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Items: 1 to 20 of 59

1.

Dynamic architecture of a minimal RNA polymerase II open promoter complex.

Treutlein B, Muschielok A, Andrecka J, Jawhari A, Buchen C, Kostrewa D, Hög F, Cramer P, Michaelis J.

Mol Cell. 2012 Apr 27;46(2):136-46. doi: 10.1016/j.molcel.2012.02.008. Epub 2012 Mar 15.

2.

Crosslinking-MS analysis reveals RNA polymerase I domain architecture and basis of rRNA cleavage.

Jennebach S, Herzog F, Aebersold R, Cramer P.

Nucleic Acids Res. 2012 Jul;40(12):5591-601. doi: 10.1093/nar/gks220. Epub 2012 Mar 6.

3.

Conservation between the RNA polymerase I, II, and III transcription initiation machineries.

Vannini A, Cramer P.

Mol Cell. 2012 Feb 24;45(4):439-46. doi: 10.1016/j.molcel.2012.01.023. Review.

5.

Mechanism of start site selection by RNA polymerase II: interplay between TFIIB and Ssl2/XPB helicase subunit of TFIIH.

Goel S, Krishnamurthy S, Hampsey M.

J Biol Chem. 2012 Jan 2;287(1):557-67. doi: 10.1074/jbc.M111.281576. Epub 2011 Nov 11.

6.

An integrated chemical cross-linking and mass spectrometry approach to study protein complex architecture and function.

Luo J, Fishburn J, Hahn S, Ranish J.

Mol Cell Proteomics. 2012 Feb;11(2):M111.008318. doi: 10.1074/mcp.M111.008318. Epub 2011 Nov 7.

7.

Architecture of the yeast RNA polymerase II open complex and regulation of activity by TFIIF.

Fishburn J, Hahn S.

Mol Cell Biol. 2012 Jan;32(1):12-25. doi: 10.1128/MCB.06242-11. Epub 2011 Oct 24.

8.

Initiation complex structure and promoter proofreading.

Liu X, Bushnell DA, Silva DA, Huang X, Kornberg RD.

Science. 2011 Jul 29;333(6042):633-7. doi: 10.1126/science.1206629.

9.

The initiation factor TFE and the elongation factor Spt4/5 compete for the RNAP clamp during transcription initiation and elongation.

Grohmann D, Nagy J, Chakraborty A, Klose D, Fielden D, Ebright RH, Michaelis J, Werner F.

Mol Cell. 2011 Jul 22;43(2):263-74. doi: 10.1016/j.molcel.2011.05.030.

10.

The TFIIF-like Rpc37/53 dimer lies at the center of a protein network to connect TFIIIC, Bdp1, and the RNA polymerase III active center.

Wu CC, Lin YC, Chen HT.

Mol Cell Biol. 2011 Jul;31(13):2715-28. doi: 10.1128/MCB.05151-11. Epub 2011 May 2.

11.

Evolution of multisubunit RNA polymerases in the three domains of life.

Werner F, Grohmann D.

Nat Rev Microbiol. 2011 Feb;9(2):85-98. doi: 10.1038/nrmicro2507. Review.

PMID:
21233849
12.

Molecular basis of RNA polymerase III transcription repression by Maf1.

Vannini A, Ringel R, Kusser AG, Berninghausen O, Kassavetis GA, Cramer P.

Cell. 2010 Oct 1;143(1):59-70. doi: 10.1016/j.cell.2010.09.002.

13.

RNA polymerase I contains a TFIIF-related DNA-binding subcomplex.

Geiger SR, Lorenzen K, Schreieck A, Hanecker P, Kostrewa D, Heck AJ, Cramer P.

Mol Cell. 2010 Aug 27;39(4):583-94. doi: 10.1016/j.molcel.2010.07.028.

14.

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry.

Chen ZA, Jawhari A, Fischer L, Buchen C, Tahir S, Kamenski T, Rasmussen M, Lariviere L, Bukowski-Wills JC, Nilges M, Cramer P, Rappsilber J.

EMBO J. 2010 Feb 17;29(4):717-26. doi: 10.1038/emboj.2009.401. Epub 2010 Jan 21.

15.

Position of the general transcription factor TFIIF within the RNA polymerase II transcription preinitiation complex.

Eichner J, Chen HT, Warfield L, Hahn S.

EMBO J. 2010 Feb 17;29(4):706-16. doi: 10.1038/emboj.2009.386. Epub 2009 Dec 24.

16.

Structure of an RNA polymerase II-TFIIB complex and the transcription initiation mechanism.

Liu X, Bushnell DA, Wang D, Calero G, Kornberg RD.

Science. 2010 Jan 8;327(5962):206-9. doi: 10.1126/science.1182015. Epub 2009 Nov 12.

17.

RNA polymerase II-TFIIB structure and mechanism of transcription initiation.

Kostrewa D, Zeller ME, Armache KJ, Seizl M, Leike K, Thomm M, Cramer P.

Nature. 2009 Nov 19;462(7271):323-30. doi: 10.1038/nature08548.

PMID:
19820686
18.

Central forkhead domain of human TFIIE beta plays a primary role in binding double-stranded DNA at transcription initiation.

Tanaka A, Watanabe T, Iida Y, Hanaoka F, Ohkuma Y.

Genes Cells. 2009 Mar;14(3):395-405. doi: 10.1111/j.1365-2443.2008.01278.x. Epub 2009 Feb 4.

19.

Protein structure modeling with MODELLER.

Eswar N, Eramian D, Webb B, Shen MY, Sali A.

Methods Mol Biol. 2008;426:145-59. doi: 10.1007/978-1-60327-058-8_8.

PMID:
18542861
20.

Transcription factor E is a part of transcription elongation complexes.

Grünberg S, Bartlett MS, Naji S, Thomm M.

J Biol Chem. 2007 Dec 7;282(49):35482-90. Epub 2007 Oct 5.

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