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Items: 1 to 20 of 68

1.

The Arabidopsis thaliana-pseudomonas syringae interaction.

Katagiri F, Thilmony R, He SY.

Arabidopsis Book. 2002;1:e0039. doi: 10.1199/tab.0039. Epub 2002 Mar 27. No abstract available.

2.

The progeny of Arabidopsis thaliana plants exposed to salt exhibit changes in DNA methylation, histone modifications and gene expression.

Bilichak A, Ilnystkyy Y, Hollunder J, Kovalchuk I.

PLoS One. 2012;7(1):e30515. doi: 10.1371/journal.pone.0030515. Epub 2012 Jan 23.

3.

The RNA silencing enzyme RNA polymerase v is required for plant immunity.

López A, Ramírez V, García-Andrade J, Flors V, Vera P.

PLoS Genet. 2011 Dec;7(12):e1002434. doi: 10.1371/journal.pgen.1002434. Epub 2011 Dec 29.

4.

Next-generation systemic acquired resistance.

Luna E, Bruce TJ, Roberts MR, Flors V, Ton J.

Plant Physiol. 2012 Feb;158(2):844-53. doi: 10.1104/pp.111.187468. Epub 2011 Dec 5.

5.

Transgenerational inheritance of an acquired small RNA-based antiviral response in C. elegans.

Rechavi O, Minevich G, Hobert O.

Cell. 2011 Dec 9;147(6):1248-56. doi: 10.1016/j.cell.2011.10.042. Epub 2011 Nov 23.

6.

Spontaneous epigenetic variation in the Arabidopsis thaliana methylome.

Becker C, Hagmann J, Müller J, Koenig D, Stegle O, Borgwardt K, Weigel D.

Nature. 2011 Sep 20;480(7376):245-9. doi: 10.1038/nature10555.

PMID:
22057020
7.

Transgenerational epigenetic instability is a source of novel methylation variants.

Schmitz RJ, Schultz MD, Lewsey MG, O'Malley RC, Urich MA, Libiger O, Schork NJ, Ecker JR.

Science. 2011 Oct 21;334(6054):369-73. doi: 10.1126/science.1212959. Epub 2011 Sep 15.

8.

An siRNA pathway prevents transgenerational retrotransposition in plants subjected to stress.

Ito H, Gaubert H, Bucher E, Mirouze M, Vaillant I, Paszkowski J.

Nature. 2011 Apr 7;472(7341):115-9. doi: 10.1038/nature09861. Epub 2011 Mar 13.

PMID:
21399627
9.

Paternally induced transgenerational environmental reprogramming of metabolic gene expression in mammals.

Carone BR, Fauquier L, Habib N, Shea JM, Hart CE, Li R, Bock C, Li C, Gu H, Zamore PD, Meissner A, Weng Z, Hofmann HA, Friedman N, Rando OJ.

Cell. 2010 Dec 23;143(7):1084-96. doi: 10.1016/j.cell.2010.12.008.

10.

Differential expression analysis for sequence count data.

Anders S, Huber W.

Genome Biol. 2010;11(10):R106. doi: 10.1186/gb-2010-11-10-r106. Epub 2010 Oct 27.

11.

Epigenetic regulation of repetitive elements is attenuated by prolonged heat stress in Arabidopsis.

Pecinka A, Dinh HQ, Baubec T, Rosa M, Lettner N, Mittelsten Scheid O.

Plant Cell. 2010 Sep;22(9):3118-29. doi: 10.1105/tpc.110.078493. Epub 2010 Sep 28.

12.

Relationship between nucleosome positioning and DNA methylation.

Chodavarapu RK, Feng S, Bernatavichute YV, Chen PY, Stroud H, Yu Y, Hetzel JA, Kuo F, Kim J, Cokus SJ, Casero D, Bernal M, Huijser P, Clark AT, Krämer U, Merchant SS, Zhang X, Jacobsen SE, Pellegrini M.

Nature. 2010 Jul 15;466(7304):388-92. doi: 10.1038/nature09147. Epub 2010 May 30.

13.

Regulation of the expression of plant resistance gene SNC1 by a protein with a conserved BAT2 domain.

Li Y, Tessaro MJ, Li X, Zhang Y.

Plant Physiol. 2010 Jul;153(3):1425-34. doi: 10.1104/pp.110.156240. Epub 2010 May 3.

14.

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.

Trapnell C, Williams BA, Pertea G, Mortazavi A, Kwan G, van Baren MJ, Salzberg SL, Wold BJ, Pachter L.

Nat Biotechnol. 2010 May;28(5):511-5. doi: 10.1038/nbt.1621. Epub 2010 May 2.

15.

Transgenerational adaptation of Arabidopsis to stress requires DNA methylation and the function of Dicer-like proteins.

Boyko A, Blevins T, Yao Y, Golubov A, Bilichak A, Ilnytskyy Y, Hollunder J, Meins F Jr, Kovalchuk I.

PLoS One. 2010 Mar 3;5(3):e9514. doi: 10.1371/journal.pone.0009514. Erratum in: PLoS One. 2010;5(4). doi: 10.1371/annotation/726f31b5-99c4-44e9-9cd6-b8d66b3f6038. Hollander, Jens [corrected to Hollunder, Jens].

16.

siRNAs and DNA methylation: seedy epigenetics.

Mosher RA, Melnyk CW.

Trends Plant Sci. 2010 Apr;15(4):204-10. doi: 10.1016/j.tplants.2010.01.002. Epub 2010 Feb 1. Review.

PMID:
20129810
17.

Stress-induced DNA methylation changes and their heritability in asexual dandelions.

Verhoeven KJ, Jansen JJ, van Dijk PJ, Biere A.

New Phytol. 2010 Mar;185(4):1108-18. doi: 10.1111/j.1469-8137.2009.03121.x. Epub 2009 Dec 14.

18.

Human DNA methylomes at base resolution show widespread epigenomic differences.

Lister R, Pelizzola M, Dowen RH, Hawkins RD, Hon G, Tonti-Filippini J, Nery JR, Lee L, Ye Z, Ngo QM, Edsall L, Antosiewicz-Bourget J, Stewart R, Ruotti V, Millar AH, Thomson JA, Ren B, Ecker JR.

Nature. 2009 Nov 19;462(7271):315-22. doi: 10.1038/nature08514. Epub 2009 Oct 14.

19.

Gene duplication and hypermutation of the pathogen Resistance gene SNC1 in the Arabidopsis bal variant.

Yi H, Richards EJ.

Genetics. 2009 Dec;183(4):1227-34. doi: 10.1534/genetics.109.105569. Epub 2009 Sep 21.

20.

Induction of RNA-directed DNA methylation upon decondensation of constitutive heterochromatin.

Schoft VK, Chumak N, Mosiolek M, Slusarz L, Komnenovic V, Brownfield L, Twell D, Kakutani T, Tamaru H.

EMBO Rep. 2009 Sep;10(9):1015-21. doi: 10.1038/embor.2009.152. Epub 2009 Aug 14.

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