25;36(6):996-1006. doi: 10.1016/j.molcel.2009.12.003.


RNA processing: Redrawing the map of charted territory.

Corrionero A, Valcárcel J.

Mol Cell. 2009 Dec 25;36(6):918-9. doi: 10.1016/j.molcel.2009.12.004.


RNA processing and its regulation: global insights into biological networks.

Licatalosi DD, Darnell RB.

Nat Rev Genet. 2010 Jan;11(1):75-87. doi: 10.1038/nrg2673. Review.

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